RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 COL4A2P08572 1712 aa3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 CUL9Q8IWT3 2517 aa3.21□□□□□ -1.9
CDC42BPA-212ENST00000478573 SCN1AP35498 2009 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 NYNRINQ9P2P1 1898 aaKnown RBP3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 A0A0U1RQV5 110 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 A0A1W2PNU3 283 aaPredicted RBP3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 ANKRD30BLA7E2S9 258 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 C5orf67F2Z3F1 127 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 H3BTX0 84 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 MSH4O15457 936 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 LANCL1O43813 399 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 SMPD2O60906 423 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 VPS26AO75436 327 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 CTDNEP1O95476 244 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 TDP2O95551 362 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 DIRAS3O95661 229 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 SEMA4FO95754 770 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 CCNE2O96020 404 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 AK1P00568 194 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 MMP1P03956 469 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 CA3P07451 260 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 FCGR3AP08637 254 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 SLC35G4P0C7Q5 338 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 UCP1P25874 307 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 DPP4P27487 766 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 SHC1P29353 583 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 OXTRP30559 389 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 HPDP32754 393 aaPredicted RBP3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 VCPP55072 806 aaKnown RBP3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 MTTPP55157 894 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 PPIAP62937 165 aaKnown RBP3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 SP4Q02446 784 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 ACY1Q03154 408 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 ADPRMQ3LIE5 342 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 MARCH8Q5T0T0 291 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 C9orf66Q5T8R8 295 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 RIPPLY2Q5TAB7 128 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 TAF3Q5VWG9 929 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 ZNF774Q6NX45 483 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 AFTPHQ6ULP2 937 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 MISPQ8IVT2 679 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 ABHD12Q8N2K0 398 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 ZNF491Q8N8L2 437 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 NFAM1Q8NET5 270 aaPredicted RBP3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 TBCKQ8TEA7 893 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 SELENOMQ8WWX9 145 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 MCHR2Q969V1 340 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 BIRC7Q96CA5 298 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 TGS1Q96RS0 853 aaKnown RBP3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 CDX2Q99626 313 aaPredicted RBP3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 TTYH2Q9BSA4 534 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 DPH5Q9H2P9 285 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 IL1RL2Q9HB29 575 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 YAE1D1Q9NRH1 226 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 ZNF446Q9NWS9 450 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 GPR83Q9NYM4 423 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 SEC14L4Q9UDX3 406 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 MLXQ9UH92 298 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 SLC9A8Q9Y2E8 581 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 KIF3AQ9Y496 699 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 KLF2Q9Y5W3 355 aaPredicted RBP3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 CPQQ9Y646 472 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 CDH23Q9H251 3354 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 EYSQ5T1H1 3165 aa3.2□□□□□ -1.9
CDC42BPA-212ENST00000478573 TICRRQ7Z2Z1 1910 aa3.19□□□□□ -1.9
CDC42BPA-212ENST00000478573 IGKV6-21A0A0C4DH24 114 aa3.19□□□□□ -1.9
CDC42BPA-212ENST00000478573 TEX48A0A1B0GUV7 120 aa3.19□□□□□ -1.9
CDC42BPA-212ENST00000478573 LRIT2A6NDA9 550 aa3.19□□□□□ -1.9
CDC42BPA-212ENST00000478573 FOXI3A8MTJ6 420 aaPredicted RBP3.19□□□□□ -1.9
CDC42BPA-212ENST00000478573 NPIPA2E9PIF3 369 aa3.19□□□□□ -1.9
CDC42BPA-212ENST00000478573 EI24O14681 340 aa3.19□□□□□ -1.9
CDC42BPA-212ENST00000478573 NDC80O14777 642 aa3.19□□□□□ -1.9
CDC42BPA-212ENST00000478573 ALOX15BO15296 676 aa3.19□□□□□ -1.9
CDC42BPA-212ENST00000478573 SLC37A4O43826 429 aa3.19□□□□□ -1.9
CDC42BPA-212ENST00000478573 NOL3O60936 208 aaKnown RBP3.19□□□□□ -1.9
CDC42BPA-212ENST00000478573 SCGB2A1O75556 95 aa3.19□□□□□ -1.9
CDC42BPA-212ENST00000478573 LYPLA2O95372 231 aa3.19□□□□□ -1.9
CDC42BPA-212ENST00000478573 GUCA1CO95843 209 aa3.19□□□□□ -1.9
CDC42BPA-212ENST00000478573 IFNB1P01574 187 aa3.19□□□□□ -1.9
CDC42BPA-212ENST00000478573 CHRNA1P02708 482 aa3.19□□□□□ -1.9
CDC42BPA-212ENST00000478573 PPP2R1BP30154 601 aa3.19□□□□□ -1.9
CDC42BPA-212ENST00000478573 ADRA1AP35348 466 aa3.19□□□□□ -1.9
CDC42BPA-212ENST00000478573 SAA4P35542 130 aa3.19□□□□□ -1.9
CDC42BPA-212ENST00000478573 CRYBB1P53674 252 aaPredicted RBP3.19□□□□□ -1.9
CDC42BPA-212ENST00000478573 PSMC5P62195 406 aa3.19□□□□□ -1.9
CDC42BPA-212ENST00000478573 ZNF85Q03923 595 aa3.19□□□□□ -1.9
CDC42BPA-212ENST00000478573 ZP4Q12836 540 aa3.19□□□□□ -1.9
CDC42BPA-212ENST00000478573 REP15Q6BDI9 236 aa3.19□□□□□ -1.9
CDC42BPA-212ENST00000478573 DMKNQ6E0U4 476 aaPredicted RBP3.19□□□□□ -1.9
CDC42BPA-212ENST00000478573 ZNF562Q6V9R5 426 aa3.19□□□□□ -1.9
CDC42BPA-212ENST00000478573 TMUB2Q71RG4 321 aa3.19□□□□□ -1.9
CDC42BPA-212ENST00000478573 NET1Q7Z628 596 aaPredicted RBP3.19□□□□□ -1.9
CDC42BPA-212ENST00000478573 FAM228AQ86W67 206 aa3.19□□□□□ -1.9
CDC42BPA-212ENST00000478573 LRRC49Q8IUZ0 686 aa3.19□□□□□ -1.9
CDC42BPA-212ENST00000478573 CCDC36Q8IYA8 594 aa3.19□□□□□ -1.9
CDC42BPA-212ENST00000478573 MYOCDQ8IZQ8 938 aa3.19□□□□□ -1.9
CDC42BPA-212ENST00000478573 CSNK1G2-AS1Q8NCQ2 148 aa3.19□□□□□ -1.9
CDC42BPA-212ENST00000478573 C17orf47Q8NEP4 570 aa3.19□□□□□ -1.9
CDC42BPA-212ENST00000478573 DNAJB3Q8WWF6 145 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms