RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 PORP16435 677 aaPredicted RBP4.08□□□□□ -1.76
CKS1B-207ENST00000477676 NAGAP17050 411 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 SRD5A2P31213 254 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 TLX1P31314 330 aaPredicted RBP4.08□□□□□ -1.76
CKS1B-207ENST00000477676 HPDP32754 393 aaPredicted RBP4.08□□□□□ -1.76
CKS1B-207ENST00000477676 FEN1P39748 380 aaKnown RBP4.08□□□□□ -1.76
CKS1B-207ENST00000477676 SLC6A8P48029 635 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 ANXA11P50995 505 aaKnown RBP4.08□□□□□ -1.76
CKS1B-207ENST00000477676 XKP51811 444 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 RAP1GDS1P52306 607 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 GPX6P59796 221 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 SIRPAP78324 504 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 PDIA2Q13087 525 aaKnown RBP4.08□□□□□ -1.76
CKS1B-207ENST00000477676 GAB1Q13480 694 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 SF3B4Q15427 424 aaKnown RBP eCLIP4.08□□□□□ -1.764e-8■□□□□ 8.6
CKS1B-207ENST00000477676 HIST2H2ACQ16777 129 aaPredicted RBP4.08□□□□□ -1.76
CKS1B-207ENST00000477676 KRTAP24-1Q3LI83 254 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 TRMT12Q53H54 448 aaKnown RBP4.08□□□□□ -1.76
CKS1B-207ENST00000477676 CT45A2Q5DJT8 189 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 MTX3Q5HYI7 312 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 PAGE2BQ5JRK9 111 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 UBAP2Q5T6F2 1119 aaKnown RBP4.08□□□□□ -1.76
CKS1B-207ENST00000477676 HIST2H2AA3Q6FI13 130 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 OR52E8Q6IFG1 317 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 SLC30A6Q6NXT4 461 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 STAC2Q6ZMT1 411 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 ZNF704Q6ZNC4 412 aaPredicted RBP4.08□□□□□ -1.76
CKS1B-207ENST00000477676 SH2D5Q6ZV89 423 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 PLEKHM3Q6ZWE6 761 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 RPS27LQ71UM5 84 aaKnown RBP4.08□□□□□ -1.76
CKS1B-207ENST00000477676 NUP54Q7Z3B4 507 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 IFNEQ86WN2 208 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 PLCZ1Q86YW0 608 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 HIPK1Q86Z02 1210 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 GRAMD2AQ8IUY3 354 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 UBQLNLQ8IYU4 475 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 PDIK1LQ8N165 341 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 SLC35F6Q8N357 371 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 TEX9Q8N6V9 391 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 CNEP1R1Q8N9A8 125 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 FADS6Q8N9I5 356 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 L3MBTL4Q8NA19 623 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 SEMA6DQ8NFY4 1073 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 OR7G1Q8NGA0 311 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 OR4N2Q8NGD1 307 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 OR52B6Q8NGF0 335 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 OR5M1Q8NGP8 315 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 OR14L1PQ8NHC6 308 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 FNDC9Q8TBE3 224 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 GRK7Q8WTQ7 553 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 JADE3Q92613 823 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 TMBIM1Q969X1 311 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 ZBTB9Q96C00 473 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 NXNL1Q96CM4 212 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 LRRC39Q96DD0 335 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 C1GALT1C1Q96EU7 318 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 CNRIP1Q96F85 164 aaPredicted RBP4.08□□□□□ -1.76
CKS1B-207ENST00000477676 ZNF681Q96N22 645 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 GPR78Q96P69 363 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 FAM111AQ96PZ2 611 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 RBBP8Q99708 897 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 PELOQ9BRX2 385 aaKnown RBP4.08□□□□□ -1.76
CKS1B-207ENST00000477676 MED18Q9BUE0 208 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 MRPL1Q9BYD6 325 aaKnown RBP4.08□□□□□ -1.76
CKS1B-207ENST00000477676 METTL7AQ9H8H3 244 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 ACTR8Q9H981 624 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 RNF122Q9H9V4 155 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 ZBTB26Q9HCK0 441 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 LYARQ9NX58 379 aaKnown RBP4.08□□□□□ -1.76
CKS1B-207ENST00000477676 MS4A12Q9NXJ0 267 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 NUDT4Q9NZJ9 180 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 OPTCQ9UBM4 332 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 DLGAP4Q9Y2H0 992 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 MRPS18CQ9Y3D5 142 aaKnown RBP4.08□□□□□ -1.76
CKS1B-207ENST00000477676 ZNF337Q9Y3M9 751 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 JRKLQ9Y4A0 524 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 SPACA6W5XKT8 324 aa4.08□□□□□ -1.76
CKS1B-207ENST00000477676 NOTCH1P46531 2555 aa4.07□□□□□ -1.76
CKS1B-207ENST00000477676 TCRBV9S1A1TA0A576 114 aa4.07□□□□□ -1.76
CKS1B-207ENST00000477676 OR2M5A3KFT3 312 aa4.07□□□□□ -1.76
CKS1B-207ENST00000477676 OR6C70A6NIJ9 312 aa4.07□□□□□ -1.76
CKS1B-207ENST00000477676 SLC22A20A6NK97 555 aa4.07□□□□□ -1.76
CKS1B-207ENST00000477676 SUPT3HB4E1H0 165 aa4.07□□□□□ -1.76
CKS1B-207ENST00000477676 C16orf97H3BN30 126 aa4.07□□□□□ -1.76
CKS1B-207ENST00000477676 PPP6CO00743 305 aa4.07□□□□□ -1.76
CKS1B-207ENST00000477676 CES2O00748 559 aa4.07□□□□□ -1.76
CKS1B-207ENST00000477676 HS3ST1O14792 307 aa4.07□□□□□ -1.76
CKS1B-207ENST00000477676 PHF1O43189 567 aaPredicted RBP4.07□□□□□ -1.76
CKS1B-207ENST00000477676 EMC8O43402 210 aa4.07□□□□□ -1.76
CKS1B-207ENST00000477676 FADS1O60427 444 aa4.07□□□□□ -1.76
CKS1B-207ENST00000477676 KERAO60938 352 aa4.07□□□□□ -1.76
CKS1B-207ENST00000477676 SUPT3HO75486 399 aa4.07□□□□□ -1.76
CKS1B-207ENST00000477676 NTN1O95631 604 aa4.07□□□□□ -1.76
CKS1B-207ENST00000477676 CD8AP01732 235 aa4.07□□□□□ -1.76
CKS1B-207ENST00000477676 IGHV4-39P01824 125 aa4.07□□□□□ -1.76
CKS1B-207ENST00000477676 CRHP06850 196 aa4.07□□□□□ -1.76
CKS1B-207ENST00000477676 KLK1P06870 262 aa4.07□□□□□ -1.76
CKS1B-207ENST00000477676 DANCRP0C864 163 aa4.07□□□□□ -1.76
CKS1B-207ENST00000477676 STMN1P16949 149 aa4.07□□□□□ -1.76
CKS1B-207ENST00000477676 RHCEP18577 417 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms