RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 VDAC3Q9Y277 283 aa13.92□□□□□ -0.18
SEC13-215ENST00000477547 M0R3H8 397 aa13.91□□□□□ -0.18
SEC13-215ENST00000477547 AP3D1O14617 1153 aa13.91□□□□□ -0.18
SEC13-215ENST00000477547 TRAPPC6AO75865 159 aa13.91□□□□□ -0.18
SEC13-215ENST00000477547 STAMBPO95630 424 aa13.91□□□□□ -0.18
SEC13-215ENST00000477547 EPPINO95925 133 aa13.91□□□□□ -0.18
SEC13-215ENST00000477547 CELA3AP09093 270 aa13.91□□□□□ -0.18
SEC13-215ENST00000477547 GKN3PP0CG01 181 aa13.91□□□□□ -0.18
SEC13-215ENST00000477547 UQCRBP14927 111 aa13.91□□□□□ -0.18
SEC13-215ENST00000477547 DPP4P27487 766 aa13.91□□□□□ -0.18
SEC13-215ENST00000477547 SRD5A2P31213 254 aa13.91□□□□□ -0.18
SEC13-215ENST00000477547 RYKP34925 604 aa13.91□□□□□ -0.18
SEC13-215ENST00000477547 SLC6A8P48029 635 aa13.91□□□□□ -0.18
SEC13-215ENST00000477547 DSCR4P56555 118 aaPredicted RBP13.91□□□□□ -0.18
SEC13-215ENST00000477547 ELOAQ14241 798 aaKnown RBP13.91□□□□□ -0.18
SEC13-215ENST00000477547 TRIM25Q14258 630 aaKnown RBP13.91□□□□□ -0.18
SEC13-215ENST00000477547 DUSP7Q16829 419 aa13.91□□□□□ -0.18
SEC13-215ENST00000477547 LCN8Q6JVE9 175 aa13.91□□□□□ -0.18
SEC13-215ENST00000477547 ARSKQ6UWY0 536 aa13.91□□□□□ -0.18
SEC13-215ENST00000477547 CYP2R1Q6VVX0 501 aa13.91□□□□□ -0.18
SEC13-215ENST00000477547 ZNF550Q7Z398 422 aa13.91□□□□□ -0.18
SEC13-215ENST00000477547 YTHDF3Q7Z739 585 aaKnown RBP13.91□□□□□ -0.18
SEC13-215ENST00000477547 ZGRF1Q86YA3 2104 aa13.91□□□□□ -0.18
SEC13-215ENST00000477547 OR14L1PQ8NHC6 308 aa13.91□□□□□ -0.18
SEC13-215ENST00000477547 VANGL1Q8TAA9 524 aaPredicted RBP13.91□□□□□ -0.18
SEC13-215ENST00000477547 LZICQ8WZA0 190 aa13.91□□□□□ -0.18
SEC13-215ENST00000477547 NR4A3Q92570 626 aa13.91□□□□□ -0.18
SEC13-215ENST00000477547 SNRNP40Q96DI7 357 aaKnown RBP13.91□□□□□ -0.18
SEC13-215ENST00000477547 HSH2DQ96JZ2 352 aa13.91□□□□□ -0.18
SEC13-215ENST00000477547 OR2B2Q9GZK3 357 aa13.91□□□□□ -0.18
SEC13-215ENST00000477547 SLC6A15Q9H2J7 730 aa13.91□□□□□ -0.18
SEC13-215ENST00000477547 ZDHHC11Q9H8X9 412 aa13.91□□□□□ -0.18
SEC13-215ENST00000477547 ACTR3BQ9P1U1 418 aa13.91□□□□□ -0.18
SEC13-215ENST00000477547 RPS6KA6Q9UK32 745 aa13.91□□□□□ -0.18
SEC13-215ENST00000477547 SAMD4AQ9UPU9 718 aaKnown RBP13.91□□□□□ -0.18
SEC13-215ENST00000477547 LIPGQ9Y5X9 500 aa13.91□□□□□ -0.18
SEC13-215ENST00000477547 V9GYQ6 96 aa13.91□□□□□ -0.18
SEC13-215ENST00000477547 CFAP73A6NFT4 308 aa13.9□□□□□ -0.18
SEC13-215ENST00000477547 NPIPA5E9PKD4 350 aa13.9□□□□□ -0.18
SEC13-215ENST00000477547 ADAM11O75078 769 aa13.9□□□□□ -0.18
SEC13-215ENST00000477547 FESP07332 822 aa13.9□□□□□ -0.18
SEC13-215ENST00000477547 HK1P19367 917 aa13.9□□□□□ -0.18
SEC13-215ENST00000477547 PGCP20142 388 aa13.9□□□□□ -0.18
SEC13-215ENST00000477547 EPS8Q12929 822 aa13.9□□□□□ -0.18
SEC13-215ENST00000477547 QPRTQ15274 297 aa13.9□□□□□ -0.18
SEC13-215ENST00000477547 NRF1Q16656 503 aa13.9□□□□□ -0.18
SEC13-215ENST00000477547 PLPPR5Q32ZL2 321 aa13.9□□□□□ -0.18
SEC13-215ENST00000477547 CMPK2Q5EBM0 449 aa13.9□□□□□ -0.18
SEC13-215ENST00000477547 RAET1LQ5VY80 246 aa13.9□□□□□ -0.18
SEC13-215ENST00000477547 PGM2L1Q6PCE3 622 aa13.9□□□□□ -0.18
SEC13-215ENST00000477547 CBLL1Q75N03 491 aa13.9□□□□□ -0.18
SEC13-215ENST00000477547 DHFR2Q86XF0 187 aa13.9□□□□□ -0.18
SEC13-215ENST00000477547 SPPL2CQ8IUH8 684 aa13.9□□□□□ -0.18
SEC13-215ENST00000477547 SIAH3Q8IW03 269 aa13.9□□□□□ -0.18
SEC13-215ENST00000477547 EID3Q8N140 333 aa13.9□□□□□ -0.18
SEC13-215ENST00000477547 FAM26EQ8N5C1 309 aa13.9□□□□□ -0.18
SEC13-215ENST00000477547 FAM83FQ8NEG4 500 aaPredicted RBP13.9□□□□□ -0.18
SEC13-215ENST00000477547 OR10Q1Q8NGQ4 319 aa13.9□□□□□ -0.18
SEC13-215ENST00000477547 SLC35B4Q969S0 331 aa13.9□□□□□ -0.18
SEC13-215ENST00000477547 ARHGDIGQ99819 225 aa13.9□□□□□ -0.18
SEC13-215ENST00000477547 TRIM15Q9C019 465 aa13.9□□□□□ -0.18
SEC13-215ENST00000477547 MMADHCQ9H3L0 296 aaPredicted RBP13.9□□□□□ -0.18
SEC13-215ENST00000477547 GORASP2Q9H8Y8 452 aa13.9□□□□□ -0.18
SEC13-215ENST00000477547 AGPAT4Q9NRZ5 378 aa13.9□□□□□ -0.18
SEC13-215ENST00000477547 MED17Q9NVC6 651 aa13.9□□□□□ -0.18
SEC13-215ENST00000477547 ASF1BQ9NVP2 202 aa13.9□□□□□ -0.18
SEC13-215ENST00000477547 TAS2R10Q9NYW0 307 aa13.9□□□□□ -0.18
SEC13-215ENST00000477547 TESQ9UGI8 421 aaKnown RBP13.9□□□□□ -0.18
SEC13-215ENST00000477547 SLC7A8Q9UHI5 535 aa13.9□□□□□ -0.18
SEC13-215ENST00000477547 NPIPA1Q9UND3 350 aa13.9□□□□□ -0.18
SEC13-215ENST00000477547 SLC9A8Q9Y2E8 581 aa13.9□□□□□ -0.18
SEC13-215ENST00000477547 ICE1Q9Y2F5 2266 aa13.9□□□□□ -0.18
SEC13-215ENST00000477547 GTF3C1Q12789 2109 aa13.9□□□□□ -0.18
SEC13-215ENST00000477547 A0A087WZY1 265 aa13.9□□□□□ -0.19
SEC13-215ENST00000477547 ERICH4A6NGS2 130 aa13.9□□□□□ -0.19
SEC13-215ENST00000477547 LGI1O95970 557 aa13.9□□□□□ -0.19
SEC13-215ENST00000477547 HPNP05981 417 aa13.9□□□□□ -0.19
SEC13-215ENST00000477547 C8BP07358 591 aa13.9□□□□□ -0.19
SEC13-215ENST00000477547 LINGO3P0C6S8 592 aa13.9□□□□□ -0.19
SEC13-215ENST00000477547 PRG2P13727 222 aa13.9□□□□□ -0.19
SEC13-215ENST00000477547 TNFRSF1BP20333 461 aa13.9□□□□□ -0.19
SEC13-215ENST00000477547 MST1P26927 711 aa13.9□□□□□ -0.19
SEC13-215ENST00000477547 FOXF1Q12946 379 aa13.9□□□□□ -0.19
SEC13-215ENST00000477547 FLOT2Q14254 428 aa13.9□□□□□ -0.19
SEC13-215ENST00000477547 MTX3Q5HYI7 312 aa13.9□□□□□ -0.19
SEC13-215ENST00000477547 WIPI1Q5MNZ9 446 aaPredicted RBP13.9□□□□□ -0.19
SEC13-215ENST00000477547 VTCN1Q7Z7D3 282 aa13.9□□□□□ -0.19
SEC13-215ENST00000477547 YRDCQ86U90 279 aaKnown RBP13.9□□□□□ -0.19
SEC13-215ENST00000477547 RANBP3LQ86VV4 465 aaPredicted RBP13.9□□□□□ -0.19
SEC13-215ENST00000477547 CARM1Q86X55 608 aa13.9□□□□□ -0.19
SEC13-215ENST00000477547 ZNF563Q8TA94 476 aa13.9□□□□□ -0.19
SEC13-215ENST00000477547 GPR119Q8TDV5 335 aa13.9□□□□□ -0.19
SEC13-215ENST00000477547 FAR1Q8WVX9 515 aa13.9□□□□□ -0.19
SEC13-215ENST00000477547 GEMIN6Q8WXD5 167 aaKnown RBP13.9□□□□□ -0.19
SEC13-215ENST00000477547 LRGUKQ96M69 825 aa13.9□□□□□ -0.19
SEC13-215ENST00000477547 DEFB127Q9H1M4 99 aa13.9□□□□□ -0.19
SEC13-215ENST00000477547 EXO5Q9H790 373 aa13.9□□□□□ -0.19
SEC13-215ENST00000477547 EVA1AQ9H8M9 152 aa13.9□□□□□ -0.19
SEC13-215ENST00000477547 DCAF13Q9NV06 445 aaKnown RBP13.9□□□□□ -0.19
SEC13-215ENST00000477547 RPH3AQ9Y2J0 694 aaPredicted RBP13.9□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms