RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 FRKP42685 505 aaPredicted RBP10.53□□□□□ -0.72
HDAC6-219ENST00000476625 GSTM5P46439 218 aa10.53□□□□□ -0.72
HDAC6-219ENST00000476625 FABP6P51161 128 aa10.53□□□□□ -0.72
HDAC6-219ENST00000476625 CCR4P51679 360 aa10.53□□□□□ -0.72
HDAC6-219ENST00000476625 RPL38P63173 70 aaKnown RBP10.53□□□□□ -0.72
HDAC6-219ENST00000476625 GGTLC2Q14390 218 aa10.53□□□□□ -0.72
HDAC6-219ENST00000476625 QPRTQ15274 297 aa10.53□□□□□ -0.72
HDAC6-219ENST00000476625 NRF1Q16656 503 aa10.53□□□□□ -0.72
HDAC6-219ENST00000476625 ELOA3BQ3SY89 546 aa10.53□□□□□ -0.72
HDAC6-219ENST00000476625 FAM120AOSQ5T036 256 aa10.53□□□□□ -0.72
HDAC6-219ENST00000476625 AGAP6Q5VW22 663 aa10.53□□□□□ -0.72
HDAC6-219ENST00000476625 SLC22A25Q6T423 547 aa10.53□□□□□ -0.72
HDAC6-219ENST00000476625 TRIM46Q7Z4K8 759 aa10.53□□□□□ -0.72
HDAC6-219ENST00000476625 HMGN2P46Q86SG4 172 aa10.53□□□□□ -0.72
HDAC6-219ENST00000476625 RELL1Q8IUW5 271 aa10.53□□□□□ -0.72
HDAC6-219ENST00000476625 MUC15Q8N387 334 aa10.53□□□□□ -0.72
HDAC6-219ENST00000476625 ELOA3Q8NG57 546 aa10.53□□□□□ -0.72
HDAC6-219ENST00000476625 OR6Y1Q8NGX8 325 aa10.53□□□□□ -0.72
HDAC6-219ENST00000476625 FAM168AQ92567 244 aa10.53□□□□□ -0.72
HDAC6-219ENST00000476625 PPCDCQ96CD2 204 aa10.53□□□□□ -0.72
HDAC6-219ENST00000476625 MRGPRX4Q96LA9 322 aa10.53□□□□□ -0.72
HDAC6-219ENST00000476625 OR5B2Q96R09 309 aa10.53□□□□□ -0.72
HDAC6-219ENST00000476625 DHRS9Q9BPW9 319 aa10.53□□□□□ -0.72
HDAC6-219ENST00000476625 PRR14Q9BWN1 585 aa10.53□□□□□ -0.72
HDAC6-219ENST00000476625 TUBB1Q9H4B7 451 aa10.53□□□□□ -0.72
HDAC6-219ENST00000476625 ZCCHC3Q9NUD5 404 aaKnown RBP10.53□□□□□ -0.72
HDAC6-219ENST00000476625 POU2F3Q9UKI9 436 aa10.53□□□□□ -0.72
HDAC6-219ENST00000476625 NFU1Q9UMS0 254 aa10.53□□□□□ -0.72
HDAC6-219ENST00000476625 NBEAL1Q6ZS30 2694 aa10.52□□□□□ -0.72
HDAC6-219ENST00000476625 A0A087WUV0 522 aaPredicted RBP10.52□□□□□ -0.73
HDAC6-219ENST00000476625 OR5H1A6NKK0 313 aa10.52□□□□□ -0.73
HDAC6-219ENST00000476625 TMEM233B4DJY2 109 aa10.52□□□□□ -0.73
HDAC6-219ENST00000476625 RGS14O43566 566 aa10.52□□□□□ -0.73
HDAC6-219ENST00000476625 CYTIPO60759 359 aa10.52□□□□□ -0.73
HDAC6-219ENST00000476625 PABPC4LP0CB38 370 aaKnown RBP10.52□□□□□ -0.73
HDAC6-219ENST00000476625 SRD5A1P18405 259 aa10.52□□□□□ -0.73
HDAC6-219ENST00000476625 CD40P25942 277 aa10.52□□□□□ -0.73
HDAC6-219ENST00000476625 P2RX1P51575 399 aa10.52□□□□□ -0.73
HDAC6-219ENST00000476625 RPS26P62854 115 aaKnown RBP10.52□□□□□ -0.73
HDAC6-219ENST00000476625 RAB35Q15286 201 aa10.52□□□□□ -0.73
HDAC6-219ENST00000476625 VPS26BQ4G0F5 336 aa10.52□□□□□ -0.73
HDAC6-219ENST00000476625 RFTN2Q52LD8 501 aaPredicted RBP10.52□□□□□ -0.73
HDAC6-219ENST00000476625 KLHL26Q53HC5 615 aa10.52□□□□□ -0.73
HDAC6-219ENST00000476625 TIMM23BQ5SRD1 257 aa10.52□□□□□ -0.73
HDAC6-219ENST00000476625 LIPMQ5VYY2 423 aa10.52□□□□□ -0.73
HDAC6-219ENST00000476625 CYB5R2Q6BCY4 276 aa10.52□□□□□ -0.73
HDAC6-219ENST00000476625 FRMD7Q6ZUT3 714 aa10.52□□□□□ -0.73
HDAC6-219ENST00000476625 IKBIPQ70UQ0 350 aa10.52□□□□□ -0.73
HDAC6-219ENST00000476625 CLEC4FQ8N1N0 589 aa10.52□□□□□ -0.73
HDAC6-219ENST00000476625 UBE2J2Q8N2K1 259 aa10.52□□□□□ -0.73
HDAC6-219ENST00000476625 OR7A2PQ8NGA2 310 aa10.52□□□□□ -0.73
HDAC6-219ENST00000476625 OR52E4Q8NGH9 312 aa10.52□□□□□ -0.73
HDAC6-219ENST00000476625 OR5D16Q8NGK9 328 aa10.52□□□□□ -0.73
HDAC6-219ENST00000476625 OR5AK3PQ8NH89 298 aa10.52□□□□□ -0.73
HDAC6-219ENST00000476625 MZB1Q8WU39 189 aa10.52□□□□□ -0.73
HDAC6-219ENST00000476625 MSI2Q96DH6 328 aaKnown RBP10.52□□□□□ -0.73
HDAC6-219ENST00000476625 BTBD2Q9BX70 525 aa10.52□□□□□ -0.73
HDAC6-219ENST00000476625 REEP4Q9H6H4 257 aa10.52□□□□□ -0.73
HDAC6-219ENST00000476625 FAIMQ9NVQ4 179 aa10.52□□□□□ -0.73
HDAC6-219ENST00000476625 NTMQ9P121 344 aa10.52□□□□□ -0.73
HDAC6-219ENST00000476625 TBK1Q9UHD2 729 aa10.52□□□□□ -0.73
HDAC6-219ENST00000476625 KCNE5Q9UJ90 142 aa10.52□□□□□ -0.73
HDAC6-219ENST00000476625 SNX8Q9Y5X2 465 aa10.52□□□□□ -0.73
HDAC6-219ENST00000476625 SLC25A15Q9Y619 301 aa10.52□□□□□ -0.73
HDAC6-219ENST00000476625 ATP23Q9Y6H3 246 aa10.52□□□□□ -0.73
HDAC6-219ENST00000476625 ARFGEF3Q5TH69 2177 aa10.51□□□□□ -0.73
HDAC6-219ENST00000476625 IGHV4-61A0A0C4DH41 118 aa10.51□□□□□ -0.73
HDAC6-219ENST00000476625 GOLGA8QA0A0J9YX86 632 aa10.51□□□□□ -0.73
HDAC6-219ENST00000476625 GOLGA8OA6NCC3 632 aa10.51□□□□□ -0.73
HDAC6-219ENST00000476625 GOLGA8NF8WBI6 632 aa10.51□□□□□ -0.73
HDAC6-219ENST00000476625 CRCPO75575 148 aa10.51□□□□□ -0.73
HDAC6-219ENST00000476625 CYP7B1O75881 506 aa10.51□□□□□ -0.73
HDAC6-219ENST00000476625 PGM3O95394 542 aa10.51□□□□□ -0.73
HDAC6-219ENST00000476625 ITGA5P08648 1049 aa10.51□□□□□ -0.73
HDAC6-219ENST00000476625 LINC00032P0C843 101 aa10.51□□□□□ -0.73
HDAC6-219ENST00000476625 SLC7A1P30825 629 aa10.51□□□□□ -0.73
HDAC6-219ENST00000476625 LSM11P83369 360 aaKnown RBP eCLIP10.51□□□□□ -0.73
HDAC6-219ENST00000476625 SELENBP1Q13228 472 aa10.51□□□□□ -0.73
HDAC6-219ENST00000476625 PDE7AQ13946 482 aa10.51□□□□□ -0.73
HDAC6-219ENST00000476625 CARTPTQ16568 116 aa10.51□□□□□ -0.73
HDAC6-219ENST00000476625 GALNTL6Q49A17 601 aa10.51□□□□□ -0.73
HDAC6-219ENST00000476625 TIGD2Q4W5G0 525 aa10.51□□□□□ -0.73
HDAC6-219ENST00000476625 DCST2Q5T1A1 773 aa10.51□□□□□ -0.73
HDAC6-219ENST00000476625 PDZK1Q5T2W1 519 aa10.51□□□□□ -0.73
HDAC6-219ENST00000476625 ZYG11AQ6WRX3 759 aa10.51□□□□□ -0.73
HDAC6-219ENST00000476625 TIFABQ6ZNK6 161 aa10.51□□□□□ -0.73
HDAC6-219ENST00000476625 SLC22A9Q8IVM8 553 aa10.51□□□□□ -0.73
HDAC6-219ENST00000476625 MISPQ8IVT2 679 aa10.51□□□□□ -0.73
HDAC6-219ENST00000476625 ZNF100Q8IYN0 542 aa10.51□□□□□ -0.73
HDAC6-219ENST00000476625 FBXL14Q8N1E6 418 aa10.51□□□□□ -0.73
HDAC6-219ENST00000476625 ANKS4BQ8N8V4 417 aa10.51□□□□□ -0.73
HDAC6-219ENST00000476625 WDR31Q8NA23 367 aa10.51□□□□□ -0.73
HDAC6-219ENST00000476625 ZNF527Q8NB42 609 aa10.51□□□□□ -0.73
HDAC6-219ENST00000476625 CEP70Q8NHQ1 597 aa10.51□□□□□ -0.73
HDAC6-219ENST00000476625 MUCL1Q96DR8 90 aa10.51□□□□□ -0.73
HDAC6-219ENST00000476625 FCRL1Q96LA6 429 aa10.51□□□□□ -0.73
HDAC6-219ENST00000476625 SORCS2Q96PQ0 1159 aa10.51□□□□□ -0.73
HDAC6-219ENST00000476625 FMO2Q99518 471 aa10.51□□□□□ -0.73
HDAC6-219ENST00000476625 THUMPD3Q9BV44 507 aaKnown RBP10.51□□□□□ -0.73
HDAC6-219ENST00000476625 AMBRA1Q9C0C7 1298 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms