RNA–Protein interactions for RNA: ENST00000476289.5

CHKB-207, Transcript of choline kinase beta, humanhuman

TSL 5

Gene CHKB, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-207ENST00000476289 ATAD3BQ5T9A4 648 aa28.8■■■□□ 2.2
CHKB-207ENST00000476289 TYW3Q6IPR3 259 aaKnown RBP28.8■■■□□ 2.2
CHKB-207ENST00000476289 TOR1AIP2Q8NFQ8 470 aa28.8■■■□□ 2.2
CHKB-207ENST00000476289 OR6K3Q8NGY3 331 aa28.8■■■□□ 2.2
CHKB-207ENST00000476289 MAELQ96JY0 434 aaKnown RBP28.8■■■□□ 2.2
CHKB-207ENST00000476289 MARK4Q96L34 752 aa28.8■■■□□ 2.2
CHKB-207ENST00000476289 MRGPRX4Q96LA9 322 aa28.8■■■□□ 2.2
CHKB-207ENST00000476289 WFIKKN1Q96NZ8 548 aa28.8■■■□□ 2.2
CHKB-207ENST00000476289 SRXN1Q9BYN0 137 aa28.8■■■□□ 2.2
CHKB-207ENST00000476289 KLHL28Q9NXS3 571 aa28.8■■■□□ 2.2
CHKB-207ENST00000476289 ELOVL5Q9NYP7 299 aa28.8■■■□□ 2.2
CHKB-207ENST00000476289 PRAMEF27A3QJZ7 478 aa28.79■■■□□ 2.2
CHKB-207ENST00000476289 SLCO1B7G3V0H7 640 aa28.79■■■□□ 2.2
CHKB-207ENST00000476289 AGR2O95994 175 aa28.79■■■□□ 2.2
CHKB-207ENST00000476289 KCNJ5P48544 419 aa28.79■■■□□ 2.2
CHKB-207ENST00000476289 SLC25A53Q5H9E4 307 aa28.79■■■□□ 2.2
CHKB-207ENST00000476289 PDSS1Q5T2R2 415 aa28.79■■■□□ 2.2
CHKB-207ENST00000476289 NXNQ6DKJ4 435 aa28.79■■■□□ 2.2
CHKB-207ENST00000476289 ROBO4Q8WZ75 1007 aa28.79■■■□□ 2.2
CHKB-207ENST00000476289 ARL8AQ96BM9 186 aa28.79■■■□□ 2.2
CHKB-207ENST00000476289 ROPN1LQ96C74 230 aa28.79■■■□□ 2.2
CHKB-207ENST00000476289 OR52E6Q96RD3 313 aa28.79■■■□□ 2.2
CHKB-207ENST00000476289 SLC39A3Q9BRY0 314 aa28.79■■■□□ 2.2
CHKB-207ENST00000476289 LAT2Q9GZY6 243 aa28.79■■■□□ 2.2
CHKB-207ENST00000476289 COQ10BQ9H8M1 238 aa28.79■■■□□ 2.2
CHKB-207ENST00000476289 PLEKHF2Q9H8W4 249 aa28.79■■■□□ 2.2
CHKB-207ENST00000476289 WDR45Q9Y484 360 aa28.79■■■□□ 2.2
CHKB-207ENST00000476289 MED13LQ71F56 2210 aa28.79■■■□□ 2.2
CHKB-207ENST00000476289 CCDC154A6NI56 674 aa28.78■■■□□ 2.2
CHKB-207ENST00000476289 ETV2O00321 342 aaPredicted RBP28.78■■■□□ 2.2
CHKB-207ENST00000476289 BCAS1O75363 584 aaPredicted RBP28.78■■■□□ 2.2
CHKB-207ENST00000476289 CYP7B1O75881 506 aa28.78■■■□□ 2.2
CHKB-207ENST00000476289 CTBP2P56545 445 aa28.78■■■□□ 2.2
CHKB-207ENST00000476289 CARD18P57730 90 aa28.78■■■□□ 2.2
CHKB-207ENST00000476289 CBFBQ13951 182 aa28.78■■■□□ 2.2
CHKB-207ENST00000476289 ZNF239Q16600 458 aaKnown RBP28.78■■■□□ 2.2
CHKB-207ENST00000476289 PAMR1Q6UXH9 720 aa28.78■■■□□ 2.2
CHKB-207ENST00000476289 FRRS1Q6ZNA5 592 aa28.78■■■□□ 2.2
CHKB-207ENST00000476289 RNF130Q86XS8 419 aa28.78■■■□□ 2.2
CHKB-207ENST00000476289 ATP6V1C2Q8NEY4 427 aa28.78■■■□□ 2.2
CHKB-207ENST00000476289 PANX1Q96RD7 426 aa28.78■■■□□ 2.2
CHKB-207ENST00000476289 THUMPD3Q9BV44 507 aaKnown RBP28.78■■■□□ 2.2
CHKB-207ENST00000476289 PLSCR4Q9NRQ2 329 aa28.78■■■□□ 2.2
CHKB-207ENST00000476289 HMGN4O00479 90 aa28.77■■■□□ 2.2
CHKB-207ENST00000476289 SIAH2O43255 324 aa28.77■■■□□ 2.2
CHKB-207ENST00000476289 DNAJA2O60884 412 aa28.77■■■□□ 2.2
CHKB-207ENST00000476289 CSTAP01040 98 aa28.77■■■□□ 2.2
CHKB-207ENST00000476289 GUSBP08236 651 aa28.77■■■□□ 2.2
CHKB-207ENST00000476289 UBTFL6P0CB48 400 aaPredicted RBP28.77■■■□□ 2.2
CHKB-207ENST00000476289 CD1EP15812 388 aa28.77■■■□□ 2.2
CHKB-207ENST00000476289 EXOC3L2Q2M3D2 409 aa28.77■■■□□ 2.2
CHKB-207ENST00000476289 TMEM176BQ3YBM2 270 aaPredicted RBP28.77■■■□□ 2.2
CHKB-207ENST00000476289 HMGN2P46Q86SG4 172 aa28.77■■■□□ 2.2
CHKB-207ENST00000476289 SAP130Q9H0E3 1048 aa28.77■■■□□ 2.2
CHKB-207ENST00000476289 POLE3Q9NRF9 147 aa28.77■■■□□ 2.2
CHKB-207ENST00000476289 PRRC2AP48634 2157 aaKnown RBP28.77■■■□□ 2.2
CHKB-207ENST00000476289 CASKO14936 926 aa28.76■■■□□ 2.19
CHKB-207ENST00000476289 GSNP06396 782 aa28.76■■■□□ 2.19
CHKB-207ENST00000476289 SELENBP1Q13228 472 aa28.76■■■□□ 2.19
CHKB-207ENST00000476289 AP1ARQ63HQ0 302 aa28.76■■■□□ 2.19
CHKB-207ENST00000476289 EIF3MQ7L2H7 374 aaKnown RBP28.76■■■□□ 2.19
CHKB-207ENST00000476289 ZNF550Q7Z398 422 aa28.76■■■□□ 2.19
CHKB-207ENST00000476289 ZNF619Q8N2I2 560 aa28.76■■■□□ 2.19
CHKB-207ENST00000476289 FAM71CQ8NEG0 241 aa28.76■■■□□ 2.19
CHKB-207ENST00000476289 RNF128Q8TEB7 428 aa28.76■■■□□ 2.19
CHKB-207ENST00000476289 ZFP90Q8TF47 636 aa28.76■■■□□ 2.19
CHKB-207ENST00000476289 ABHD3Q8WU67 409 aa28.76■■■□□ 2.19
CHKB-207ENST00000476289 ZNF75CPQ92670 426 aaPredicted RBP28.76■■■□□ 2.19
CHKB-207ENST00000476289 ZG16BQ96DA0 208 aa28.76■■■□□ 2.19
CHKB-207ENST00000476289 OR52B2Q96RD2 323 aa28.76■■■□□ 2.19
CHKB-207ENST00000476289 ZBTB18Q99592 522 aa28.76■■■□□ 2.19
CHKB-207ENST00000476289 FOXC2Q99958 501 aa28.76■■■□□ 2.19
CHKB-207ENST00000476289 QRSL1Q9H0R6 528 aaKnown RBP28.76■■■□□ 2.19
CHKB-207ENST00000476289 CXXC4Q9H2H0 198 aa28.76■■■□□ 2.19
CHKB-207ENST00000476289 C6orf203Q9P0P8 240 aaPredicted RBP28.76■■■□□ 2.19
CHKB-207ENST00000476289 GJE1A6NN92 205 aa28.75■■■□□ 2.19
CHKB-207ENST00000476289 C16orf97H3BN30 126 aa28.75■■■□□ 2.19
CHKB-207ENST00000476289 KLF11O14901 512 aa28.75■■■□□ 2.19
CHKB-207ENST00000476289 IDO1P14902 403 aa28.75■■■□□ 2.19
CHKB-207ENST00000476289 AGTR1P30556 359 aa28.75■■■□□ 2.19
CHKB-207ENST00000476289 PDCD4Q53EL6 469 aaKnown RBP28.75■■■□□ 2.19
CHKB-207ENST00000476289 AGBL2Q5U5Z8 902 aa28.75■■■□□ 2.19
CHKB-207ENST00000476289 PIWIL2Q8TC59 973 aaKnown RBP28.75■■■□□ 2.19
CHKB-207ENST00000476289 CPNE4Q96A23 557 aaPredicted RBP28.75■■■□□ 2.19
CHKB-207ENST00000476289 MED18Q9BUE0 208 aa28.75■■■□□ 2.19
CHKB-207ENST00000476289 GLRX2Q9NS18 164 aa28.75■■■□□ 2.19
CHKB-207ENST00000476289 UQCRHLA0A096LP55 91 aa28.74■■■□□ 2.19
CHKB-207ENST00000476289 H6PDO95479 791 aa28.74■■■□□ 2.19
CHKB-207ENST00000476289 DNASE1P24855 282 aa28.74■■■□□ 2.19
CHKB-207ENST00000476289 PGM1P36871 562 aa28.74■■■□□ 2.19
CHKB-207ENST00000476289 PLAURQ03405 335 aa28.74■■■□□ 2.19
CHKB-207ENST00000476289 CHRNEQ04844 493 aa28.74■■■□□ 2.19
CHKB-207ENST00000476289 TIGD2Q4W5G0 525 aa28.74■■■□□ 2.19
CHKB-207ENST00000476289 GPAT3Q53EU6 434 aa28.74■■■□□ 2.19
CHKB-207ENST00000476289 ZNF621Q6ZSS3 439 aa28.74■■■□□ 2.19
CHKB-207ENST00000476289 C22orf34Q6ZV56 151 aa28.74■■■□□ 2.19
CHKB-207ENST00000476289 TRIML2Q8N7C3 387 aa28.74■■■□□ 2.19
CHKB-207ENST00000476289 ANKFN1Q8N957 763 aa28.74■■■□□ 2.19
CHKB-207ENST00000476289 GLB1L3Q8NCI6 653 aaPredicted RBP28.74■■■□□ 2.19
CHKB-207ENST00000476289 PNPT1Q8TCS8 783 aaKnown RBP28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms