RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 CSDC2Q9Y534 153 aaKnown RBP3.23□□□□□ -1.89
UBR3-208ENST00000474426 ACTL7BQ9Y614 415 aa3.23□□□□□ -1.89
UBR3-208ENST00000474426 KDM5AP29375 1690 aaKnown RBP3.22□□□□□ -1.89
UBR3-208ENST00000474426 PTPRFP10586 1907 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.22□□□□□ -1.89
UBR3-208ENST00000474426 ANTXRLA6NF34 631 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 CCDC182A6NF36 153 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 GLTPD2A6NH11 291 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 OR11H12B2RN74 326 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 ANKRD63C9JTQ0 380 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 ANHXE9PGG2 379 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 H0Y980 276 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 SCDO00767 359 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 NRP2O60462 931 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 SNX3O60493 162 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 SNAP91O60641 907 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 FKBP6O75344 327 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 VAPBO95292 243 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 CBX6O95503 412 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 NUDT17P0C025 328 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 PPIAL4GP0DN37 164 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 AZGP1P25311 298 aaKnown RBP3.22□□□□□ -1.89
UBR3-208ENST00000474426 GRNP28799 593 aaKnown RBP3.22□□□□□ -1.89
UBR3-208ENST00000474426 SSTR5P35346 364 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 ZNF157P51786 506 aaPredicted RBP3.22□□□□□ -1.89
UBR3-208ENST00000474426 UCNP55089 124 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 WNT3P56703 355 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 CDC42P60953 191 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 UFM1P61960 85 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 JAG1P78504 1218 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 ID2Q02363 134 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 SLC18A2Q05940 514 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 ZNF616Q08AN1 781 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 GPR17Q13304 367 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 TUSC3Q13454 348 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 PRTGQ2VWP7 1150 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 C4orf48Q5BLP8 95 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 GCSAMLQ5JQS6 135 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 CLLU1Q5K131 121 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 ZNF774Q6NX45 483 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 MRPL14Q6P1L8 145 aaKnown RBP3.22□□□□□ -1.89
UBR3-208ENST00000474426 LCLAT1Q6UWP7 414 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 OTOP2Q7RTS6 562 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 TCF24Q7RTU0 167 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 PTOV1Q86YD1 416 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 TMEM25Q86YD3 366 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 TMEM139Q8IV31 216 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 LYSMD2Q8IV50 215 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 ZBTB8OSQ8IWT0 167 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 ZNF595Q8IYB9 648 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 ZNF295-AS1Q8N0V1 137 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 Q8N402 240 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 C4orf32Q8N8J7 132 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 SIDT2Q8NBJ9 832 aaKnown RBP3.22□□□□□ -1.89
UBR3-208ENST00000474426 NECAP1Q8NC96 275 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 BVESQ8NE79 360 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 OR11H1Q8NG94 326 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 OR10G3Q8NGC4 313 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 OR11H2Q8NH07 326 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 ASB17Q8WXJ9 295 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 CTHRC1Q96CG8 243 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 WDR34Q96EX3 536 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 TEPSINQ96N21 525 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 OR8B4Q96RC9 309 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 SLC46A2Q9BY10 475 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 ULBP2Q9BZM5 246 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 ARV1Q9H2C2 271 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 TMPRSS5Q9H3S3 457 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 UBE2ZQ9H832 354 aaPredicted RBP3.22□□□□□ -1.89
UBR3-208ENST00000474426 SLC17A6Q9P2U8 582 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 CNOT8Q9UFF9 292 aaKnown RBP3.22□□□□□ -1.89
UBR3-208ENST00000474426 CBLCQ9ULV8 474 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 NOS1P29475 1434 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 ECM29Q5VYK3 1845 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 CFTRP13569 1480 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 ATRNL1Q5VV63 1379 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 MAP2P11137 1827 aaKnown RBP3.22□□□□□ -1.89
UBR3-208ENST00000474426 LOC105371242A0A075B767 164 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.22□□□□□ -1.89
UBR3-208ENST00000474426 A0A1B0GVI7 797 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 AGAP5A6NIR3 686 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 GFRA2O00451 464 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 COPEO14579 308 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 CTDSPLO15194 276 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 UBDO15205 165 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 MAGEB4O15481 346 aaPredicted RBP3.22□□□□□ -1.89
UBR3-208ENST00000474426 LATO43561 262 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 XPNPEP2O43895 674 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 TNFAIP8O95379 198 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 MED26O95402 600 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 GPR75O95800 540 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 BCL10O95999 233 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 EGFP01133 1207 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 TGFB1P01137 390 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 IL7P13232 177 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 RFX3P48380 749 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 PSMA6P60900 246 aaKnown RBP3.22□□□□□ -1.89
UBR3-208ENST00000474426 HSD11B2P80365 405 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 TPBGQ13641 420 aa3.22□□□□□ -1.89
UBR3-208ENST00000474426 ZNF846Q147U1 533 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms