RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 ABCA12Q86UK0 2595 aa18.37■□□□□ 0.53
SNX13-206ENST00000474067 KIAA1549Q9HCM3 1950 aa18.37■□□□□ 0.53
SNX13-206ENST00000474067 ADGRG4Q8IZF6 3080 aa18.37■□□□□ 0.53
SNX13-206ENST00000474067 MED12LQ86YW9 2145 aa18.37■□□□□ 0.53
SNX13-206ENST00000474067 MED12Q93074 2177 aa18.37■□□□□ 0.53
SNX13-206ENST00000474067 NPIPA5A0A0B4J1W7 369 aa18.37■□□□□ 0.53
SNX13-206ENST00000474067 SHISA8B8ZZ34 492 aa18.37■□□□□ 0.53
SNX13-206ENST00000474067 NPIPA7E9PJI5 369 aa18.37■□□□□ 0.53
SNX13-206ENST00000474067 H0YC42 278 aa18.37■□□□□ 0.53
SNX13-206ENST00000474067 C16orf97H3BN30 126 aa18.37■□□□□ 0.53
SNX13-206ENST00000474067 POLR3GO15318 223 aaPredicted RBP18.37■□□□□ 0.53
SNX13-206ENST00000474067 CXCL13O43927 109 aa18.37■□□□□ 0.53
SNX13-206ENST00000474067 DIAPH2O60879 1101 aa18.37■□□□□ 0.53
SNX13-206ENST00000474067 SS18L1O75177 396 aaPredicted RBP18.37■□□□□ 0.53
SNX13-206ENST00000474067 UGT2B17O75795 530 aa18.37■□□□□ 0.53
SNX13-206ENST00000474067 CYP7B1O75881 506 aa18.37■□□□□ 0.53
SNX13-206ENST00000474067 NPIPA8P0DM63 369 aa18.37■□□□□ 0.53
SNX13-206ENST00000474067 TPD52P55327 224 aaPredicted RBP18.37■□□□□ 0.53
SNX13-206ENST00000474067 NME5P56597 212 aa18.37■□□□□ 0.53
SNX13-206ENST00000474067 QPRTQ15274 297 aa18.37■□□□□ 0.53
SNX13-206ENST00000474067 TMEM201Q5SNT2 666 aa18.37■□□□□ 0.53
SNX13-206ENST00000474067 VWA1Q6PCB0 445 aa18.37■□□□□ 0.53
SNX13-206ENST00000474067 CBLN3Q6UW01 205 aa18.37■□□□□ 0.53
SNX13-206ENST00000474067 BTLAQ7Z6A9 289 aa18.37■□□□□ 0.53
SNX13-206ENST00000474067 MIER2Q8N344 545 aa18.37■□□□□ 0.53
SNX13-206ENST00000474067 ZFP90Q8TF47 636 aa18.37■□□□□ 0.53
SNX13-206ENST00000474067 ZBTB9Q96C00 473 aa18.37■□□□□ 0.53
SNX13-206ENST00000474067 ITCHQ96J02 903 aa18.37■□□□□ 0.53
SNX13-206ENST00000474067 RAD21L1Q9H4I0 556 aa18.37■□□□□ 0.53
SNX13-206ENST00000474067 EXOSC3Q9NQT5 275 aaKnown RBP18.37■□□□□ 0.53
SNX13-206ENST00000474067 SDR39U1Q9NRG7 319 aaPredicted RBP18.37■□□□□ 0.53
SNX13-206ENST00000474067 NUP214P35658 2090 aaPredicted RBP18.37■□□□□ 0.53
SNX13-206ENST00000474067 HMGB1P1B2RPK0 211 aaPredicted RBP18.36■□□□□ 0.53
SNX13-206ENST00000474067 ETV2O00321 342 aaPredicted RBP18.36■□□□□ 0.53
SNX13-206ENST00000474067 ZCCHC18P0CG32 403 aa18.36■□□□□ 0.53
SNX13-206ENST00000474067 DNAJA1P31689 397 aaKnown RBP18.36■□□□□ 0.53
SNX13-206ENST00000474067 SFTPDP35247 375 aa18.36■□□□□ 0.53
SNX13-206ENST00000474067 PHC1P78364 1004 aa18.36■□□□□ 0.53
SNX13-206ENST00000474067 SNTB1Q13884 538 aaKnown RBP18.36■□□□□ 0.53
SNX13-206ENST00000474067 ZSWIM7Q19AV6 140 aa18.36■□□□□ 0.53
SNX13-206ENST00000474067 CTU2Q2VPK5 515 aaKnown RBP18.36■□□□□ 0.53
SNX13-206ENST00000474067 ZNF563Q8TA94 476 aa18.36■□□□□ 0.53
SNX13-206ENST00000474067 LINC01560Q8TB33 94 aa18.36■□□□□ 0.53
SNX13-206ENST00000474067 POC1BQ8TC44 478 aa18.36■□□□□ 0.53
SNX13-206ENST00000474067 MED18Q9BUE0 208 aa18.36■□□□□ 0.53
SNX13-206ENST00000474067 SERHL2Q9H4I8 314 aa18.36■□□□□ 0.53
SNX13-206ENST00000474067 ARMC7Q9H6L4 198 aa18.36■□□□□ 0.53
SNX13-206ENST00000474067 TMEM185BQ9H7F4 350 aa18.36■□□□□ 0.53
SNX13-206ENST00000474067 VIPAS39Q9H9C1 493 aa18.36■□□□□ 0.53
SNX13-206ENST00000474067 PLSCR4Q9NRQ2 329 aa18.36■□□□□ 0.53
SNX13-206ENST00000474067 USH1CQ9Y6N9 552 aa18.36■□□□□ 0.53
SNX13-206ENST00000474067 A0A0J9YW62 118 aa18.35■□□□□ 0.53
SNX13-206ENST00000474067 FCMRO60667 390 aa18.35■□□□□ 0.53
SNX13-206ENST00000474067 AQP8O94778 261 aa18.35■□□□□ 0.53
SNX13-206ENST00000474067 UBTFL6P0CB48 400 aaPredicted RBP18.35■□□□□ 0.53
SNX13-206ENST00000474067 APOBEC1P41238 236 aaKnown RBP18.35■□□□□ 0.53
SNX13-206ENST00000474067 HTR3AP46098 478 aa18.35■□□□□ 0.53
SNX13-206ENST00000474067 RAC3P60763 192 aa18.35■□□□□ 0.53
SNX13-206ENST00000474067 CSNK2A1P68400 391 aaPredicted RBP18.35■□□□□ 0.53
SNX13-206ENST00000474067 SKP2Q13309 424 aa18.35■□□□□ 0.53
SNX13-206ENST00000474067 GUSBP1Q15486 140 aa18.35■□□□□ 0.53
SNX13-206ENST00000474067 ZNF239Q16600 458 aaKnown RBP18.35■□□□□ 0.53
SNX13-206ENST00000474067 TYW3Q6IPR3 259 aaKnown RBP18.35■□□□□ 0.53
SNX13-206ENST00000474067 PLXDC2Q6UX71 529 aa18.35■□□□□ 0.53
SNX13-206ENST00000474067 SPNS3Q6ZMD2 512 aa18.35■□□□□ 0.53
SNX13-206ENST00000474067 LRRC74BQ6ZQY2 392 aa18.35■□□□□ 0.53
SNX13-206ENST00000474067 RNF130Q86XS8 419 aa18.35■□□□□ 0.53
SNX13-206ENST00000474067 CDC20BQ86Y33 519 aa18.35■□□□□ 0.53
SNX13-206ENST00000474067 CLEC4FQ8N1N0 589 aa18.35■□□□□ 0.53
SNX13-206ENST00000474067 ARFGAP2Q8N6H7 521 aa18.35■□□□□ 0.53
SNX13-206ENST00000474067 ZHX1-C8orf76Q96EF9 292 aa18.35■□□□□ 0.53
SNX13-206ENST00000474067 USB1Q9BQ65 265 aaKnown RBP18.35■□□□□ 0.53
SNX13-206ENST00000474067 THUMPD3Q9BV44 507 aaKnown RBP18.35■□□□□ 0.53
SNX13-206ENST00000474067 OR10A4Q9H209 315 aa18.35■□□□□ 0.53
SNX13-206ENST00000474067 MTHFD2LQ9H903 347 aaPredicted RBP18.35■□□□□ 0.53
SNX13-206ENST00000474067 KLHL9Q9P2J3 617 aa18.35■□□□□ 0.53
SNX13-206ENST00000474067 P2RX2Q9UBL9 471 aa18.35■□□□□ 0.53
SNX13-206ENST00000474067 ST6GALNAC2Q9UJ37 374 aa18.35■□□□□ 0.53
SNX13-206ENST00000474067 ANKHD1Q8IWZ3 2542 aaKnown RBP18.34■□□□□ 0.53
SNX13-206ENST00000474067 DNAJA2O60884 412 aa18.34■□□□□ 0.53
SNX13-206ENST00000474067 PRKD3O94806 890 aa18.34■□□□□ 0.53
SNX13-206ENST00000474067 CGAP01215 116 aa18.34■□□□□ 0.53
SNX13-206ENST00000474067 NR2F1P10589 423 aa18.34■□□□□ 0.53
SNX13-206ENST00000474067 UGT2B10P36537 528 aa18.34■□□□□ 0.53
SNX13-206ENST00000474067 POLR2JP52435 117 aaKnown RBP18.34■□□□□ 0.53
SNX13-206ENST00000474067 MAP2K6P52564 334 aa18.34■□□□□ 0.53
SNX13-206ENST00000474067 KCNJ10P78508 379 aa18.34■□□□□ 0.53
SNX13-206ENST00000474067 TMEM176BQ3YBM2 270 aaPredicted RBP18.34■□□□□ 0.53
SNX13-206ENST00000474067 PEX5LQ8IYB4 626 aa18.34■□□□□ 0.53
SNX13-206ENST00000474067 ZNF440Q8IYI8 595 aa18.34■□□□□ 0.53
SNX13-206ENST00000474067 RNF128Q8TEB7 428 aa18.34■□□□□ 0.53
SNX13-206ENST00000474067 RAB8BQ92930 207 aa18.34■□□□□ 0.53
SNX13-206ENST00000474067 TEX37Q96LM6 180 aa18.34■□□□□ 0.53
SNX13-206ENST00000474067 OPN3Q9H1Y3 402 aaPredicted RBP18.34■□□□□ 0.53
SNX13-206ENST00000474067 TCF7L2Q9NQB0 619 aa18.34■□□□□ 0.53
SNX13-206ENST00000474067 TMEM45AQ9NWC5 275 aa18.34■□□□□ 0.53
SNX13-206ENST00000474067 TESMINQ9Y4I5 508 aa18.34■□□□□ 0.53
SNX13-206ENST00000474067 FAM234BA2RU67 622 aa18.33■□□□□ 0.52
SNX13-206ENST00000474067 HMGN4O00479 90 aa18.33■□□□□ 0.52
SNX13-206ENST00000474067 H6PDO95479 791 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms