RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 SPRR3Q9UBC9 169 aa8.25□□□□□ -1.09
SMC4-214ENST00000472991 SUCOQ9UBS9 1254 aaKnown RBP8.25□□□□□ -1.09
SMC4-214ENST00000472991 USP22Q9UPT9 525 aa8.25□□□□□ -1.09
SMC4-214ENST00000472991 ANGPT4Q9Y264 503 aa8.25□□□□□ -1.09
SMC4-214ENST00000472991 CARD8Q9Y2G2 431 aa8.25□□□□□ -1.09
SMC4-214ENST00000472991 NCOA6Q14686 2063 aaPredicted RBP8.25□□□□□ -1.09
SMC4-214ENST00000472991 INTS1Q8N201 2190 aaKnown RBP8.24□□□□□ -1.09
SMC4-214ENST00000472991 TRGV5A0A0B4J1U4 118 aa8.24□□□□□ -1.09
SMC4-214ENST00000472991 A0A1B0GTH9 108 aa8.24□□□□□ -1.09
SMC4-214ENST00000472991 A6NHS1 94 aa8.24□□□□□ -1.09
SMC4-214ENST00000472991 FAM220BPB1ANY3 271 aa8.24□□□□□ -1.09
SMC4-214ENST00000472991 NME4O00746 187 aa8.24□□□□□ -1.09
SMC4-214ENST00000472991 EIF4E2O60573 245 aaKnown RBP8.24□□□□□ -1.09
SMC4-214ENST00000472991 BCAS1O75363 584 aaPredicted RBP8.24□□□□□ -1.09
SMC4-214ENST00000472991 NUDT14O95848 222 aa8.24□□□□□ -1.09
SMC4-214ENST00000472991 DBIP07108 87 aaKnown RBP8.24□□□□□ -1.09
SMC4-214ENST00000472991 UBTFL6P0CB48 400 aaPredicted RBP8.24□□□□□ -1.09
SMC4-214ENST00000472991 ESRRAP11474 423 aaPredicted RBP8.24□□□□□ -1.09
SMC4-214ENST00000472991 HK1P19367 917 aa8.24□□□□□ -1.09
SMC4-214ENST00000472991 ENDOUP21128 410 aaKnown RBP8.24□□□□□ -1.09
SMC4-214ENST00000472991 GNLYP22749 145 aa8.24□□□□□ -1.09
SMC4-214ENST00000472991 PCGF2P35227 344 aa8.24□□□□□ -1.09
SMC4-214ENST00000472991 PGM1P36871 562 aa8.24□□□□□ -1.09
SMC4-214ENST00000472991 EIF1AXP47813 144 aaKnown RBP8.24□□□□□ -1.09
SMC4-214ENST00000472991 P2RX1P51575 399 aa8.24□□□□□ -1.09
SMC4-214ENST00000472991 DSCR4P56555 118 aaPredicted RBP8.24□□□□□ -1.09
SMC4-214ENST00000472991 PSME3P61289 254 aa8.24□□□□□ -1.09
SMC4-214ENST00000472991 MXRA7P84157 204 aa8.24□□□□□ -1.09
SMC4-214ENST00000472991 RBBP4Q09028 425 aa8.24□□□□□ -1.09
SMC4-214ENST00000472991 SKP2Q13309 424 aa8.24□□□□□ -1.09
SMC4-214ENST00000472991 GANABQ14697 944 aaKnown RBP8.24□□□□□ -1.09
SMC4-214ENST00000472991 KRT72Q14CN4 511 aa8.24□□□□□ -1.09
SMC4-214ENST00000472991 LIN52Q52LA3 116 aa8.24□□□□□ -1.09
SMC4-214ENST00000472991 MRPL2Q5T653 305 aaKnown RBP8.24□□□□□ -1.09
SMC4-214ENST00000472991 ARHGAP11AQ6P4F7 1023 aa8.24□□□□□ -1.09
SMC4-214ENST00000472991 ARSKQ6UWY0 536 aa8.24□□□□□ -1.09
SMC4-214ENST00000472991 EIF3MQ7L2H7 374 aaKnown RBP8.24□□□□□ -1.09
SMC4-214ENST00000472991 TRPM8Q7Z2W7 1104 aa8.24□□□□□ -1.09
SMC4-214ENST00000472991 FGD2Q7Z6J4 655 aa8.24□□□□□ -1.09
SMC4-214ENST00000472991 IFNEQ86WN2 208 aa8.24□□□□□ -1.09
SMC4-214ENST00000472991 CALHM3Q86XJ0 350 aa8.24□□□□□ -1.09
SMC4-214ENST00000472991 CHERPQ8IWX8 916 aaKnown RBP8.24□□□□□ -1.09
SMC4-214ENST00000472991 SLC15A3Q8IY34 581 aa8.24□□□□□ -1.09
SMC4-214ENST00000472991 METTL25Q8N6Q8 603 aa8.24□□□□□ -1.09
SMC4-214ENST00000472991 FAM71CQ8NEG0 241 aa8.24□□□□□ -1.09
SMC4-214ENST00000472991 OR14L1PQ8NHC6 308 aa8.24□□□□□ -1.09
SMC4-214ENST00000472991 CNOT9Q92600 299 aaKnown RBP8.24□□□□□ -1.09
SMC4-214ENST00000472991 PMM1Q92871 262 aa8.24□□□□□ -1.09
SMC4-214ENST00000472991 C1GALT1C1Q96EU7 318 aa8.24□□□□□ -1.09
SMC4-214ENST00000472991 DTNBP1Q96EV8 351 aa8.24□□□□□ -1.09
SMC4-214ENST00000472991 FAM46AQ96IP4 442 aaKnown RBP8.24□□□□□ -1.09
SMC4-214ENST00000472991 HOPXQ9BPY8 73 aaPredicted RBP8.24□□□□□ -1.09
SMC4-214ENST00000472991 SPATA9Q9BWV2 254 aa8.24□□□□□ -1.09
SMC4-214ENST00000472991 PTGES2Q9H7Z7 377 aa8.24□□□□□ -1.09
SMC4-214ENST00000472991 CACYBPQ9HB71 228 aaKnown RBP8.24□□□□□ -1.09
SMC4-214ENST00000472991 HHATLQ9HCP6 504 aa8.24□□□□□ -1.09
SMC4-214ENST00000472991 ACKR4Q9NPB9 350 aa8.24□□□□□ -1.09
SMC4-214ENST00000472991 TNFRSF10DQ9UBN6 386 aa8.24□□□□□ -1.09
SMC4-214ENST00000472991 ICAM5Q9UMF0 924 aa8.24□□□□□ -1.09
SMC4-214ENST00000472991 VDAC3Q9Y277 283 aa8.24□□□□□ -1.09
SMC4-214ENST00000472991 ZNF443Q9Y2A4 671 aaPredicted RBP8.24□□□□□ -1.09
SMC4-214ENST00000472991 SLC35A3Q9Y2D2 325 aa8.24□□□□□ -1.09
SMC4-214ENST00000472991 RPH3AQ9Y2J0 694 aaPredicted RBP8.24□□□□□ -1.09
SMC4-214ENST00000472991 SLC6A5Q9Y345 797 aa8.24□□□□□ -1.09
SMC4-214ENST00000472991 MYO18BQ8IUG5 2567 aa8.24□□□□□ -1.09
SMC4-214ENST00000472991 KRTAP9-6A0A140TA67 174 aa8.23□□□□□ -1.09
SMC4-214ENST00000472991 A0A1B0GVC2 190 aa8.23□□□□□ -1.09
SMC4-214ENST00000472991 FAM47E-STBD1D6RA91 191 aa8.23□□□□□ -1.09
SMC4-214ENST00000472991 NPIPA2E9PIF3 369 aa8.23□□□□□ -1.09
SMC4-214ENST00000472991 NPIPA3F8WFD2 350 aa8.23□□□□□ -1.09
SMC4-214ENST00000472991 AQP7O14520 342 aa8.23□□□□□ -1.09
SMC4-214ENST00000472991 SUSD5O60279 629 aa8.23□□□□□ -1.09
SMC4-214ENST00000472991 ZIC3O60481 467 aa8.23□□□□□ -1.09
SMC4-214ENST00000472991 HCN1O60741 890 aa8.23□□□□□ -1.09
SMC4-214ENST00000472991 OPN1SWP03999 348 aa8.23□□□□□ -1.09
SMC4-214ENST00000472991 PABPC4LP0CB38 370 aaKnown RBP8.23□□□□□ -1.09
SMC4-214ENST00000472991 ETS2P15036 469 aa8.23□□□□□ -1.09
SMC4-214ENST00000472991 ABOP16442 354 aa8.23□□□□□ -1.09
SMC4-214ENST00000472991 PTGS2P35354 604 aa8.23□□□□□ -1.09
SMC4-214ENST00000472991 ZNF41P51814 821 aaPredicted RBP8.23□□□□□ -1.09
SMC4-214ENST00000472991 PCBP3P57721 371 aaKnown RBP8.23□□□□□ -1.09
SMC4-214ENST00000472991 KCNJ10P78508 379 aa8.23□□□□□ -1.09
SMC4-214ENST00000472991 SLC25A3Q00325 362 aa8.23□□□□□ -1.09
SMC4-214ENST00000472991 LIPEQ05469 1076 aa8.23□□□□□ -1.09
SMC4-214ENST00000472991 RBPJQ06330 500 aa8.23□□□□□ -1.09
SMC4-214ENST00000472991 LARS2Q15031 903 aaKnown RBP8.23□□□□□ -1.09
SMC4-214ENST00000472991 VMACQ2NL98 169 aa8.23□□□□□ -1.09
SMC4-214ENST00000472991 PLPPR5Q32ZL2 321 aa8.23□□□□□ -1.09
SMC4-214ENST00000472991 ZNF311Q5JNZ3 666 aa8.23□□□□□ -1.09
SMC4-214ENST00000472991 RAET1LQ5VY80 246 aa8.23□□□□□ -1.09
SMC4-214ENST00000472991 ERICH5Q6P6B1 374 aa8.23□□□□□ -1.09
SMC4-214ENST00000472991 KRT73Q86Y46 540 aa8.23□□□□□ -1.09
SMC4-214ENST00000472991 SLC30A8Q8IWU4 369 aa8.23□□□□□ -1.09
SMC4-214ENST00000472991 CMIPQ8IY22 773 aa8.23□□□□□ -1.09
SMC4-214ENST00000472991 MICU2Q8IYU8 434 aa8.23□□□□□ -1.09
SMC4-214ENST00000472991 PGAM4Q8N0Y7 254 aa8.23□□□□□ -1.09
SMC4-214ENST00000472991 OR2T12Q8NG77 320 aa8.23□□□□□ -1.09
SMC4-214ENST00000472991 OR5M1Q8NGP8 315 aa8.23□□□□□ -1.09
SMC4-214ENST00000472991 NEIL3Q8TAT5 605 aa8.23□□□□□ -1.09
SMC4-214ENST00000472991 UBASH3BQ8TF42 649 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms