RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 PSMB1P20618 241 aaKnown RBP13.63□□□□□ -0.23
VTI1A-203ENST00000472892 RPL14P50914 215 aaKnown RBP13.63□□□□□ -0.23
VTI1A-203ENST00000472892 PDCD2Q16342 344 aaPredicted RBP13.63□□□□□ -0.23
VTI1A-203ENST00000472892 ARHGAP11BQ3KRB8 267 aa13.63□□□□□ -0.23
VTI1A-203ENST00000472892 TNFAIP8L3Q5GJ75 292 aa13.63□□□□□ -0.23
VTI1A-203ENST00000472892 BEX5Q5H9J7 111 aa13.63□□□□□ -0.23
VTI1A-203ENST00000472892 BIVMQ86UB2 503 aa13.63□□□□□ -0.23
VTI1A-203ENST00000472892 CLEC4FQ8N1N0 589 aa13.63□□□□□ -0.23
VTI1A-203ENST00000472892 TOR1AIP2Q8NFQ8 470 aa13.63□□□□□ -0.23
VTI1A-203ENST00000472892 MIPOL1Q8TD10 442 aa13.63□□□□□ -0.23
VTI1A-203ENST00000472892 ABHD3Q8WU67 409 aa13.63□□□□□ -0.23
VTI1A-203ENST00000472892 SORT1Q99523 831 aa13.63□□□□□ -0.23
VTI1A-203ENST00000472892 PARD6BQ9BYG5 372 aa13.63□□□□□ -0.23
VTI1A-203ENST00000472892 C12orf49Q9H741 205 aa13.63□□□□□ -0.23
VTI1A-203ENST00000472892 COQ10BQ9H8M1 238 aa13.63□□□□□ -0.23
VTI1A-203ENST00000472892 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.63□□□□□ -0.23
VTI1A-203ENST00000472892 HAO1Q9UJM8 370 aa13.63□□□□□ -0.23
VTI1A-203ENST00000472892 V9GYY5 206 aaPredicted RBP13.63□□□□□ -0.23
VTI1A-203ENST00000472892 PRSS51A0A1B0GVH4 220 aa13.62□□□□□ -0.23
VTI1A-203ENST00000472892 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.62□□□□□ -0.23
VTI1A-203ENST00000472892 ANKRD28O15084 1053 aa13.62□□□□□ -0.23
VTI1A-203ENST00000472892 STX11O75558 287 aa13.62□□□□□ -0.23
VTI1A-203ENST00000472892 GCM2O75603 506 aaPredicted RBP13.62□□□□□ -0.23
VTI1A-203ENST00000472892 INHBBP09529 407 aa13.62□□□□□ -0.23
VTI1A-203ENST00000472892 UBL4AP11441 157 aa13.62□□□□□ -0.23
VTI1A-203ENST00000472892 SOAT1P35610 550 aa13.62□□□□□ -0.23
VTI1A-203ENST00000472892 SLC1A6P48664 564 aa13.62□□□□□ -0.23
VTI1A-203ENST00000472892 RAC3P60763 192 aa13.62□□□□□ -0.23
VTI1A-203ENST00000472892 PHC1P78364 1004 aa13.62□□□□□ -0.23
VTI1A-203ENST00000472892 SKP2Q13309 424 aa13.62□□□□□ -0.23
VTI1A-203ENST00000472892 CBFBQ13951 182 aa13.62□□□□□ -0.23
VTI1A-203ENST00000472892 MPP2Q14168 576 aa13.62□□□□□ -0.23
VTI1A-203ENST00000472892 QPRTQ15274 297 aa13.62□□□□□ -0.23
VTI1A-203ENST00000472892 GPR68Q15743 365 aa13.62□□□□□ -0.23
VTI1A-203ENST00000472892 TMEM201Q5SNT2 666 aa13.62□□□□□ -0.23
VTI1A-203ENST00000472892 PDZK1Q5T2W1 519 aa13.62□□□□□ -0.23
VTI1A-203ENST00000472892 HEPHL1Q6MZM0 1159 aa13.62□□□□□ -0.23
VTI1A-203ENST00000472892 PRSS57Q6UWY2 283 aa13.62□□□□□ -0.23
VTI1A-203ENST00000472892 FCRLAQ7L513 359 aa13.62□□□□□ -0.23
VTI1A-203ENST00000472892 NUFIP2Q7Z417 695 aaKnown RBP13.62□□□□□ -0.23
VTI1A-203ENST00000472892 P3H2Q8IVL5 708 aa13.62□□□□□ -0.23
VTI1A-203ENST00000472892 TUSC5Q8IXB3 177 aa13.62□□□□□ -0.23
VTI1A-203ENST00000472892 LRRC34Q8IZ02 419 aa13.62□□□□□ -0.23
VTI1A-203ENST00000472892 GABRG1Q8N1C3 465 aa13.62□□□□□ -0.23
VTI1A-203ENST00000472892 ZNF614Q8N883 585 aa13.62□□□□□ -0.23
VTI1A-203ENST00000472892 RFWD2Q8NHY2 731 aa13.62□□□□□ -0.23
VTI1A-203ENST00000472892 ZFP90Q8TF47 636 aa13.62□□□□□ -0.23
VTI1A-203ENST00000472892 PPP1R36Q96LQ0 422 aa13.62□□□□□ -0.23
VTI1A-203ENST00000472892 CCL19Q99731 98 aa13.62□□□□□ -0.23
VTI1A-203ENST00000472892 HDHD5Q9BXW7 423 aa13.62□□□□□ -0.23
VTI1A-203ENST00000472892 DPY30Q9C005 99 aa13.62□□□□□ -0.23
VTI1A-203ENST00000472892 ACTR6Q9GZN1 396 aa13.62□□□□□ -0.23
VTI1A-203ENST00000472892 LAT2Q9GZY6 243 aa13.62□□□□□ -0.23
VTI1A-203ENST00000472892 KLHL13Q9P2N7 655 aa13.62□□□□□ -0.23
VTI1A-203ENST00000472892 PCDHGB4Q9UN71 923 aa13.62□□□□□ -0.23
VTI1A-203ENST00000472892 RNF103-CHMP3A0A140T963 221 aa13.61□□□□□ -0.23
VTI1A-203ENST00000472892 UGT2B17O75795 530 aa13.61□□□□□ -0.23
VTI1A-203ENST00000472892 YES1P07947 543 aa13.61□□□□□ -0.23
VTI1A-203ENST00000472892 ENPP1P22413 925 aa13.61□□□□□ -0.23
VTI1A-203ENST00000472892 UQCRC2P22695 453 aa13.61□□□□□ -0.23
VTI1A-203ENST00000472892 NR1H2P55055 460 aa13.61□□□□□ -0.23
VTI1A-203ENST00000472892 SELENBP1Q13228 472 aa13.61□□□□□ -0.23
VTI1A-203ENST00000472892 Q5PR19 223 aa13.61□□□□□ -0.23
VTI1A-203ENST00000472892 ANXA8L1Q5VT79 327 aa13.61□□□□□ -0.23
VTI1A-203ENST00000472892 TFAP2EQ6VUC0 442 aa13.61□□□□□ -0.23
VTI1A-203ENST00000472892 KIRREL3Q8IZU9 778 aa13.61□□□□□ -0.23
VTI1A-203ENST00000472892 SLC43A2Q8N370 569 aa13.61□□□□□ -0.23
VTI1A-203ENST00000472892 ATP6V1C2Q8NEY4 427 aa13.61□□□□□ -0.23
VTI1A-203ENST00000472892 STEAP2Q8NFT2 490 aa13.61□□□□□ -0.23
VTI1A-203ENST00000472892 OR4A15Q8NGL6 344 aa13.61□□□□□ -0.23
VTI1A-203ENST00000472892 OIT3Q8WWZ8 545 aa13.61□□□□□ -0.23
VTI1A-203ENST00000472892 IGFBPL1Q8WX77 278 aa13.61□□□□□ -0.23
VTI1A-203ENST00000472892 TESCQ96BS2 214 aa13.61□□□□□ -0.23
VTI1A-203ENST00000472892 SLC35G5Q96KT7 338 aa13.61□□□□□ -0.23
VTI1A-203ENST00000472892 SMR3AQ99954 134 aa13.61□□□□□ -0.23
VTI1A-203ENST00000472892 TMEM204Q9BSN7 226 aa13.61□□□□□ -0.23
VTI1A-203ENST00000472892 THUMPD3Q9BV44 507 aaKnown RBP13.61□□□□□ -0.23
VTI1A-203ENST00000472892 ZNF350Q9GZX5 532 aa13.61□□□□□ -0.23
VTI1A-203ENST00000472892 OR51I1Q9H343 314 aa13.61□□□□□ -0.23
VTI1A-203ENST00000472892 EXD2Q9NVH0 621 aa13.61□□□□□ -0.23
VTI1A-203ENST00000472892 ING1Q9UK53 422 aaPredicted RBP13.61□□□□□ -0.23
VTI1A-203ENST00000472892 RAB21Q9UL25 225 aa13.61□□□□□ -0.23
VTI1A-203ENST00000472892 MKLN1Q9UL63 735 aa13.61□□□□□ -0.23
VTI1A-203ENST00000472892 CENPVL1A0A0U1RR11 272 aa13.6□□□□□ -0.23
VTI1A-203ENST00000472892 AGR2O95994 175 aa13.6□□□□□ -0.23
VTI1A-203ENST00000472892 LBPP18428 481 aa13.6□□□□□ -0.23
VTI1A-203ENST00000472892 BGNP21810 368 aa13.6□□□□□ -0.23
VTI1A-203ENST00000472892 STX3Q13277 289 aa13.6□□□□□ -0.23
VTI1A-203ENST00000472892 CASP8Q14790 479 aa13.6□□□□□ -0.23
VTI1A-203ENST00000472892 TIGD2Q4W5G0 525 aa13.6□□□□□ -0.23
VTI1A-203ENST00000472892 ZNF704Q6ZNC4 412 aaPredicted RBP13.6□□□□□ -0.23
VTI1A-203ENST00000472892 PLEKHM3Q6ZWE6 761 aa13.6□□□□□ -0.23
VTI1A-203ENST00000472892 EIF3MQ7L2H7 374 aaKnown RBP13.6□□□□□ -0.23
VTI1A-203ENST00000472892 OLIG3Q7RTU3 272 aa13.6□□□□□ -0.23
VTI1A-203ENST00000472892 TMCO5AQ8N6Q1 288 aa13.6□□□□□ -0.23
VTI1A-203ENST00000472892 VPS37AQ8NEZ2 397 aa13.6□□□□□ -0.23
VTI1A-203ENST00000472892 ST8SIA1Q92185 356 aa13.6□□□□□ -0.23
VTI1A-203ENST00000472892 ARL8AQ96BM9 186 aa13.6□□□□□ -0.23
VTI1A-203ENST00000472892 PLPPR2Q96GM1 343 aa13.6□□□□□ -0.23
VTI1A-203ENST00000472892 TACO1Q9BSH4 297 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms