RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 UGT2B28Q9BY64 529 aa18.09■□□□□ 0.49
SF1-213ENST00000472725 SPRR3Q9UBC9 169 aa18.09■□□□□ 0.49
SF1-213ENST00000472725 ACAD8Q9UKU7 415 aa18.09■□□□□ 0.49
SF1-213ENST00000472725 VDAC3Q9Y277 283 aa18.09■□□□□ 0.49
SF1-213ENST00000472725 CHST2Q9Y4C5 530 aa18.09■□□□□ 0.49
SF1-213ENST00000472725 AP4B1Q9Y6B7 739 aa18.09■□□□□ 0.49
SF1-213ENST00000472725 POLEQ07864 2286 aa18.09■□□□□ 0.49
SF1-213ENST00000472725 ZNF462Q96JM2 2506 aa18.08■□□□□ 0.49
SF1-213ENST00000472725 OR2M5A3KFT3 312 aa18.08■□□□□ 0.48
SF1-213ENST00000472725 ATP5HO75947 161 aa18.08■□□□□ 0.48
SF1-213ENST00000472725 NTN1O95631 604 aa18.08■□□□□ 0.48
SF1-213ENST00000472725 GABRA1P14867 456 aa18.08■□□□□ 0.48
SF1-213ENST00000472725 PRKCAP17252 672 aa18.08■□□□□ 0.48
SF1-213ENST00000472725 GNLYP22749 145 aa18.08■□□□□ 0.48
SF1-213ENST00000472725 PSMA4P25789 261 aaKnown RBP18.08■□□□□ 0.48
SF1-213ENST00000472725 FKBP2P26885 142 aaKnown RBP18.08■□□□□ 0.48
SF1-213ENST00000472725 KDELR2P33947 212 aa18.08■□□□□ 0.48
SF1-213ENST00000472725 PTGER4P35408 488 aa18.08■□□□□ 0.48
SF1-213ENST00000472725 HTR3AP46098 478 aa18.08■□□□□ 0.48
SF1-213ENST00000472725 KCNJ5P48544 419 aa18.08■□□□□ 0.48
SF1-213ENST00000472725 RNF144AP50876 292 aaPredicted RBP18.08■□□□□ 0.48
SF1-213ENST00000472725 DMTNQ08495 405 aa18.08■□□□□ 0.48
SF1-213ENST00000472725 EPS8Q12929 822 aa18.08■□□□□ 0.48
SF1-213ENST00000472725 MRPL49Q13405 166 aaKnown RBP18.08■□□□□ 0.48
SF1-213ENST00000472725 QPRTQ15274 297 aa18.08■□□□□ 0.48
SF1-213ENST00000472725 FXNQ16595 210 aa18.08■□□□□ 0.48
SF1-213ENST00000472725 CLIP4Q8N3C7 705 aa18.08■□□□□ 0.48
SF1-213ENST00000472725 FBXO27Q8NI29 283 aa18.08■□□□□ 0.48
SF1-213ENST00000472725 CDRT15Q96T59 188 aa18.08■□□□□ 0.48
SF1-213ENST00000472725 PRDM14Q9GZV8 571 aa18.08■□□□□ 0.48
SF1-213ENST00000472725 ACER3Q9NUN7 267 aa18.08■□□□□ 0.48
SF1-213ENST00000472725 RLIMQ9NVW2 624 aa18.08■□□□□ 0.48
SF1-213ENST00000472725 CD300AQ9UGN4 299 aa18.08■□□□□ 0.48
SF1-213ENST00000472725 BAG5Q9UL15 447 aa18.08■□□□□ 0.48
SF1-213ENST00000472725 PRPF19Q9UMS4 504 aaKnown RBP18.08■□□□□ 0.48
SF1-213ENST00000472725 RPH3AQ9Y2J0 694 aaPredicted RBP18.08■□□□□ 0.48
SF1-213ENST00000472725 SLC6A5Q9Y345 797 aa18.08■□□□□ 0.48
SF1-213ENST00000472725 A0A1B0GUH1 482 aa18.07■□□□□ 0.48
SF1-213ENST00000472725 FIGNL2A6NMB9 653 aa18.07■□□□□ 0.48
SF1-213ENST00000472725 AHRRA9YTQ3 701 aa18.07■□□□□ 0.48
SF1-213ENST00000472725 NPIPA2E9PIF3 369 aa18.07■□□□□ 0.48
SF1-213ENST00000472725 NPIPA3F8WFD2 350 aa18.07■□□□□ 0.48
SF1-213ENST00000472725 GSTA4O15217 222 aa18.07■□□□□ 0.48
SF1-213ENST00000472725 GMFGO60234 142 aa18.07■□□□□ 0.48
SF1-213ENST00000472725 WDR1O75083 606 aa18.07■□□□□ 0.48
SF1-213ENST00000472725 BCAS1O75363 584 aaPredicted RBP18.07■□□□□ 0.48
SF1-213ENST00000472725 GMNNO75496 209 aa18.07■□□□□ 0.48
SF1-213ENST00000472725 CA7P43166 264 aa18.07■□□□□ 0.48
SF1-213ENST00000472725 MAP2K6P52564 334 aa18.07■□□□□ 0.48
SF1-213ENST00000472725 GXYLT1Q4G148 440 aa18.07■□□□□ 0.48
SF1-213ENST00000472725 C6orf89Q6UWU4 347 aa18.07■□□□□ 0.48
SF1-213ENST00000472725 ZNF563Q8TA94 476 aa18.07■□□□□ 0.48
SF1-213ENST00000472725 TAMM41Q96BW9 452 aa18.07■□□□□ 0.48
SF1-213ENST00000472725 RNF145Q96MT1 663 aa18.07■□□□□ 0.48
SF1-213ENST00000472725 TP63Q9H3D4 680 aaPredicted RBP18.07■□□□□ 0.48
SF1-213ENST00000472725 TAS2R1Q9NYW7 299 aa18.07■□□□□ 0.48
SF1-213ENST00000472725 PRRC2CQ9Y520 2896 aaKnown RBP18.07■□□□□ 0.48
SF1-213ENST00000472725 CXCR6O00574 342 aa18.06■□□□□ 0.48
SF1-213ENST00000472725 WISP1O95388 367 aa18.06■□□□□ 0.48
SF1-213ENST00000472725 LGI1O95970 557 aa18.06■□□□□ 0.48
SF1-213ENST00000472725 TPOP07202 933 aa18.06■□□□□ 0.48
SF1-213ENST00000472725 GP1BBP13224 206 aa18.06■□□□□ 0.48
SF1-213ENST00000472725 APOBEC1P41238 236 aaKnown RBP18.06■□□□□ 0.48
SF1-213ENST00000472725 ACAA2P42765 397 aaKnown RBP18.06■□□□□ 0.48
SF1-213ENST00000472725 LHX2P50458 406 aa18.06■□□□□ 0.48
SF1-213ENST00000472725 RASSF2P50749 326 aa18.06■□□□□ 0.48
SF1-213ENST00000472725 SESN3P58005 492 aa18.06■□□□□ 0.48
SF1-213ENST00000472725 COPZ1P61923 177 aa18.06■□□□□ 0.48
SF1-213ENST00000472725 RAC1P63000 192 aa18.06■□□□□ 0.48
SF1-213ENST00000472725 BNIP1Q12981 228 aa18.06■□□□□ 0.48
SF1-213ENST00000472725 GRINAQ7Z429 371 aa18.06■□□□□ 0.48
SF1-213ENST00000472725 POC1BQ8TC44 478 aa18.06■□□□□ 0.48
SF1-213ENST00000472725 RELTQ969Z4 430 aa18.06■□□□□ 0.48
SF1-213ENST00000472725 SERINC1Q9NRX5 453 aa18.06■□□□□ 0.48
SF1-213ENST00000472725 USP22Q9UPT9 525 aa18.06■□□□□ 0.48
SF1-213ENST00000472725 OSGIN2Q9Y236 505 aa18.06■□□□□ 0.48
SF1-213ENST00000472725 RP1L1Q8IWN7 2480 aaPredicted RBP18.05■□□□□ 0.48
SF1-213ENST00000472725 GJE1A6NN92 205 aa18.05■□□□□ 0.48
SF1-213ENST00000472725 TPST1O60507 370 aa18.05■□□□□ 0.48
SF1-213ENST00000472725 ZNF708P17019 499 aa18.05■□□□□ 0.48
SF1-213ENST00000472725 GGT1P19440 569 aa18.05■□□□□ 0.48
SF1-213ENST00000472725 POU3F2P20265 443 aaPredicted RBP18.05■□□□□ 0.48
SF1-213ENST00000472725 CD247P20963 164 aa18.05■□□□□ 0.48
SF1-213ENST00000472725 ME2P23368 584 aa18.05■□□□□ 0.48
SF1-213ENST00000472725 RYKP34925 604 aa18.05■□□□□ 0.48
SF1-213ENST00000472725 SLC1A3P43003 542 aa18.05■□□□□ 0.48
SF1-213ENST00000472725 IDH2P48735 452 aaKnown RBP18.05■□□□□ 0.48
SF1-213ENST00000472725 FOXF1Q12946 379 aa18.05■□□□□ 0.48
SF1-213ENST00000472725 SELENBP1Q13228 472 aa18.05■□□□□ 0.48
SF1-213ENST00000472725 TOMM34Q15785 309 aaPredicted RBP18.05■□□□□ 0.48
SF1-213ENST00000472725 DUSP7Q16829 419 aa18.05■□□□□ 0.48
SF1-213ENST00000472725 DNAL1Q4LDG9 190 aa18.05■□□□□ 0.48
SF1-213ENST00000472725 WBP2NLQ6ICG8 309 aa18.05■□□□□ 0.48
SF1-213ENST00000472725 RINLQ6ZS11 566 aa18.05■□□□□ 0.48
SF1-213ENST00000472725 CD163Q86VB7 1156 aa18.05■□□□□ 0.48
SF1-213ENST00000472725 DOLPP1Q86YN1 238 aa18.05■□□□□ 0.48
SF1-213ENST00000472725 LSMEM1Q8N8F7 131 aa18.05■□□□□ 0.48
SF1-213ENST00000472725 ZPLD1Q8TCW7 415 aa18.05■□□□□ 0.48
SF1-213ENST00000472725 LZICQ8WZA0 190 aa18.05■□□□□ 0.48
SF1-213ENST00000472725 WDYHV1Q96HA8 205 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms