RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 SOCS3O14543 225 aa5.34□□□□□ -1.55
SMC5-202ENST00000471372 RGS16O15492 202 aaPredicted RBP5.34□□□□□ -1.55
SMC5-202ENST00000471372 ATP5LO75964 103 aa5.34□□□□□ -1.55
SMC5-202ENST00000471372 SERPINB2P05120 415 aa5.34□□□□□ -1.55
SMC5-202ENST00000471372 CRYGBP07316 175 aa5.34□□□□□ -1.55
SMC5-202ENST00000471372 PPIAL4FP0DN26 164 aa5.34□□□□□ -1.55
SMC5-202ENST00000471372 UGT1A4P22310 534 aa5.34□□□□□ -1.55
SMC5-202ENST00000471372 PTBP1P26599 531 aaKnown RBP eCLIP5.34□□□□□ -1.55
SMC5-202ENST00000471372 CD80P33681 288 aa5.34□□□□□ -1.55
SMC5-202ENST00000471372 SYKP43405 635 aa5.34□□□□□ -1.55
SMC5-202ENST00000471372 OGDHQ02218 1023 aa5.34□□□□□ -1.55
SMC5-202ENST00000471372 KLRC3Q07444 240 aa5.34□□□□□ -1.55
SMC5-202ENST00000471372 BST2Q10589 180 aaKnown RBP5.34□□□□□ -1.55
SMC5-202ENST00000471372 CYLC2Q14093 348 aaPredicted RBP5.34□□□□□ -1.55
SMC5-202ENST00000471372 C9orf66Q5T8R8 295 aa5.34□□□□□ -1.55
SMC5-202ENST00000471372 MEDAGQ5VYS4 303 aa5.34□□□□□ -1.55
SMC5-202ENST00000471372 ERICH1Q86X53 443 aa5.34□□□□□ -1.55
SMC5-202ENST00000471372 PSTKQ8IV42 348 aaKnown RBP5.34□□□□□ -1.55
SMC5-202ENST00000471372 ATP6V0D2Q8N8Y2 350 aa5.34□□□□□ -1.55
SMC5-202ENST00000471372 OR2L3Q8NG85 312 aa5.34□□□□□ -1.55
SMC5-202ENST00000471372 IL1F10Q8WWZ1 152 aa5.34□□□□□ -1.55
SMC5-202ENST00000471372 TMEM80Q96HE8 168 aa5.34□□□□□ -1.55
SMC5-202ENST00000471372 SLC45A3Q96JT2 553 aa5.34□□□□□ -1.55
SMC5-202ENST00000471372 C9orf85Q96MD7 179 aa5.34□□□□□ -1.55
SMC5-202ENST00000471372 FMO2Q99518 471 aa5.34□□□□□ -1.55
SMC5-202ENST00000471372 CHCHD5Q9BSY4 110 aa5.34□□□□□ -1.55
SMC5-202ENST00000471372 ANKRA2Q9H9E1 313 aa5.34□□□□□ -1.55
SMC5-202ENST00000471372 NEK6Q9HC98 313 aa5.34□□□□□ -1.55
SMC5-202ENST00000471372 EXOSC3Q9NQT5 275 aaKnown RBP5.34□□□□□ -1.55
SMC5-202ENST00000471372 PPIAL4AQ9Y536 164 aa5.34□□□□□ -1.55
SMC5-202ENST00000471372 TCP11X1B4DZS4 312 aa5.33□□□□□ -1.56
SMC5-202ENST00000471372 WRBO00258 174 aa5.33□□□□□ -1.56
SMC5-202ENST00000471372 KCNAB3O43448 404 aa5.33□□□□□ -1.56
SMC5-202ENST00000471372 IGHG4P01861 327 aa5.33□□□□□ -1.56
SMC5-202ENST00000471372 TROVE2P10155 538 aaKnown RBP eCLIP5.33□□□□□ -1.56
SMC5-202ENST00000471372 GNA11P29992 359 aa5.33□□□□□ -1.56
SMC5-202ENST00000471372 RIPK4P57078 832 aa5.33□□□□□ -1.56
SMC5-202ENST00000471372 VLDLRP98155 873 aa5.33□□□□□ -1.56
SMC5-202ENST00000471372 CD300CQ08708 224 aa5.33□□□□□ -1.56
SMC5-202ENST00000471372 ABRAXAS2Q15018 415 aa5.33□□□□□ -1.56
SMC5-202ENST00000471372 ALKBH6Q3KRA9 238 aa5.33□□□□□ -1.56
SMC5-202ENST00000471372 XKR7Q5GH72 579 aa5.33□□□□□ -1.56
SMC5-202ENST00000471372 C18orf65Q6ZTR6 163 aa5.33□□□□□ -1.56
SMC5-202ENST00000471372 USP43Q70EL4 1123 aa5.33□□□□□ -1.56
SMC5-202ENST00000471372 BIVMQ86UB2 503 aa5.33□□□□□ -1.56
SMC5-202ENST00000471372 OFCC1Q8IZS5 231 aa5.33□□□□□ -1.56
SMC5-202ENST00000471372 OR2L13Q8N349 312 aa5.33□□□□□ -1.56
SMC5-202ENST00000471372 BEST4Q8NFU0 473 aa5.33□□□□□ -1.56
SMC5-202ENST00000471372 MIPOL1Q8TD10 442 aa5.33□□□□□ -1.56
SMC5-202ENST00000471372 MAGEE2Q8TD90 523 aaPredicted RBP5.33□□□□□ -1.56
SMC5-202ENST00000471372 ARNTL2Q8WYA1 636 aa5.33□□□□□ -1.56
SMC5-202ENST00000471372 EFHD2Q96C19 240 aaPredicted RBP5.33□□□□□ -1.56
SMC5-202ENST00000471372 FAF2Q96CS3 445 aa5.33□□□□□ -1.56
SMC5-202ENST00000471372 TM4SF19Q96DZ7 209 aa5.33□□□□□ -1.56
SMC5-202ENST00000471372 CELF6Q96J87 481 aaKnown RBP5.33□□□□□ -1.56
SMC5-202ENST00000471372 CYP2S1Q96SQ9 504 aa5.33□□□□□ -1.56
SMC5-202ENST00000471372 ATF6BQ99941 703 aa5.33□□□□□ -1.56
SMC5-202ENST00000471372 MTG1Q9BT17 334 aaPredicted RBP5.33□□□□□ -1.56
SMC5-202ENST00000471372 HCAR1Q9BXC0 346 aa5.33□□□□□ -1.56
SMC5-202ENST00000471372 FGFBP2Q9BYJ0 223 aa5.33□□□□□ -1.56
SMC5-202ENST00000471372 PPDPFQ9H3Y8 114 aa5.33□□□□□ -1.56
SMC5-202ENST00000471372 AMBNQ9NP70 447 aa5.33□□□□□ -1.56
SMC5-202ENST00000471372 RPRD1BQ9NQG5 326 aaKnown RBP5.33□□□□□ -1.56
SMC5-202ENST00000471372 PDE10AQ9Y233 779 aa5.33□□□□□ -1.56
SMC5-202ENST00000471372 CSDC2Q9Y534 153 aaKnown RBP5.33□□□□□ -1.56
SMC5-202ENST00000471372 A0A1B0GTH9 108 aa5.32□□□□□ -1.56
SMC5-202ENST00000471372 VSTM2BA6NLU5 285 aa5.32□□□□□ -1.56
SMC5-202ENST00000471372 PP2D1A8MPX8 630 aa5.32□□□□□ -1.56
SMC5-202ENST00000471372 AP2A1O95782 977 aa5.32□□□□□ -1.56
SMC5-202ENST00000471372 CD55P08174 381 aa5.32□□□□□ -1.56
SMC5-202ENST00000471372 SERPINA2P20848 420 aa5.32□□□□□ -1.56
SMC5-202ENST00000471372 RFC4P35249 363 aa5.32□□□□□ -1.56
SMC5-202ENST00000471372 FDFT1P37268 417 aa5.32□□□□□ -1.56
SMC5-202ENST00000471372 QARSP47897 775 aaKnown RBP5.32□□□□□ -1.56
SMC5-202ENST00000471372 ALDH3B2P48448 385 aa5.32□□□□□ -1.56
SMC5-202ENST00000471372 PRELPP51888 382 aa5.32□□□□□ -1.56
SMC5-202ENST00000471372 ARHGDIBP52566 201 aa5.32□□□□□ -1.56
SMC5-202ENST00000471372 HILS1P60008 231 aa5.32□□□□□ -1.56
SMC5-202ENST00000471372 CDK16Q00536 496 aa5.32□□□□□ -1.56
SMC5-202ENST00000471372 KRTAP24-1Q3LI83 254 aa5.32□□□□□ -1.56
SMC5-202ENST00000471372 CAVIN4Q5BKX8 364 aa5.32□□□□□ -1.56
SMC5-202ENST00000471372 VWA2Q5GFL6 755 aa5.32□□□□□ -1.56
SMC5-202ENST00000471372 SPANXN2Q5MJ10 180 aa5.32□□□□□ -1.56
SMC5-202ENST00000471372 C1orf220Q5T0J3 134 aa5.32□□□□□ -1.56
SMC5-202ENST00000471372 OTUD3Q5T2D3 398 aaPredicted RBP5.32□□□□□ -1.56
SMC5-202ENST00000471372 ENPP6Q6UWR7 440 aa5.32□□□□□ -1.56
SMC5-202ENST00000471372 TMEM107Q6UX40 140 aa5.32□□□□□ -1.56
SMC5-202ENST00000471372 SLC47A2Q86VL8 602 aa5.32□□□□□ -1.56
SMC5-202ENST00000471372 SERPINA9Q86WD7 417 aa5.32□□□□□ -1.56
SMC5-202ENST00000471372 TRPV1Q8NER1 839 aa5.32□□□□□ -1.56
SMC5-202ENST00000471372 HCAR2Q8TDS4 363 aa5.32□□□□□ -1.56
SMC5-202ENST00000471372 NPRL2Q8WTW4 380 aa5.32□□□□□ -1.56
SMC5-202ENST00000471372 PEX13Q92968 403 aa5.32□□□□□ -1.56
SMC5-202ENST00000471372 CHP1Q99653 195 aa5.32□□□□□ -1.56
SMC5-202ENST00000471372 NARFLQ9H6Q4 476 aa5.32□□□□□ -1.56
SMC5-202ENST00000471372 JPT2Q9H910 190 aa5.32□□□□□ -1.56
SMC5-202ENST00000471372 SCRT2Q9NQ03 307 aa5.32□□□□□ -1.56
SMC5-202ENST00000471372 ABCG2Q9UNQ0 655 aa5.32□□□□□ -1.56
SMC5-202ENST00000471372 MRPL11Q9Y3B7 192 aaKnown RBP5.32□□□□□ -1.56
SMC5-202ENST00000471372 CCT8L1PA6NM43 557 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms