RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 ZDHHC11BP0C7U3 371 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 IMPA1P29218 277 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 SLC11A1P49279 550 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 RAB13P51153 203 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 P2RX3P56373 397 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 GNB2P62879 340 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 TMEM115Q12893 351 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-210ENST00000471181 MEF2DQ14814 521 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 KCNJ8Q15842 424 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 RABEPKQ7Z6M1 372 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 ZNF761Q86XN6 746 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-210ENST00000471181 CMTM8Q8IZV2 173 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 CERS5Q8N5B7 392 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 SUMF1Q8NBK3 374 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 NECAP1Q8NC96 275 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 OR13C9Q8NGT0 318 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 MUCL1Q96DR8 90 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 SERINC2Q96SA4 455 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 DPH1Q9BZG8 443 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 SLC6A14Q9UN76 642 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 CBY1Q9Y3M2 126 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 TMEM184BQ9Y519 407 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-210ENST00000471181 AQP7P3A6NL99 342 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 DLX3O60479 287 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 HLA-HP01893 362 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 PROS1P07225 676 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 TRAPPC2P0DI81 140 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 TRAPPC2BP0DI82 140 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 CD1BP29016 333 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 RPL26P61254 145 aaKnown RBP6.5□□□□□ -1.37
BRCA1-210ENST00000471181 ILKQ13418 452 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 MLF2Q15773 248 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-210ENST00000471181 RPS26P11Q5JNZ5 115 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-210ENST00000471181 TUSC5Q8IXB3 177 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 NRMQ8IXM6 262 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 NHLRC2Q8NBF2 726 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 OR8J1Q8NGP2 316 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 M1APQ8TC57 530 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 ASB11Q8WXH4 323 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 FOXJ1Q92949 421 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 HHIPQ96QV1 700 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 F2RL3Q96RI0 385 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 INTS14Q96SY0 518 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 SLC29A1Q99808 456 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 DERL2Q9GZP9 239 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 OR51J1Q9H342 316 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 TM7SF3Q9NS93 570 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 AIG1Q9NVV5 245 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 BABAM2Q9NXR7 383 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 DTLQ9NZJ0 730 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 ASB4Q9Y574 426 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 LOC102723971A0A1B0GUV8 181 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 A0A1W2PP55 124 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 hCG_1809904A0A1W2PP81 198 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 A0A1W2PPE2 198 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 A0A1W2PR64 198 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 TMEM235A6NFC5 223 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 SULT2B1O00204 365 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 DPM1O60762 260 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 TBX10O75333 385 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 PENKP01210 267 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-210ENST00000471181 HLA-AP01891 365 aaKnown RBP6.5□□□□□ -1.37
BRCA1-210ENST00000471181 BMP1P13497 986 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 NFYBP25208 207 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 IL3RAP26951 378 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 CRABP1P29762 137 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 MRPL19P49406 292 aaKnown RBP6.5□□□□□ -1.37
BRCA1-210ENST00000471181 RPS15AP62244 130 aaKnown RBP6.5□□□□□ -1.37
BRCA1-210ENST00000471181 BAMBIQ13145 260 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 OR5I1Q13606 314 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 SLC35G1Q2M3R5 365 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 TUSC1Q2TAM9 212 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 DEFB110Q30KQ9 67 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 DHRS11Q6UWP2 260 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 FAM57BQ71RH2 274 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 C1orf127Q8N9H9 656 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 CLEC1AQ8NC01 280 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 SDR9C7Q8NEX9 313 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 OR2M3Q8NG83 312 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 OR8J2Q8NGG1 315 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 BRIX1Q8TDN6 353 aaKnown RBP6.5□□□□□ -1.37
BRCA1-210ENST00000471181 ZFP90Q8TF47 636 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 WDR92Q96MX6 357 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 ZNF599Q96NL3 588 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 S1PR3Q99500 378 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 CRB3Q9BUF7 120 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 ALG8Q9BVK2 526 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 TMPRSS5Q9H3S3 457 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 EBF1Q9UH73 591 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 URGCP-MRPS24S4R325 110 aa6.5□□□□□ -1.37
BRCA1-210ENST00000471181 OLFM2O95897 454 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 INHAP05111 366 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 CT45A10P0DMU9 189 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 ETV3P41162 512 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 UBE2IP63279 158 aaKnown RBP6.49□□□□□ -1.37
BRCA1-210ENST00000471181 INCA1Q0VD86 236 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 KCNAB2Q13303 367 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 DUSP28Q4G0W2 176 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 CNIH2Q6PI25 160 aa6.49□□□□□ -1.37
BRCA1-210ENST00000471181 EPGNQ6UW88 154 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms