RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 NTN1O95631 604 aa15.56■□□□□ 0.08
COL7A1-208ENST00000470076 YES1P07947 543 aa15.56■□□□□ 0.08
COL7A1-208ENST00000470076 UBL4AP11441 157 aa15.56■□□□□ 0.08
COL7A1-208ENST00000470076 SLC7A1P30825 629 aa15.56■□□□□ 0.08
COL7A1-208ENST00000470076 RNF144AP50876 292 aaPredicted RBP15.56■□□□□ 0.08
COL7A1-208ENST00000470076 C21orf58P58505 322 aa15.56■□□□□ 0.08
COL7A1-208ENST00000470076 HBA1P69905 142 aa15.56■□□□□ 0.08
COL7A1-208ENST00000470076 ZNF844Q08AG5 666 aa15.56■□□□□ 0.08
COL7A1-208ENST00000470076 SFRP5Q5T4F7 317 aa15.56■□□□□ 0.08
COL7A1-208ENST00000470076 NUFIP2Q7Z417 695 aaKnown RBP15.56■□□□□ 0.08
COL7A1-208ENST00000470076 OR5W2Q8NH69 310 aa15.56■□□□□ 0.08
COL7A1-208ENST00000470076 OR5AK3PQ8NH89 298 aa15.56■□□□□ 0.08
COL7A1-208ENST00000470076 NUDT8Q8WV74 236 aa15.56■□□□□ 0.08
COL7A1-208ENST00000470076 ARL8AQ96BM9 186 aa15.56■□□□□ 0.08
COL7A1-208ENST00000470076 SDF2Q99470 211 aa15.56■□□□□ 0.08
COL7A1-208ENST00000470076 USB1Q9BQ65 265 aaKnown RBP15.56■□□□□ 0.08
COL7A1-208ENST00000470076 NMUR2Q9GZQ4 415 aa15.56■□□□□ 0.08
COL7A1-208ENST00000470076 ANKZF1Q9H8Y5 726 aa15.56■□□□□ 0.08
COL7A1-208ENST00000470076 ETV2O00321 342 aaPredicted RBP15.55■□□□□ 0.08
COL7A1-208ENST00000470076 AK1P00568 194 aa15.55■□□□□ 0.08
COL7A1-208ENST00000470076 BPGMP07738 259 aa15.55■□□□□ 0.08
COL7A1-208ENST00000470076 G6PDP11413 515 aa15.55■□□□□ 0.08
COL7A1-208ENST00000470076 IL32P24001 234 aa15.55■□□□□ 0.08
COL7A1-208ENST00000470076 SOAT1P35610 550 aa15.55■□□□□ 0.08
COL7A1-208ENST00000470076 CLDN8P56748 225 aa15.55■□□□□ 0.08
COL7A1-208ENST00000470076 RAC3P60763 192 aa15.55■□□□□ 0.08
COL7A1-208ENST00000470076 EMX2Q04743 252 aa15.55■□□□□ 0.08
COL7A1-208ENST00000470076 CBFBQ13951 182 aa15.55■□□□□ 0.08
COL7A1-208ENST00000470076 P2RY6Q15077 328 aa15.55■□□□□ 0.08
COL7A1-208ENST00000470076 NDUFAF6Q330K2 333 aa15.55■□□□□ 0.08
COL7A1-208ENST00000470076 ADAM5Q6NVV9 412 aa15.55■□□□□ 0.08
COL7A1-208ENST00000470076 TMCO5AQ8N6Q1 288 aa15.55■□□□□ 0.08
COL7A1-208ENST00000470076 ATP6V1C2Q8NEY4 427 aa15.55■□□□□ 0.08
COL7A1-208ENST00000470076 OR5D16Q8NGK9 328 aa15.55■□□□□ 0.08
COL7A1-208ENST00000470076 RFWD2Q8NHY2 731 aa15.55■□□□□ 0.08
COL7A1-208ENST00000470076 HSD17B8Q92506 261 aa15.55■□□□□ 0.08
COL7A1-208ENST00000470076 AKAP1Q92667 903 aaKnown RBP eCLIP15.55■□□□□ 0.08
COL7A1-208ENST00000470076 ESRP2Q9H6T0 727 aaKnown RBP15.55■□□□□ 0.08
COL7A1-208ENST00000470076 ASIC5Q9NY37 505 aa15.55■□□□□ 0.08
COL7A1-208ENST00000470076 KLHL9Q9P2J3 617 aa15.55■□□□□ 0.08
COL7A1-208ENST00000470076 SERINC4A6NH21 518 aa15.54■□□□□ 0.08
COL7A1-208ENST00000470076 CCR4P51679 360 aa15.54■□□□□ 0.08
COL7A1-208ENST00000470076 ITGADQ13349 1161 aa15.54■□□□□ 0.08
COL7A1-208ENST00000470076 QPRTQ15274 297 aa15.54■□□□□ 0.08
COL7A1-208ENST00000470076 SMU1Q2TAY7 513 aa15.54■□□□□ 0.08
COL7A1-208ENST00000470076 PGS1Q32NB8 556 aa15.54■□□□□ 0.08
COL7A1-208ENST00000470076 PDZK1Q5T2W1 519 aa15.54■□□□□ 0.08
COL7A1-208ENST00000470076 ALKBH2Q6NS38 261 aa15.54■□□□□ 0.08
COL7A1-208ENST00000470076 KISS1RQ969F8 398 aaPredicted RBP15.54■□□□□ 0.08
COL7A1-208ENST00000470076 ZIM3Q96PE6 472 aa15.54■□□□□ 0.08
COL7A1-208ENST00000470076 BCO1Q9HAY6 547 aa15.54■□□□□ 0.08
COL7A1-208ENST00000470076 NOP53Q9NZM5 478 aaKnown RBP15.54■□□□□ 0.08
COL7A1-208ENST00000470076 RNF115Q9Y4L5 304 aa15.54■□□□□ 0.08
COL7A1-208ENST00000470076 CADP27708 2225 aa15.53■□□□□ 0.08
COL7A1-208ENST00000470076 ESPNB1AK53 854 aa15.53■□□□□ 0.08
COL7A1-208ENST00000470076 TYROBPO43914 113 aa15.53■□□□□ 0.08
COL7A1-208ENST00000470076 STX11O75558 287 aa15.53■□□□□ 0.08
COL7A1-208ENST00000470076 ADAP00813 363 aa15.53■□□□□ 0.08
COL7A1-208ENST00000470076 MATN1P21941 496 aa15.53■□□□□ 0.08
COL7A1-208ENST00000470076 ENPP1P22413 925 aa15.53■□□□□ 0.08
COL7A1-208ENST00000470076 ETV4P43268 484 aa15.53■□□□□ 0.08
COL7A1-208ENST00000470076 ATP5J2P56134 94 aa15.53■□□□□ 0.08
COL7A1-208ENST00000470076 RPS4XP62701 263 aaKnown RBP15.53■□□□□ 0.08
COL7A1-208ENST00000470076 RPS26P62854 115 aaKnown RBP15.53■□□□□ 0.08
COL7A1-208ENST00000470076 TSC22D1Q15714 1073 aa15.53■□□□□ 0.08
COL7A1-208ENST00000470076 GPR68Q15743 365 aa15.53■□□□□ 0.08
COL7A1-208ENST00000470076 TAB1Q15750 504 aa15.53■□□□□ 0.08
COL7A1-208ENST00000470076 ZNF141Q15928 474 aa15.53■□□□□ 0.08
COL7A1-208ENST00000470076 NCMAPQ5T1S8 102 aa15.53■□□□□ 0.08
COL7A1-208ENST00000470076 C3orf33Q6P1S2 294 aa15.53■□□□□ 0.08
COL7A1-208ENST00000470076 C6orf120Q7Z4R8 191 aa15.53■□□□□ 0.08
COL7A1-208ENST00000470076 RAB3IL1Q8TBN0 382 aa15.53■□□□□ 0.08
COL7A1-208ENST00000470076 ST8SIA1Q92185 356 aa15.53■□□□□ 0.08
COL7A1-208ENST00000470076 ZNF524Q96C55 264 aa15.53■□□□□ 0.08
COL7A1-208ENST00000470076 PSD2Q9BQI7 771 aa15.53■□□□□ 0.08
COL7A1-208ENST00000470076 POTEKPQ9BYX7 375 aa15.53■□□□□ 0.08
COL7A1-208ENST00000470076 LAT2Q9GZY6 243 aa15.53■□□□□ 0.08
COL7A1-208ENST00000470076 LAMP3Q9UQV4 416 aa15.53■□□□□ 0.08
COL7A1-208ENST00000470076 RNF103-CHMP3A0A140T963 221 aa15.52■□□□□ 0.08
COL7A1-208ENST00000470076 A0A1W2PNR3 127 aa15.52■□□□□ 0.08
COL7A1-208ENST00000470076 RNASET2O00584 256 aaKnown RBP15.52■□□□□ 0.08
COL7A1-208ENST00000470076 DNAJA2O60884 412 aa15.52■□□□□ 0.08
COL7A1-208ENST00000470076 CD3EP07766 207 aa15.52■□□□□ 0.08
COL7A1-208ENST00000470076 CREB1P16220 341 aa15.52■□□□□ 0.08
COL7A1-208ENST00000470076 OR3A2P47893 321 aa15.52■□□□□ 0.08
COL7A1-208ENST00000470076 VSNL1P62760 191 aa15.52■□□□□ 0.08
COL7A1-208ENST00000470076 SKP2Q13309 424 aa15.52■□□□□ 0.08
COL7A1-208ENST00000470076 ARHGAP11BQ3KRB8 267 aa15.52■□□□□ 0.08
COL7A1-208ENST00000470076 TIGD2Q4W5G0 525 aa15.52■□□□□ 0.08
COL7A1-208ENST00000470076 OR4F3Q6IEY1 312 aa15.52■□□□□ 0.08
COL7A1-208ENST00000470076 Q6ZT83 130 aa15.52■□□□□ 0.08
COL7A1-208ENST00000470076 NUDCD3Q8IVD9 361 aa15.52■□□□□ 0.08
COL7A1-208ENST00000470076 CLECL1Q8IZS7 167 aa15.52■□□□□ 0.08
COL7A1-208ENST00000470076 OIT3Q8WWZ8 545 aa15.52■□□□□ 0.08
COL7A1-208ENST00000470076 TMEM234Q8WY98 164 aa15.52■□□□□ 0.08
COL7A1-208ENST00000470076 FBXW5Q969U6 566 aa15.52■□□□□ 0.08
COL7A1-208ENST00000470076 SLC35G5Q96KT7 338 aa15.52■□□□□ 0.08
COL7A1-208ENST00000470076 OR5B2Q96R09 309 aa15.52■□□□□ 0.08
COL7A1-208ENST00000470076 THUMPD3Q9BV44 507 aaKnown RBP15.52■□□□□ 0.08
COL7A1-208ENST00000470076 SERHL2Q9H4I8 314 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms