RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 C7orf66A4D0T2 115 aa12.63□□□□□ -0.39
BRCA1-209ENST00000470026 HYAL3O43820 417 aaPredicted RBP12.63□□□□□ -0.39
BRCA1-209ENST00000470026 BRINP1O60477 761 aa12.63□□□□□ -0.39
BRCA1-209ENST00000470026 REM1O75628 298 aa12.63□□□□□ -0.39
BRCA1-209ENST00000470026 GUSBP08236 651 aa12.63□□□□□ -0.39
BRCA1-209ENST00000470026 LAMP2P13473 410 aa12.63□□□□□ -0.39
BRCA1-209ENST00000470026 MYOGP15173 224 aa12.63□□□□□ -0.39
BRCA1-209ENST00000470026 DRD5P21918 477 aa12.63□□□□□ -0.39
BRCA1-209ENST00000470026 NOS3P29474 1203 aa12.63□□□□□ -0.39
BRCA1-209ENST00000470026 ACSL1P33121 698 aa12.63□□□□□ -0.39
BRCA1-209ENST00000470026 BMP8BP34820 402 aa12.63□□□□□ -0.39
BRCA1-209ENST00000470026 TALDO1P37837 337 aa12.63□□□□□ -0.39
BRCA1-209ENST00000470026 FHL1Q13642 323 aa12.63□□□□□ -0.39
BRCA1-209ENST00000470026 PRICKLE4Q2TBC4 344 aa12.63□□□□□ -0.39
BRCA1-209ENST00000470026 FAM27D1Q5T7N8 215 aa12.63□□□□□ -0.39
BRCA1-209ENST00000470026 PYHIN1Q6K0P9 492 aa12.63□□□□□ -0.39
BRCA1-209ENST00000470026 ARL9Q6T311 187 aa12.63□□□□□ -0.39
BRCA1-209ENST00000470026 BMP8AQ7Z5Y6 402 aa12.63□□□□□ -0.39
BRCA1-209ENST00000470026 CDK20Q8IZL9 346 aa12.63□□□□□ -0.39
BRCA1-209ENST00000470026 C17orf47Q8NEP4 570 aa12.63□□□□□ -0.39
BRCA1-209ENST00000470026 ZCCHC10Q8TBK6 192 aa12.63□□□□□ -0.39
BRCA1-209ENST00000470026 RSC1A1Q92681 617 aa12.63□□□□□ -0.39
BRCA1-209ENST00000470026 NACC2Q96BF6 587 aa12.63□□□□□ -0.39
BRCA1-209ENST00000470026 ARMC5Q96C12 935 aa12.63□□□□□ -0.39
BRCA1-209ENST00000470026 CTHRC1Q96CG8 243 aa12.63□□□□□ -0.39
BRCA1-209ENST00000470026 ART5Q96L15 291 aa12.63□□□□□ -0.39
BRCA1-209ENST00000470026 GALNT9Q9HCQ5 603 aa12.63□□□□□ -0.39
BRCA1-209ENST00000470026 NPFFR2Q9Y5X5 522 aa12.63□□□□□ -0.39
BRCA1-209ENST00000470026 DOCK8Q8NF50 2099 aa12.63□□□□□ -0.39
BRCA1-209ENST00000470026 A0A0B4J2E0 115 aa12.62□□□□□ -0.39
BRCA1-209ENST00000470026 A0A1B0GX12 115 aa12.62□□□□□ -0.39
BRCA1-209ENST00000470026 K7EQS6 105 aa12.62□□□□□ -0.39
BRCA1-209ENST00000470026 ERVH48-1M5A8F1 160 aa12.62□□□□□ -0.39
BRCA1-209ENST00000470026 CYR61O00622 381 aa12.62□□□□□ -0.39
BRCA1-209ENST00000470026 RFPL3O75679 317 aa12.62□□□□□ -0.39
BRCA1-209ENST00000470026 UGT2B7P16662 529 aa12.62□□□□□ -0.39
BRCA1-209ENST00000470026 ZNF10P21506 573 aaPredicted RBP12.62□□□□□ -0.39
BRCA1-209ENST00000470026 AK4P27144 223 aaPredicted RBP12.62□□□□□ -0.39
BRCA1-209ENST00000470026 TNFRSF4P43489 277 aa12.62□□□□□ -0.39
BRCA1-209ENST00000470026 OR10A3P58181 314 aa12.62□□□□□ -0.39
BRCA1-209ENST00000470026 GNG2P59768 71 aa12.62□□□□□ -0.39
BRCA1-209ENST00000470026 KLHL12Q53G59 568 aa12.62□□□□□ -0.39
BRCA1-209ENST00000470026 FIGLAQ6QHK4 219 aa12.62□□□□□ -0.39
BRCA1-209ENST00000470026 CREB3L2Q70SY1 520 aa12.62□□□□□ -0.39
BRCA1-209ENST00000470026 ABHD13Q7L211 337 aa12.62□□□□□ -0.39
BRCA1-209ENST00000470026 GPR135Q8IZ08 494 aa12.62□□□□□ -0.39
BRCA1-209ENST00000470026 GHDCQ8N2G8 530 aa12.62□□□□□ -0.39
BRCA1-209ENST00000470026 COX18Q8N8Q8 333 aa12.62□□□□□ -0.39
BRCA1-209ENST00000470026 CAMKVQ8NCB2 501 aa12.62□□□□□ -0.39
BRCA1-209ENST00000470026 HAVCR2Q8TDQ0 301 aa12.62□□□□□ -0.39
BRCA1-209ENST00000470026 SCMH1Q96GD3 660 aa12.62□□□□□ -0.39
BRCA1-209ENST00000470026 ZNF559Q9BR84 538 aa12.62□□□□□ -0.39
BRCA1-209ENST00000470026 IFT27Q9BW83 186 aa12.62□□□□□ -0.39
BRCA1-209ENST00000470026 HDHD2Q9H0R4 259 aa12.62□□□□□ -0.39
BRCA1-209ENST00000470026 ADAP2Q9NPF8 381 aa12.62□□□□□ -0.39
BRCA1-209ENST00000470026 MAT2BQ9NZL9 334 aa12.62□□□□□ -0.39
BRCA1-209ENST00000470026 ST6GALNAC2Q9UJ37 374 aa12.62□□□□□ -0.39
BRCA1-209ENST00000470026 TRAV1-2A0A0B4J238 106 aa12.62□□□□□ -0.39
BRCA1-209ENST00000470026 POM121BA6NF01 834 aa12.62□□□□□ -0.39
BRCA1-209ENST00000470026 CHP2O43745 196 aa12.62□□□□□ -0.39
BRCA1-209ENST00000470026 FGF17O60258 216 aa12.62□□□□□ -0.39
BRCA1-209ENST00000470026 SOX30O94993 753 aa12.62□□□□□ -0.39
BRCA1-209ENST00000470026 MAT2AP31153 395 aaKnown RBP12.62□□□□□ -0.39
BRCA1-209ENST00000470026 EVI2BP34910 448 aa12.62□□□□□ -0.39
BRCA1-209ENST00000470026 NRG3P56975 720 aa12.62□□□□□ -0.39
BRCA1-209ENST00000470026 ACTC1P68032 377 aa12.62□□□□□ -0.39
BRCA1-209ENST00000470026 ACTA1P68133 377 aa12.62□□□□□ -0.39
BRCA1-209ENST00000470026 C19orf57Q0VDD7 668 aa12.62□□□□□ -0.39
BRCA1-209ENST00000470026 SLC36A2Q495M3 483 aa12.62□□□□□ -0.39
BRCA1-209ENST00000470026 IL20RBQ6UXL0 311 aa12.62□□□□□ -0.39
BRCA1-209ENST00000470026 CEACAM19Q7Z692 300 aa12.62□□□□□ -0.39
BRCA1-209ENST00000470026 LSRQ86X29 649 aaPredicted RBP12.62□□□□□ -0.39
BRCA1-209ENST00000470026 GRAMD2AQ8IUY3 354 aa12.62□□□□□ -0.39
BRCA1-209ENST00000470026 MS4A15Q8N5U1 240 aa12.62□□□□□ -0.39
BRCA1-209ENST00000470026 SAMD12Q8N8I0 201 aa12.62□□□□□ -0.39
BRCA1-209ENST00000470026 DEDD2Q8WXF8 326 aa12.62□□□□□ -0.39
BRCA1-209ENST00000470026 C4orf36Q96KX1 117 aa12.62□□□□□ -0.39
BRCA1-209ENST00000470026 ABHD1Q96SE0 405 aa12.62□□□□□ -0.39
BRCA1-209ENST00000470026 SERTAD3Q9UJW9 196 aa12.62□□□□□ -0.39
BRCA1-209ENST00000470026 CACNG2Q9Y698 323 aa12.62□□□□□ -0.39
BRCA1-209ENST00000470026 NPIPA5A0A0B4J1W7 369 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 SLC9B1P1A6NJY1 282 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 RIIAD1A6NNX1 92 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 NPIPA7E9PJI5 369 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 SLC31A1O15431 190 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 OGG1O15527 345 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 ARHGEF9O43307 516 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 CPNE3O75131 537 aaKnown RBP12.61□□□□□ -0.39
BRCA1-209ENST00000470026 NKX2-2O95096 273 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 GPR75O95800 540 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 CD1AP06126 327 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 NPIPA8P0DM63 369 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 PEPDP12955 493 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 RBM34P42696 430 aaKnown RBP12.61□□□□□ -0.39
BRCA1-209ENST00000470026 PPP2CBP62714 309 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 PPP2CAP67775 309 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 POU4F2Q12837 409 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 GPM6BQ13491 265 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 CRMP1Q14194 572 aa12.61□□□□□ -0.39
BRCA1-209ENST00000470026 NFATC4Q14934 902 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms