RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 NDUFS6O75380 124 aaKnown RBP16.81■□□□□ 0.28
SNAPC3-205ENST00000467062 PEX14O75381 377 aa16.81■□□□□ 0.28
SNAPC3-205ENST00000467062 HPP00738 406 aa16.81■□□□□ 0.28
SNAPC3-205ENST00000467062 GIPP09681 153 aaPredicted RBP16.81■□□□□ 0.28
SNAPC3-205ENST00000467062 ZNF806P0C7X5 589 aa16.81■□□□□ 0.28
SNAPC3-205ENST00000467062 PRR23D2P0DMB1 279 aaPredicted RBP16.81■□□□□ 0.28
SNAPC3-205ENST00000467062 GABRA1P14867 456 aa16.81■□□□□ 0.28
SNAPC3-205ENST00000467062 RAP2BP61225 183 aa16.81■□□□□ 0.28
SNAPC3-205ENST00000467062 TMEM240Q5SV17 173 aa16.81■□□□□ 0.28
SNAPC3-205ENST00000467062 SIAH3Q8IW03 269 aa16.81■□□□□ 0.28
SNAPC3-205ENST00000467062 ARIH2OSQ8N7S6 290 aa16.81■□□□□ 0.28
SNAPC3-205ENST00000467062 TM4SF18Q96CE8 201 aa16.81■□□□□ 0.28
SNAPC3-205ENST00000467062 ARHGAP9Q9BRR9 750 aa16.81■□□□□ 0.28
SNAPC3-205ENST00000467062 NLGN3Q9NZ94 848 aa16.81■□□□□ 0.28
SNAPC3-205ENST00000467062 MED11Q9P086 117 aa16.81■□□□□ 0.28
SNAPC3-205ENST00000467062 SERGEFQ9UGK8 458 aa16.81■□□□□ 0.28
SNAPC3-205ENST00000467062 ST8SIA5O15466 376 aa16.8■□□□□ 0.28
SNAPC3-205ENST00000467062 OR1F1O43749 312 aa16.8■□□□□ 0.28
SNAPC3-205ENST00000467062 TLX2O43763 284 aaPredicted RBP16.8■□□□□ 0.28
SNAPC3-205ENST00000467062 TMPRSS11DO60235 418 aa16.8■□□□□ 0.28
SNAPC3-205ENST00000467062 SOX30O94993 753 aa16.8■□□□□ 0.28
SNAPC3-205ENST00000467062 PAK4O96013 591 aaPredicted RBP16.8■□□□□ 0.28
SNAPC3-205ENST00000467062 S100A8P05109 93 aa16.8■□□□□ 0.28
SNAPC3-205ENST00000467062 HES5Q5TA89 166 aa16.8■□□□□ 0.28
SNAPC3-205ENST00000467062 SLC22A10Q63ZE4 541 aa16.8■□□□□ 0.28
SNAPC3-205ENST00000467062 IKBIPQ70UQ0 350 aa16.8■□□□□ 0.28
SNAPC3-205ENST00000467062 WDR53Q7Z5U6 358 aaPredicted RBP16.8■□□□□ 0.28
SNAPC3-205ENST00000467062 JAZF1Q86VZ6 243 aa16.8■□□□□ 0.28
SNAPC3-205ENST00000467062 OR5D16Q8NGK9 328 aa16.8■□□□□ 0.28
SNAPC3-205ENST00000467062 SUSD6Q92537 303 aa16.8■□□□□ 0.28
SNAPC3-205ENST00000467062 CXorf40BQ96DE9 158 aa16.8■□□□□ 0.28
SNAPC3-205ENST00000467062 LCORQ96JN0 433 aaPredicted RBP16.8■□□□□ 0.28
SNAPC3-205ENST00000467062 TMED9Q9BVK6 235 aa16.8■□□□□ 0.28
SNAPC3-205ENST00000467062 DPEP2Q9H4A9 486 aa16.8■□□□□ 0.28
SNAPC3-205ENST00000467062 TMEM38AQ9H6F2 299 aa16.8■□□□□ 0.28
SNAPC3-205ENST00000467062 TBC1D17Q9HA65 648 aa16.8■□□□□ 0.28
SNAPC3-205ENST00000467062 EXOSC1Q9Y3B2 195 aaKnown RBP16.8■□□□□ 0.28
SNAPC3-205ENST00000467062 PLEKHM1Q9Y4G2 1056 aa16.8■□□□□ 0.28
SNAPC3-205ENST00000467062 SHISA3A0PJX4 238 aa16.8■□□□□ 0.28
SNAPC3-205ENST00000467062 CHURC1-FNTBB4DL54 471 aa16.8■□□□□ 0.28
SNAPC3-205ENST00000467062 ACAA1P09110 424 aaPredicted RBP16.8■□□□□ 0.28
SNAPC3-205ENST00000467062 NPR2P20594 1047 aa16.8■□□□□ 0.28
SNAPC3-205ENST00000467062 CD96P40200 585 aa16.8■□□□□ 0.28
SNAPC3-205ENST00000467062 LSM11P83369 360 aaKnown RBP eCLIP16.8■□□□□ 0.28
SNAPC3-205ENST00000467062 LGALS3BPQ08380 585 aa16.8■□□□□ 0.28
SNAPC3-205ENST00000467062 SLC25A30Q5SVS4 291 aa16.8■□□□□ 0.28
SNAPC3-205ENST00000467062 KHDRBS2Q5VWX1 349 aaKnown RBP16.8■□□□□ 0.28
SNAPC3-205ENST00000467062 FCRLBQ6BAA4 426 aa16.8■□□□□ 0.28
SNAPC3-205ENST00000467062 VASNQ6EMK4 673 aa16.8■□□□□ 0.28
SNAPC3-205ENST00000467062 FAM109BQ6ICB4 259 aaPredicted RBP16.8■□□□□ 0.28
SNAPC3-205ENST00000467062 SLC25A25Q6KCM7 469 aa16.8■□□□□ 0.28
SNAPC3-205ENST00000467062 KCTD12Q96CX2 325 aaKnown RBP16.8■□□□□ 0.28
SNAPC3-205ENST00000467062 PTDSS2Q9BVG9 487 aa16.8■□□□□ 0.28
SNAPC3-205ENST00000467062 FGF20Q9NP95 211 aaPredicted RBP16.8■□□□□ 0.28
SNAPC3-205ENST00000467062 CTPS2Q9NRF8 586 aa16.8■□□□□ 0.28
SNAPC3-205ENST00000467062 TVP23BQ9NYZ1 205 aa16.8■□□□□ 0.28
SNAPC3-205ENST00000467062 CHST2Q9Y4C5 530 aa16.8■□□□□ 0.28
SNAPC3-205ENST00000467062 TMEM82A0PJX8 343 aa16.79■□□□□ 0.28
SNAPC3-205ENST00000467062 EIF4EP06730 217 aaKnown RBP16.79■□□□□ 0.28
SNAPC3-205ENST00000467062 ARAFP10398 606 aa16.79■□□□□ 0.28
SNAPC3-205ENST00000467062 S100PP25815 95 aa16.79■□□□□ 0.28
SNAPC3-205ENST00000467062 OPRD1P41143 372 aa16.79■□□□□ 0.28
SNAPC3-205ENST00000467062 MAPK9P45984 424 aa16.79■□□□□ 0.28
SNAPC3-205ENST00000467062 PCBP3P57721 371 aaKnown RBP16.79■□□□□ 0.28
SNAPC3-205ENST00000467062 RAB8AP61006 207 aa16.79■□□□□ 0.28
SNAPC3-205ENST00000467062 DPTQ07507 201 aa16.79■□□□□ 0.28
SNAPC3-205ENST00000467062 RAB40BQ12829 278 aa16.79■□□□□ 0.28
SNAPC3-205ENST00000467062 PAN3Q58A45 887 aaKnown RBP16.79■□□□□ 0.28
SNAPC3-205ENST00000467062 HBMQ6B0K9 141 aa16.79■□□□□ 0.28
SNAPC3-205ENST00000467062 TMUB2Q71RG4 321 aa16.79■□□□□ 0.28
SNAPC3-205ENST00000467062 SPICQ8N5J4 248 aa16.79■□□□□ 0.28
SNAPC3-205ENST00000467062 ZFP41Q8N8Y5 198 aa16.79■□□□□ 0.28
SNAPC3-205ENST00000467062 WFIKKN2Q8TEU8 576 aa16.79■□□□□ 0.28
SNAPC3-205ENST00000467062 FGF13Q92913 245 aa16.79■□□□□ 0.28
SNAPC3-205ENST00000467062 TMEM19Q96HH6 336 aa16.79■□□□□ 0.28
SNAPC3-205ENST00000467062 NARS2Q96I59 477 aaKnown RBP16.79■□□□□ 0.28
SNAPC3-205ENST00000467062 ABHD1Q96SE0 405 aa16.79■□□□□ 0.28
SNAPC3-205ENST00000467062 POLDIP3Q9BY77 421 aaKnown RBP16.79■□□□□ 0.28
SNAPC3-205ENST00000467062 BEX1Q9HBH7 125 aa16.79■□□□□ 0.28
SNAPC3-205ENST00000467062 LHX9Q9NQ69 397 aa16.79■□□□□ 0.28
SNAPC3-205ENST00000467062 PRSS16Q9NQE7 514 aa16.79■□□□□ 0.28
SNAPC3-205ENST00000467062 SPHK1Q9NYA1 384 aa16.79■□□□□ 0.28
SNAPC3-205ENST00000467062 MGAT4CQ9UBM8 478 aa16.79■□□□□ 0.28
SNAPC3-205ENST00000467062 GPR34Q9UPC5 381 aa16.79■□□□□ 0.28
SNAPC3-205ENST00000467062 C17orf113A0A1B0GUU1 675 aa16.79■□□□□ 0.28
SNAPC3-205ENST00000467062 SUSD5O60279 629 aa16.79■□□□□ 0.28
SNAPC3-205ENST00000467062 SIX6O95475 246 aa16.79■□□□□ 0.28
SNAPC3-205ENST00000467062 HNRNPA1P09651 372 aaKnown RBP eCLIP16.79■□□□□ 0.28
SNAPC3-205ENST00000467062 ACP5P13686 325 aa16.79■□□□□ 0.28
SNAPC3-205ENST00000467062 BSGP35613 385 aa16.79■□□□□ 0.28
SNAPC3-205ENST00000467062 ZNF750Q32MQ0 723 aa16.79■□□□□ 0.28
SNAPC3-205ENST00000467062 SYT14P1Q58G82 188 aa16.79■□□□□ 0.28
SNAPC3-205ENST00000467062 CRB2Q5IJ48 1285 aa16.79■□□□□ 0.28
SNAPC3-205ENST00000467062 METTL11BQ5VVY1 283 aa16.79■□□□□ 0.28
SNAPC3-205ENST00000467062 KRT78Q8N1N4 520 aa16.79■□□□□ 0.28
SNAPC3-205ENST00000467062 SAMD12Q8N8I0 201 aa16.79■□□□□ 0.28
SNAPC3-205ENST00000467062 LINC01555Q8NAE3 123 aa16.79■□□□□ 0.28
SNAPC3-205ENST00000467062 PXT1Q8NFP0 134 aa16.79■□□□□ 0.28
SNAPC3-205ENST00000467062 LINC00615Q96LM1 132 aaPredicted RBP16.79■□□□□ 0.28
SNAPC3-205ENST00000467062 CA5BQ9Y2D0 317 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms