RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 C5AR2Q9P296 337 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 CBLCQ9ULV8 474 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 PIP5K1CO60331 668 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 GMDSO60547 372 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 SCRG1O75711 98 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 CHATP28329 748 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 IL2RGP31785 369 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 PRSS3P35030 304 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 PTGER4P35408 488 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 SLC6A11P48066 632 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 ZXDBP98169 803 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 PNCKQ6P2M8 343 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 TMEM71Q6P5X7 295 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 SBSNQ6UWP8 590 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 WDR53Q7Z5U6 358 aaPredicted RBP8.18□□□□□ -1.1
HPS4-209ENST00000466781 GPR148Q8TDV2 347 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 CRYGNQ8WXF5 182 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 RSPRY1Q96DX4 576 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 RNF38Q9H0F5 515 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 TMEM59LQ9UK28 342 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 MED16Q9Y2X0 877 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 HSPE1-MOB4S4R3N1 261 aa8.18□□□□□ -1.1
HPS4-209ENST00000466781 NPIPA5A0A0B4J1W7 369 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 A0A1W2PPV4 95 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 OR52A4PA6NMU1 304 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 NPIPA7E9PJI5 369 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 YKT6O15498 198 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 NPIPA8P0DM63 369 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 SERPINA2P20848 420 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 LTC4SQ16873 150 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 IL20RBQ6UXL0 311 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 LRRC18Q8N456 261 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 ZNF417Q8TAU3 575 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 TMEM239Q8WW34 195 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 PSMF1Q92530 271 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 ZMYND19Q96E35 227 aaPredicted RBP8.17□□□□□ -1.1
HPS4-209ENST00000466781 ZNF578Q96N58 590 aaPredicted RBP8.17□□□□□ -1.1
HPS4-209ENST00000466781 PITHD1Q9GZP4 211 aaPredicted RBP8.17□□□□□ -1.1
HPS4-209ENST00000466781 TMEM45AQ9NWC5 275 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 CPNE7Q9UBL6 633 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 TESQ9UGI8 421 aaKnown RBP8.17□□□□□ -1.1
HPS4-209ENST00000466781 WIF1Q9Y5W5 379 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 DCDC2BA2VCK2 349 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 FUOMA2VDF0 154 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 BTBD17A6NE02 478 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 AP1G1O43747 822 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 OPN1LWP04000 364 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 CSF1P09603 554 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 AQP2P41181 271 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 KIR2DL3P43628 341 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 SSR4P51571 173 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 SF3A2Q15428 464 aaKnown RBP8.17□□□□□ -1.1
HPS4-209ENST00000466781 RGNQ15493 299 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 MICAQ29983 383 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 SFRP5Q5T4F7 317 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 FAM180BQ6P0A1 224 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 LIPIQ6XZB0 460 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 GOLM1Q8NBJ4 401 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 MDGA1Q8NFP4 955 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 DMBX1Q8NFW5 382 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 SLC7A13Q8TCU3 470 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 MAL2Q969L2 176 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 FOXRED1Q96CU9 486 aaPredicted RBP8.17□□□□□ -1.1
HPS4-209ENST00000466781 TCTN2Q96GX1 697 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 DPCDQ9BVM2 203 aaPredicted RBP8.17□□□□□ -1.1
HPS4-209ENST00000466781 SLC46A2Q9BY10 475 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 ULBP2Q9BZM5 246 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 SLC6A16Q9GZN6 736 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 EVA1AQ9H8M9 152 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 SPO11Q9Y5K1 396 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 UBR3Q6ZT12 1888 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 WNK3Q9BYP7 1800 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 F5H5P2 479 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 ZIC2O95409 532 aaPredicted RBP8.17□□□□□ -1.1
HPS4-209ENST00000466781 C7P10643 843 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 ARSBP15848 533 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 RPS5P46782 204 aaKnown RBP8.17□□□□□ -1.1
HPS4-209ENST00000466781 SLC10A1Q14973 349 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 OR8B8Q15620 311 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 PAN3Q58A45 887 aaKnown RBP8.17□□□□□ -1.1
HPS4-209ENST00000466781 OR52W1Q6IF63 320 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 KIAA1211LQ6NV74 962 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 DPY19L2P1Q6NXN4 242 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 GTPBP8Q8N3Z3 284 aaPredicted RBP8.17□□□□□ -1.1
HPS4-209ENST00000466781 ZADH2Q8N4Q0 377 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 STEAP2Q8NFT2 490 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 OR4K5Q8NGD3 323 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 MOCOSQ96EN8 888 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 CHFRQ96EP1 664 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 ABCG5Q9H222 651 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 GNB4Q9HAV0 340 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 GPR83Q9NYM4 423 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 STEAP1Q9UHE8 339 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 NOSIPQ9Y314 301 aaKnown RBP8.17□□□□□ -1.1
HPS4-209ENST00000466781 ZNF337Q9Y3M9 751 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 ECM29Q5VYK3 1845 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 CENPBD1B2RD01 187 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 IL1AP01583 271 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 TCN2P20062 427 aa8.17□□□□□ -1.1
HPS4-209ENST00000466781 IL3RAP26951 378 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms