RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 TMEM88BA6NKF7 163 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 SNRPGP15A8MWD9 76 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 PRR23D1E9PI22 279 aaPredicted RBP6.77□□□□□ -1.33
USP48-206ENST00000464577 NEDD8-MDP1E9PL57 170 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 OGG1O15527 345 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 OR1F1O43749 312 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 GATBO75879 557 aaKnown RBP6.77□□□□□ -1.33
USP48-206ENST00000464577 TOXO94900 526 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 ATP1B1P05026 303 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 ALDOBP05062 364 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 FGF2P09038 288 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 UCHL1P09936 223 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 SBK2P0C263 348 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 PRR23D2P0DMB1 279 aaPredicted RBP6.77□□□□□ -1.33
USP48-206ENST00000464577 ICAM2P13598 275 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 NT5EP21589 574 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 DRD5P21918 477 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 SLC2A5P22732 501 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 GPR1P46091 355 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 TPMTP51580 245 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 FXYD6P3P58550 94 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 PRKCZQ05513 592 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 DPTQ07507 201 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 DBPQ10586 325 aaPredicted RBP6.77□□□□□ -1.33
USP48-206ENST00000464577 POU4F2Q12837 409 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 BTN1A1Q13410 526 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 CAMK1Q14012 370 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 SLC9A5Q14940 896 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 ZIC1Q15915 447 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 TUSC1Q2TAM9 212 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 MRM1Q6IN84 353 aaKnown RBP6.77□□□□□ -1.33
USP48-206ENST00000464577 HEPHL1Q6MZM0 1159 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 ZNF793Q6ZN11 406 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 KANSL1Q7Z3B3 1105 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 C11orf96Q7Z7L8 435 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 RNF113BQ8IZP6 322 aaKnown RBP6.77□□□□□ -1.33
USP48-206ENST00000464577 C2orf73Q8N5S3 287 aaPredicted RBP6.77□□□□□ -1.33
USP48-206ENST00000464577 EIF4E3Q8N5X7 224 aaKnown RBP6.77□□□□□ -1.33
USP48-206ENST00000464577 TTLQ8NG68 377 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 OR4D9Q8NGE8 314 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 OR5K2Q8NHB8 316 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 MOSPD2Q8NHP6 518 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 PHYHIPQ92561 330 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 NUS1Q96E22 293 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 ELP4Q96EB1 424 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 SGTBQ96EQ0 304 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 CNRIP1Q96F85 164 aaPredicted RBP6.77□□□□□ -1.33
USP48-206ENST00000464577 HS6ST2Q96MM7 605 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 PELOQ9BRX2 385 aaKnown RBP6.77□□□□□ -1.33
USP48-206ENST00000464577 AICDAQ9GZX7 198 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 CDCP1Q9H5V8 836 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 AUNIPQ9H7T9 357 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 MED20Q9H944 212 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 ADGRL4Q9HBW9 690 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 BRD7Q9NPI1 651 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 OR6C2Q9NZP2 312 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 SLC7A7Q9UM01 511 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 ZNF443Q9Y2A4 671 aaPredicted RBP6.77□□□□□ -1.33
USP48-206ENST00000464577 NTNG1Q9Y2I2 539 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 MRPS7Q9Y2R9 242 aaKnown RBP6.77□□□□□ -1.33
USP48-206ENST00000464577 CASP8AP2Q9UKL3 1982 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 A0A1W2PPV9 198 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 A0A1W2PQ45 241 aaPredicted RBP6.77□□□□□ -1.33
USP48-206ENST00000464577 A0A1W2PQY0 241 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 LRIT2A6NDA9 550 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 HMSDA8MTL9 139 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 MCRIP1C9JLW8 97 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 GABARAPH6UMI1 98 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 H7BY64 318 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 J3QLW9 94 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 SPINT1O43278 529 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 SULT1B1O43704 296 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 GMDSO60547 372 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 GALR3O60755 368 aaPredicted RBP6.77□□□□□ -1.33
USP48-206ENST00000464577 REM1O75628 298 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 RCBTB2O95199 551 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 ZIC2O95409 532 aaPredicted RBP6.77□□□□□ -1.33
USP48-206ENST00000464577 ZNF19P17023 458 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 CSNK2A2P19784 350 aaPredicted RBP6.77□□□□□ -1.33
USP48-206ENST00000464577 NFYAP23511 347 aaPredicted RBP6.77□□□□□ -1.33
USP48-206ENST00000464577 VEGFCP49767 419 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 CSNK1G2P78368 415 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 MRPS10P82664 201 aaKnown RBP6.77□□□□□ -1.33
USP48-206ENST00000464577 DUSP2Q05923 314 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 GAS6Q14393 721 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 KRT33BQ14525 404 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 CEBPEQ15744 281 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 EIPR1Q53HC9 387 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 TMEM215Q68D42 235 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 ZNF626Q68DY1 528 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 SDR16C5Q8N3Y7 309 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 HDDC3Q8N4P3 179 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 NUP43Q8NFH3 380 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 LGALS14Q8TCE9 139 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 ZFPM2Q8WW38 1151 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 TFGQ92734 400 aaPredicted RBP6.77□□□□□ -1.33
USP48-206ENST00000464577 GHSRQ92847 366 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 RIT1Q92963 219 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 ZG16BQ96DA0 208 aa6.77□□□□□ -1.33
USP48-206ENST00000464577 PRAP1Q96NZ9 151 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms