RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 ACP2P11117 423 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 CPEP16870 476 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 RPS4Y1P22090 263 aaKnown RBP9.16□□□□□ -0.94
PTPRD-207ENST00000463477 PSMA1P25786 263 aaKnown RBP9.16□□□□□ -0.94
PTPRD-207ENST00000463477 OMPP47874 163 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 GABRA4P48169 554 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 PSMD7P51665 324 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 RPS3AP61247 264 aaKnown RBP9.16□□□□□ -0.94
PTPRD-207ENST00000463477 DUSP8Q13202 625 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 KRR1Q13601 381 aaKnown RBP9.16□□□□□ -0.94
PTPRD-207ENST00000463477 MINDY4Q4G0A6 757 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 FHL5Q5TD97 284 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 FCRL6Q6DN72 434 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 ACSM5Q6NUN0 579 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 C6orf15Q6UXA7 325 aaPredicted RBP9.16□□□□□ -0.94
PTPRD-207ENST00000463477 RNF44Q7L0R7 432 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 CCDC190Q86UF4 302 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 TRIM73Q86UV7 250 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 KIF18BQ86Y91 864 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 LYSMD2Q8IV50 215 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 CYP4Z2PQ8N1L4 340 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 ZNF655Q8N720 491 aaPredicted RBP9.16□□□□□ -0.94
PTPRD-207ENST00000463477 OR7G2Q8NG99 324 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 OR52I1Q8NGK6 324 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 OSTF1Q92882 214 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 LRFN5Q96NI6 719 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 GPA33Q99795 319 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 NEURL2Q9BR09 285 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 KLHL25Q9H0H3 589 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 CACYBPQ9HB71 228 aaKnown RBP9.16□□□□□ -0.94
PTPRD-207ENST00000463477 TAS2R16Q9NYV7 291 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 PADI1Q9ULC6 663 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 STUB1Q9UNE7 303 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 ZNF232Q9UNY5 417 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 C19orf53Q9UNZ5 99 aaPredicted RBP9.16□□□□□ -0.94
PTPRD-207ENST00000463477 LHX6Q9UPM6 363 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 TRAPPC4Q9Y296 219 aa9.16□□□□□ -0.94
PTPRD-207ENST00000463477 ZNF443Q9Y2A4 671 aaPredicted RBP9.16□□□□□ -0.94
PTPRD-207ENST00000463477 HYKKA2RU49 373 aa9.15□□□□□ -0.94
PTPRD-207ENST00000463477 ZNF670-ZNF695F2Z2N8 137 aa9.15□□□□□ -0.94
PTPRD-207ENST00000463477 LOC110117498-PIK3R3F6TDL0 507 aa9.15□□□□□ -0.94
PTPRD-207ENST00000463477 H3BMH7 237 aa9.15□□□□□ -0.94
PTPRD-207ENST00000463477 MYL12BO14950 172 aa9.15□□□□□ -0.94
PTPRD-207ENST00000463477 P2RX6O15547 441 aa9.15□□□□□ -0.94
PTPRD-207ENST00000463477 PLOD3O60568 738 aa9.15□□□□□ -0.94
PTPRD-207ENST00000463477 TPST2O60704 377 aa9.15□□□□□ -0.94
PTPRD-207ENST00000463477 CTSVO60911 334 aa9.15□□□□□ -0.94
PTPRD-207ENST00000463477 ZIC2O95409 532 aaPredicted RBP9.15□□□□□ -0.94
PTPRD-207ENST00000463477 PTTG1O95997 202 aa9.15□□□□□ -0.94
PTPRD-207ENST00000463477 ATP1B1P05026 303 aa9.15□□□□□ -0.94
PTPRD-207ENST00000463477 HBQ1P09105 142 aa9.15□□□□□ -0.94
PTPRD-207ENST00000463477 CCNYL3P0C7X3 344 aa9.15□□□□□ -0.94
PTPRD-207ENST00000463477 CPMP14384 443 aa9.15□□□□□ -0.94
PTPRD-207ENST00000463477 ALOX12P18054 663 aa9.15□□□□□ -0.94
PTPRD-207ENST00000463477 MAGP20916 626 aa9.15□□□□□ -0.94
PTPRD-207ENST00000463477 CRYBB2P43320 205 aa9.15□□□□□ -0.94
PTPRD-207ENST00000463477 RGS8P57771 180 aaPredicted RBP9.15□□□□□ -0.94
PTPRD-207ENST00000463477 RUNX2Q13950 521 aa9.15□□□□□ -0.94
PTPRD-207ENST00000463477 LARS2Q15031 903 aaKnown RBP9.15□□□□□ -0.94
PTPRD-207ENST00000463477 SNAPC1Q16533 368 aa9.15□□□□□ -0.94
PTPRD-207ENST00000463477 ZNF628Q5EBL2 1059 aa9.15□□□□□ -0.94
PTPRD-207ENST00000463477 TYW3Q6IPR3 259 aaKnown RBP9.15□□□□□ -0.94
PTPRD-207ENST00000463477 FAM111BQ6SJ93 734 aa9.15□□□□□ -0.94
PTPRD-207ENST00000463477 ZNF517Q6ZMY9 492 aaPredicted RBP9.15□□□□□ -0.94
PTPRD-207ENST00000463477 VRK2Q86Y07 508 aa9.15□□□□□ -0.94
PTPRD-207ENST00000463477 PEX5LQ8IYB4 626 aa9.15□□□□□ -0.94
PTPRD-207ENST00000463477 SLC34A3Q8N130 599 aa9.15□□□□□ -0.94
PTPRD-207ENST00000463477 OR1L3Q8NH93 324 aa9.15□□□□□ -0.94
PTPRD-207ENST00000463477 PIK3R3Q92569 461 aa9.15□□□□□ -0.94
PTPRD-207ENST00000463477 KAT2AQ92830 837 aa9.15□□□□□ -0.94
PTPRD-207ENST00000463477 OTUB1Q96FW1 271 aaPredicted RBP9.15□□□□□ -0.94
PTPRD-207ENST00000463477 LRR1Q96L50 414 aa9.15□□□□□ -0.94
PTPRD-207ENST00000463477 SLC38A2Q96QD8 506 aa9.15□□□□□ -0.94
PTPRD-207ENST00000463477 STACQ99469 402 aa9.15□□□□□ -0.94
PTPRD-207ENST00000463477 ZFYVE21Q9BQ24 234 aa9.15□□□□□ -0.94
PTPRD-207ENST00000463477 JAM3Q9BX67 310 aa9.15□□□□□ -0.94
PTPRD-207ENST00000463477 TEX12Q9BXU0 123 aa9.15□□□□□ -0.94
PTPRD-207ENST00000463477 C6orf62Q9GZU0 229 aaPredicted RBP9.15□□□□□ -0.94
PTPRD-207ENST00000463477 PIGUQ9H490 435 aa9.15□□□□□ -0.94
PTPRD-207ENST00000463477 KRCC1Q9NPI7 259 aaPredicted RBP9.15□□□□□ -0.94
PTPRD-207ENST00000463477 POLE3Q9NRF9 147 aa9.15□□□□□ -0.94
PTPRD-207ENST00000463477 ENAMQ9NRM1 1142 aa9.15□□□□□ -0.94
PTPRD-207ENST00000463477 DUSP22Q9NRW4 184 aa9.15□□□□□ -0.94
PTPRD-207ENST00000463477 IL20Q9NYY1 176 aa9.15□□□□□ -0.94
PTPRD-207ENST00000463477 PLCL2Q9UPR0 1127 aa9.15□□□□□ -0.94
PTPRD-207ENST00000463477 EXOSC1Q9Y3B2 195 aaKnown RBP9.15□□□□□ -0.94
PTPRD-207ENST00000463477 SPACA6W5XKT8 324 aa9.15□□□□□ -0.94
PTPRD-207ENST00000463477 NBEAQ8NFP9 2946 aa9.14□□□□□ -0.95
PTPRD-207ENST00000463477 LOC101059948A0A1B0GTJ6 334 aa9.14□□□□□ -0.95
PTPRD-207ENST00000463477 TEX51A0A1B0GUA7 166 aa9.14□□□□□ -0.95
PTPRD-207ENST00000463477 SLC35F4A4IF30 521 aa9.14□□□□□ -0.95
PTPRD-207ENST00000463477 TMEM150CB9EJG8 249 aa9.14□□□□□ -0.95
PTPRD-207ENST00000463477 FMO6PO60774 539 aa9.14□□□□□ -0.95
PTPRD-207ENST00000463477 CPNE3O75131 537 aaKnown RBP9.14□□□□□ -0.95
PTPRD-207ENST00000463477 SCRG1O75711 98 aa9.14□□□□□ -0.95
PTPRD-207ENST00000463477 MAP3K8P41279 467 aa9.14□□□□□ -0.95
PTPRD-207ENST00000463477 EEF1A1P68104 462 aaKnown RBP9.14□□□□□ -0.95
PTPRD-207ENST00000463477 CXADRP78310 365 aa9.14□□□□□ -0.95
PTPRD-207ENST00000463477 TPBGQ13641 420 aa9.14□□□□□ -0.95
PTPRD-207ENST00000463477 DOC2BQ14184 412 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms