RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 DBX2Q6ZNG2 339 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 HSD17B13Q7Z5P4 300 aaPredicted RBP8.1□□□□□ -1.11
SHQ1-203ENST00000463369 SYT12Q8IV01 421 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 EIF4E3Q8N5X7 224 aaKnown RBP8.1□□□□□ -1.11
SHQ1-203ENST00000463369 MAFAQ8NHW3 353 aaPredicted RBP8.1□□□□□ -1.11
SHQ1-203ENST00000463369 GEMIN6Q8WXD5 167 aaKnown RBP8.1□□□□□ -1.11
SHQ1-203ENST00000463369 ADAMTS14Q8WXS8 1223 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 ACOT12Q8WYK0 555 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 MGME1Q9BQP7 344 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 SEC22CQ9BRL7 303 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 CINPQ9BW66 212 aaPredicted RBP8.1□□□□□ -1.11
SHQ1-203ENST00000463369 CYSLTR2Q9NS75 346 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 IMP3Q9NV31 184 aaKnown RBP8.1□□□□□ -1.11
SHQ1-203ENST00000463369 SOHLH2Q9NX45 425 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 ZSCAN32Q9NX65 697 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 SLC25A13Q9UJS0 675 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 ENPP4Q9Y6X5 453 aa8.1□□□□□ -1.11
SHQ1-203ENST00000463369 TMEM129A0AVI4 362 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 SHISA3A0PJX4 238 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 SMAD6O43541 496 aaKnown RBP8.09□□□□□ -1.11
SHQ1-203ENST00000463369 SIGLEC6O43699 453 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 STK16O75716 305 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 TOXO94900 526 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 APOL3O95236 402 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 ADAP00813 363 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 ITGA5P08648 1049 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 UGT2B7P16662 529 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 EPORP19235 508 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 CR2P20023 1033 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 CALCRP30988 508 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 ECI1P42126 302 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 HAAOP46952 286 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 RFX3P48380 749 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 CARD18P57730 90 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 ZP1P60852 638 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 GMFBP60983 142 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 TFF2Q03403 129 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 CHIT1Q13231 466 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 BOP1Q14137 746 aaKnown RBP8.09□□□□□ -1.11
SHQ1-203ENST00000463369 SLC36A2Q495M3 483 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 CT83Q5H943 113 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 TCTE1Q5JU00 501 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 CDKL4Q5MAI5 379 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 FAM198BQ6UWH4 519 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 STK40Q8N2I9 435 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 ARIH2OSQ8N7S6 290 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 HUS1BQ8NHY5 278 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 ZNF671Q8TAW3 534 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 MR1Q95460 341 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 PLPPR2Q96GM1 343 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 FCRL1Q96LA6 429 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 SMIM14Q96QK8 99 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 EBPLQ9BY08 206 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 SLC19A3Q9BZV2 496 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 RNF32Q9H0A6 362 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 SEPSECSQ9HD40 501 aaKnown RBP8.09□□□□□ -1.11
SHQ1-203ENST00000463369 COPZ2Q9P299 210 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 LHX3Q9UBR4 397 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 BTNL2Q9UIR0 455 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 ING1Q9UK53 422 aaPredicted RBP8.09□□□□□ -1.11
SHQ1-203ENST00000463369 HSF4Q9ULV5 492 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 SPATA2Q9UM82 520 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 KCNK7Q9Y2U2 307 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 KCNE1BA0A087WTH5 132 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 K7ERQ8 282 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 SSNA1O43805 119 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 ZNF821O75541 412 aaPredicted RBP8.09□□□□□ -1.11
SHQ1-203ENST00000463369 SNAPC5O75971 98 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 RGS11O94810 467 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 OR5F1O95221 314 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 SOX14O95416 240 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 SRPRAP08240 638 aaKnown RBP8.09□□□□□ -1.11
SHQ1-203ENST00000463369 H2AFB1P0C5Y9 115 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 H2AFB2P0C5Z0 115 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 IL9P15248 144 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 CHI3L1P36222 383 aaPredicted RBP8.09□□□□□ -1.11
SHQ1-203ENST00000463369 SRP9P49458 86 aaKnown RBP8.09□□□□□ -1.11
SHQ1-203ENST00000463369 RGS4P49798 205 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 SELENOPP49908 381 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 XKP51811 444 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 BLVRAP53004 296 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 GAS1P54826 345 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 SUMO3P55854 103 aaPredicted RBP8.09□□□□□ -1.11
SHQ1-203ENST00000463369 TSPAN5P62079 268 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 DHODHQ02127 395 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 MESP2Q0VG99 397 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 TRA2AQ13595 282 aaKnown RBP eCLIP8.09□□□□□ -1.11
SHQ1-203ENST00000463369 SLC25A30Q5SVS4 291 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 LRRC28Q86X40 367 aaPredicted RBP8.09□□□□□ -1.11
SHQ1-203ENST00000463369 ZNF321PQ8N8H1 164 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 ZNF610Q8N9Z0 462 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 OR5M3Q8NGP4 307 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 NEIL3Q8TAT5 605 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 GANCQ8TET4 914 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 SPACA9Q96E40 222 aaPredicted RBP8.09□□□□□ -1.11
SHQ1-203ENST00000463369 HIST1H2AHQ96KK5 128 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 OR4K3Q96R72 315 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 DUSP26Q9BV47 211 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 CIPCQ9C0C6 399 aa8.09□□□□□ -1.11
SHQ1-203ENST00000463369 METTL17Q9H7H0 456 aaPredicted RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms