RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 ANKK1Q8NFD2 765 aa13.02□□□□□ -0.33
ERCC3-205ENST00000460485 FNDC8Q8TC99 324 aa13.02□□□□□ -0.33
ERCC3-205ENST00000460485 TMEM255BQ8WV15 326 aa13.02□□□□□ -0.33
ERCC3-205ENST00000460485 ELF4Q99607 663 aaPredicted RBP13.02□□□□□ -0.33
ERCC3-205ENST00000460485 GPA33Q99795 319 aa13.02□□□□□ -0.33
ERCC3-205ENST00000460485 NDEL1Q9GZM8 345 aa13.02□□□□□ -0.33
ERCC3-205ENST00000460485 NXF2Q9GZY0 626 aaKnown RBP13.02□□□□□ -0.33
ERCC3-205ENST00000460485 ZNF768Q9H5H4 540 aaKnown RBP13.02□□□□□ -0.33
ERCC3-205ENST00000460485 EGLN3Q9H6Z9 239 aa13.02□□□□□ -0.33
ERCC3-205ENST00000460485 MKKSQ9NPJ1 570 aaPredicted RBP13.02□□□□□ -0.33
ERCC3-205ENST00000460485 AKIP1Q9NQ31 210 aa13.02□□□□□ -0.33
ERCC3-205ENST00000460485 CTPS2Q9NRF8 586 aa13.02□□□□□ -0.33
ERCC3-205ENST00000460485 LANCL2Q9NS86 450 aa13.02□□□□□ -0.33
ERCC3-205ENST00000460485 TBCCD1Q9NVR7 557 aa13.02□□□□□ -0.33
ERCC3-205ENST00000460485 SIDT1Q9NXL6 827 aaKnown RBP13.02□□□□□ -0.33
ERCC3-205ENST00000460485 DNAJB12Q9NXW2 375 aaKnown RBP13.02□□□□□ -0.33
ERCC3-205ENST00000460485 CNIH4Q9P003 139 aa13.02□□□□□ -0.33
ERCC3-205ENST00000460485 H2AFY2Q9P0M6 372 aaPredicted RBP13.02□□□□□ -0.33
ERCC3-205ENST00000460485 OR10H1Q9Y4A9 318 aa13.02□□□□□ -0.33
ERCC3-205ENST00000460485 CLDN16Q9Y5I7 305 aa13.02□□□□□ -0.33
ERCC3-205ENST00000460485 GON4LQ3T8J9 2241 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 IGKV3D-11A0A0A0MRZ8 115 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 PNMA8CA0A1B0GUJ8 204 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 A0A1B0GX78 115 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 GXYLT2A0PJZ3 443 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 FRG2CA6NGY1 282 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 H3BMH7 237 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 M0R129 80 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 LYPD3O95274 346 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 IFNA16P05015 189 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 GAAP10253 952 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 BCKDHBP21953 392 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 FBLP22087 321 aaKnown RBP13.01□□□□□ -0.33
ERCC3-205ENST00000460485 GADD45AP24522 165 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 MAOBP27338 520 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 HTR2AP28223 471 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 CD40LGP29965 261 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 HOXD12P35452 270 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 BMXP51813 675 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 CDH11P55287 796 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 BDH1Q02338 343 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 ACSM1Q08AH1 577 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 SYT16Q17RD7 645 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 ZNF404Q494X3 552 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 PDZK1Q5T2W1 519 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 ARHGAP11AQ6P4F7 1023 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 NUP54Q7Z3B4 507 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 ARHGAP22Q7Z5H3 698 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 SLC35F3Q8IY50 421 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 SLC34A3Q8N130 599 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 LNX2Q8N448 690 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 DEFB119Q8N690 84 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 IQCF1Q8N6M8 205 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 ZNF615Q8N8J6 731 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 GALNT6Q8NCL4 622 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 C17orf47Q8NEP4 570 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 OR52I1Q8NGK6 324 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 OR8D4Q8NGM9 314 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 OR6Q1Q8NGQ2 317 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 C16orf52Q8NHV5 167 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 NDNFQ8TB73 568 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 DAZLQ92904 295 aaKnown RBP13.01□□□□□ -0.33
ERCC3-205ENST00000460485 RNFT2Q96EX2 444 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 SH3YL1Q96HL8 342 aaPredicted RBP13.01□□□□□ -0.33
ERCC3-205ENST00000460485 CNPPD1Q9BV87 410 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 PLA2G12AQ9BZM1 189 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 OR52D1Q9H346 318 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 C12orf10Q9HB07 376 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 KCNE5Q9UJ90 142 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 STUB1Q9UNE7 303 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 ERVK-19Q9WJR5 959 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 EXOGQ9Y2C4 368 aaKnown RBP13.01□□□□□ -0.33
ERCC3-205ENST00000460485 PEX16Q9Y5Y5 336 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 KNL1Q8NG31 2342 aa13.01□□□□□ -0.33
ERCC3-205ENST00000460485 PCDH15Q96QU1 1955 aa13□□□□□ -0.33
ERCC3-205ENST00000460485 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13□□□□□ -0.33
ERCC3-205ENST00000460485 C2orf92A0A1B0GVN3 265 aa13□□□□□ -0.33
ERCC3-205ENST00000460485 SERINC4A6NH21 518 aa13□□□□□ -0.33
ERCC3-205ENST00000460485 TGFBR3LH3BV60 316 aa13□□□□□ -0.33
ERCC3-205ENST00000460485 CSO75390 466 aaKnown RBP13□□□□□ -0.33
ERCC3-205ENST00000460485 IFNGP01579 166 aa13□□□□□ -0.33
ERCC3-205ENST00000460485 THY1P04216 161 aa13□□□□□ -0.33
ERCC3-205ENST00000460485 NGFRP08138 427 aa13□□□□□ -0.33
ERCC3-205ENST00000460485 CT45A8P0DMV1 189 aa13□□□□□ -0.33
ERCC3-205ENST00000460485 CT45A9P0DMV2 189 aa13□□□□□ -0.33
ERCC3-205ENST00000460485 IFI30P13284 250 aa13□□□□□ -0.33
ERCC3-205ENST00000460485 GALP22466 123 aa13□□□□□ -0.33
ERCC3-205ENST00000460485 EPHA8P29322 1005 aaPredicted RBP13□□□□□ -0.33
ERCC3-205ENST00000460485 SLC6A6P31641 620 aa13□□□□□ -0.33
ERCC3-205ENST00000460485 S100A5P33763 92 aa13□□□□□ -0.33
ERCC3-205ENST00000460485 GPR4P46093 362 aa13□□□□□ -0.33
ERCC3-205ENST00000460485 NCS1P62166 190 aa13□□□□□ -0.33
ERCC3-205ENST00000460485 ACY1Q03154 408 aa13□□□□□ -0.33
ERCC3-205ENST00000460485 POU4F2Q12837 409 aa13□□□□□ -0.33
ERCC3-205ENST00000460485 TSTQ16762 297 aaKnown RBP13□□□□□ -0.33
ERCC3-205ENST00000460485 COL28A1Q2UY09 1125 aa13□□□□□ -0.33
ERCC3-205ENST00000460485 CT45A2Q5DJT8 189 aa13□□□□□ -0.33
ERCC3-205ENST00000460485 AADACL4Q5VUY2 407 aa13□□□□□ -0.33
ERCC3-205ENST00000460485 SMARCD3Q6STE5 483 aa13□□□□□ -0.33
ERCC3-205ENST00000460485 HMGN2P46Q86SG4 172 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms