RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 C12orf65Q9H3J6 166 aaKnown RBP19.12■□□□□ 0.65
CPNE1-220ENST00000458038 TRAF6Q9Y4K3 522 aa19.12■□□□□ 0.65
CPNE1-220ENST00000458038 NPIPB9F8W1W9 429 aa19.11■□□□□ 0.65
CPNE1-220ENST00000458038 ETV2O00321 342 aaPredicted RBP19.11■□□□□ 0.65
CPNE1-220ENST00000458038 NPHS1O60500 1241 aa19.11■□□□□ 0.65
CPNE1-220ENST00000458038 SOD3P08294 240 aa19.11■□□□□ 0.65
CPNE1-220ENST00000458038 PRKCAP17252 672 aa19.11■□□□□ 0.65
CPNE1-220ENST00000458038 EFNA1P20827 205 aaPredicted RBP19.11■□□□□ 0.65
CPNE1-220ENST00000458038 TP53BP2Q13625 1128 aa19.11■□□□□ 0.65
CPNE1-220ENST00000458038 UGT3A2Q3SY77 523 aa19.11■□□□□ 0.65
CPNE1-220ENST00000458038 BHLHA15Q7RTS1 189 aaPredicted RBP19.11■□□□□ 0.65
CPNE1-220ENST00000458038 P2RY8Q86VZ1 359 aa19.11■□□□□ 0.65
CPNE1-220ENST00000458038 OR7A2PQ8NGA2 310 aa19.11■□□□□ 0.65
CPNE1-220ENST00000458038 OR5W2Q8NH69 310 aa19.11■□□□□ 0.65
CPNE1-220ENST00000458038 COQ10BQ9H8M1 238 aa19.11■□□□□ 0.65
CPNE1-220ENST00000458038 BARX1Q9HBU1 254 aaPredicted RBP19.11■□□□□ 0.65
CPNE1-220ENST00000458038 FAIMQ9NVQ4 179 aa19.11■□□□□ 0.65
CPNE1-220ENST00000458038 ADAM21Q9UKJ8 722 aa19.11■□□□□ 0.65
CPNE1-220ENST00000458038 RNF223E7ERA6 249 aa19.1■□□□□ 0.65
CPNE1-220ENST00000458038 SHBGP04278 402 aa19.1■□□□□ 0.65
CPNE1-220ENST00000458038 LAMP1P11279 417 aa19.1■□□□□ 0.65
CPNE1-220ENST00000458038 OR3A2P47893 321 aa19.1■□□□□ 0.65
CPNE1-220ENST00000458038 KRTAP1-1Q07627 177 aa19.1■□□□□ 0.65
CPNE1-220ENST00000458038 CBFBQ13951 182 aa19.1■□□□□ 0.65
CPNE1-220ENST00000458038 SPDYE7PQ495Y7 208 aa19.1■□□□□ 0.65
CPNE1-220ENST00000458038 UBLCP1Q8WVY7 318 aaPredicted RBP19.1■□□□□ 0.65
CPNE1-220ENST00000458038 COQ8BQ96D53 544 aa19.1■□□□□ 0.65
CPNE1-220ENST00000458038 MUCL1Q96DR8 90 aa19.1■□□□□ 0.65
CPNE1-220ENST00000458038 GPATCH2Q9NW75 528 aa19.1■□□□□ 0.65
CPNE1-220ENST00000458038 LIPT1Q9Y234 373 aa19.1■□□□□ 0.65
CPNE1-220ENST00000458038 ALPK2Q86TB3 2170 aa19.1■□□□□ 0.65
CPNE1-220ENST00000458038 CR1P17927 2039 aa19.1■□□□□ 0.65
CPNE1-220ENST00000458038 ZNF724A8MTY0 619 aa19.09■□□□□ 0.65
CPNE1-220ENST00000458038 ZNF814B7Z6K7 855 aa19.09■□□□□ 0.65
CPNE1-220ENST00000458038 PIP5K1BO14986 540 aa19.09■□□□□ 0.65
CPNE1-220ENST00000458038 ZNF264O43296 627 aa19.09■□□□□ 0.65
CPNE1-220ENST00000458038 TLX2O43763 284 aaPredicted RBP19.09■□□□□ 0.65
CPNE1-220ENST00000458038 THBS1P07996 1170 aa19.09■□□□□ 0.65
CPNE1-220ENST00000458038 PRPS1L1P21108 318 aa19.09■□□□□ 0.65
CPNE1-220ENST00000458038 ENPP1P22413 925 aa19.09■□□□□ 0.65
CPNE1-220ENST00000458038 BSPH1Q075Z2 132 aa19.09■□□□□ 0.65
CPNE1-220ENST00000458038 RASGEF1BQ0VAM2 473 aa19.09■□□□□ 0.65
CPNE1-220ENST00000458038 TSC22D1Q15714 1073 aa19.09■□□□□ 0.65
CPNE1-220ENST00000458038 TOMM34Q15785 309 aaPredicted RBP19.09■□□□□ 0.65
CPNE1-220ENST00000458038 ATP6AP1LQ52LC2 224 aa19.09■□□□□ 0.65
CPNE1-220ENST00000458038 ATP6V1C2Q8NEY4 427 aa19.09■□□□□ 0.65
CPNE1-220ENST00000458038 PSD2Q9BQI7 771 aa19.09■□□□□ 0.65
CPNE1-220ENST00000458038 TRIM2Q9C040 744 aa19.09■□□□□ 0.65
CPNE1-220ENST00000458038 NMUR2Q9GZQ4 415 aa19.09■□□□□ 0.65
CPNE1-220ENST00000458038 SLCO5A1Q9H2Y9 848 aa19.09■□□□□ 0.65
CPNE1-220ENST00000458038 ALG2Q9H553 416 aa19.09■□□□□ 0.65
CPNE1-220ENST00000458038 SERINC1Q9NRX5 453 aa19.09■□□□□ 0.65
CPNE1-220ENST00000458038 MKS1Q9NXB0 559 aa19.09■□□□□ 0.65
CPNE1-220ENST00000458038 DUXAA6NLW8 204 aa19.08■□□□□ 0.64
CPNE1-220ENST00000458038 OIP5O43482 229 aa19.08■□□□□ 0.64
CPNE1-220ENST00000458038 CYTIPO60759 359 aa19.08■□□□□ 0.64
CPNE1-220ENST00000458038 AK1P00568 194 aa19.08■□□□□ 0.64
CPNE1-220ENST00000458038 UBL4AP11441 157 aa19.08■□□□□ 0.64
CPNE1-220ENST00000458038 PPA1Q15181 289 aa19.08■□□□□ 0.64
CPNE1-220ENST00000458038 ARL13AQ5H913 290 aaPredicted RBP19.08■□□□□ 0.64
CPNE1-220ENST00000458038 TIMM23BQ5SRD1 257 aa19.08■□□□□ 0.64
CPNE1-220ENST00000458038 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.08■□□□□ 0.64
CPNE1-220ENST00000458038 C3orf33Q6P1S2 294 aa19.08■□□□□ 0.64
CPNE1-220ENST00000458038 C4orf33Q8N1A6 199 aa19.08■□□□□ 0.64
CPNE1-220ENST00000458038 ZNF614Q8N883 585 aa19.08■□□□□ 0.64
CPNE1-220ENST00000458038 ST8SIA1Q92185 356 aa19.08■□□□□ 0.64
CPNE1-220ENST00000458038 RADILQ96JH8 1075 aa19.08■□□□□ 0.64
CPNE1-220ENST00000458038 BHLHE41Q9C0J9 482 aaPredicted RBP19.08■□□□□ 0.64
CPNE1-220ENST00000458038 CXorf36Q9H7Y0 433 aa19.08■□□□□ 0.64
CPNE1-220ENST00000458038 MAGED1Q9Y5V3 778 aaPredicted RBP19.08■□□□□ 0.64
CPNE1-220ENST00000458038 DPRXA6NFQ7 191 aa19.07■□□□□ 0.64
CPNE1-220ENST00000458038 SMIM23A6NLE4 172 aa19.07■□□□□ 0.64
CPNE1-220ENST00000458038 DNAJA2O60884 412 aa19.07■□□□□ 0.64
CPNE1-220ENST00000458038 PEX11AO75192 247 aa19.07■□□□□ 0.64
CPNE1-220ENST00000458038 SERPINB5P36952 375 aa19.07■□□□□ 0.64
CPNE1-220ENST00000458038 QPRTQ15274 297 aa19.07■□□□□ 0.64
CPNE1-220ENST00000458038 NRF1Q16656 503 aa19.07■□□□□ 0.64
CPNE1-220ENST00000458038 PGGHGQ32M88 737 aa19.07■□□□□ 0.64
CPNE1-220ENST00000458038 XKR7Q5GH72 579 aa19.07■□□□□ 0.64
CPNE1-220ENST00000458038 SEZ6L2Q6UXD5 910 aa19.07■□□□□ 0.64
CPNE1-220ENST00000458038 DTX2Q86UW9 622 aa19.07■□□□□ 0.64
CPNE1-220ENST00000458038 ZNF619Q8N2I2 560 aa19.07■□□□□ 0.64
CPNE1-220ENST00000458038 TMCO5AQ8N6Q1 288 aa19.07■□□□□ 0.64
CPNE1-220ENST00000458038 OIT3Q8WWZ8 545 aa19.07■□□□□ 0.64
CPNE1-220ENST00000458038 TMEM234Q8WY98 164 aa19.07■□□□□ 0.64
CPNE1-220ENST00000458038 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.07■□□□□ 0.643e-13■■■■■ 108.9
CPNE1-220ENST00000458038 HS6ST2Q96MM7 605 aa19.07■□□□□ 0.64
CPNE1-220ENST00000458038 SDF2Q99470 211 aa19.07■□□□□ 0.64
CPNE1-220ENST00000458038 LAT2Q9GZY6 243 aa19.07■□□□□ 0.64
CPNE1-220ENST00000458038 CISD1Q9NZ45 108 aaKnown RBP19.07■□□□□ 0.64
CPNE1-220ENST00000458038 HEATR1Q9H583 2144 aaKnown RBP19.06■□□□□ 0.64
CPNE1-220ENST00000458038 NPIPA5A0A0B4J1W7 369 aa19.06■□□□□ 0.64
CPNE1-220ENST00000458038 TMEM233B4DJY2 109 aa19.06■□□□□ 0.64
CPNE1-220ENST00000458038 NPIPA7E9PJI5 369 aa19.06■□□□□ 0.64
CPNE1-220ENST00000458038 CFLARO15519 480 aa19.06■□□□□ 0.64
CPNE1-220ENST00000458038 C6orf47O95873 294 aa19.06■□□□□ 0.64
CPNE1-220ENST00000458038 IFNA2P01563 188 aa19.06■□□□□ 0.64
CPNE1-220ENST00000458038 CHRNGP07510 517 aa19.06■□□□□ 0.64
CPNE1-220ENST00000458038 NPIPA8P0DM63 369 aa19.06■□□□□ 0.64
CPNE1-220ENST00000458038 ALDH3A1P30838 453 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms