RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 SHC1P29353 583 aa14.06□□□□□ -0.16
CHCHD3-204ENST00000457942 SLC7A1P30825 629 aa14.06□□□□□ -0.16
CHCHD3-204ENST00000457942 ETV4P43268 484 aa14.06□□□□□ -0.16
CHCHD3-204ENST00000457942 EMX2Q04743 252 aa14.06□□□□□ -0.16
CHCHD3-204ENST00000457942 GPR68Q15743 365 aa14.06□□□□□ -0.16
CHCHD3-204ENST00000457942 TMEM176BQ3YBM2 270 aaPredicted RBP14.06□□□□□ -0.16
CHCHD3-204ENST00000457942 KLHL26Q53HC5 615 aa14.06□□□□□ -0.16
CHCHD3-204ENST00000457942 BEX5Q5H9J7 111 aa14.06□□□□□ -0.16
CHCHD3-204ENST00000457942 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.06□□□□□ -0.16
CHCHD3-204ENST00000457942 C20orf204Q6ZNR8 217 aa14.06□□□□□ -0.16
CHCHD3-204ENST00000457942 C16orf62Q7Z3J2 963 aa14.06□□□□□ -0.16
CHCHD3-204ENST00000457942 RIMKLAQ8IXN7 391 aa14.06□□□□□ -0.16
CHCHD3-204ENST00000457942 CLECL1Q8IZS7 167 aa14.06□□□□□ -0.16
CHCHD3-204ENST00000457942 CLEC4FQ8N1N0 589 aa14.06□□□□□ -0.16
CHCHD3-204ENST00000457942 ABHD3Q8WU67 409 aa14.06□□□□□ -0.16
CHCHD3-204ENST00000457942 DPY30Q9C005 99 aa14.06□□□□□ -0.16
CHCHD3-204ENST00000457942 ACTR6Q9GZN1 396 aa14.06□□□□□ -0.16
CHCHD3-204ENST00000457942 ARID1AO14497 2285 aa14.06□□□□□ -0.16
CHCHD3-204ENST00000457942 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.05□□□□□ -0.16
CHCHD3-204ENST00000457942 DUXAA6NLW8 204 aa14.05□□□□□ -0.16
CHCHD3-204ENST00000457942 ZNF264O43296 627 aa14.05□□□□□ -0.16
CHCHD3-204ENST00000457942 AK1P00568 194 aa14.05□□□□□ -0.16
CHCHD3-204ENST00000457942 ADH6P28332 368 aa14.05□□□□□ -0.16
CHCHD3-204ENST00000457942 CLDN8P56748 225 aa14.05□□□□□ -0.16
CHCHD3-204ENST00000457942 ABCE1P61221 599 aaKnown RBP14.05□□□□□ -0.16
CHCHD3-204ENST00000457942 SELENBP1Q13228 472 aa14.05□□□□□ -0.16
CHCHD3-204ENST00000457942 CBFBQ13951 182 aa14.05□□□□□ -0.16
CHCHD3-204ENST00000457942 RNPS1Q15287 305 aaKnown RBP14.05□□□□□ -0.16
CHCHD3-204ENST00000457942 TOMM34Q15785 309 aaPredicted RBP14.05□□□□□ -0.16
CHCHD3-204ENST00000457942 PDZK1Q5T2W1 519 aa14.05□□□□□ -0.16
CHCHD3-204ENST00000457942 STAC2Q6ZMT1 411 aa14.05□□□□□ -0.16
CHCHD3-204ENST00000457942 FCRLAQ7L513 359 aa14.05□□□□□ -0.16
CHCHD3-204ENST00000457942 C6orf120Q7Z4R8 191 aa14.05□□□□□ -0.16
CHCHD3-204ENST00000457942 RNF128Q8TEB7 428 aa14.05□□□□□ -0.16
CHCHD3-204ENST00000457942 ZFP90Q8TF47 636 aa14.05□□□□□ -0.16
CHCHD3-204ENST00000457942 ARL8AQ96BM9 186 aa14.05□□□□□ -0.16
CHCHD3-204ENST00000457942 MRGPRX4Q96LA9 322 aa14.05□□□□□ -0.16
CHCHD3-204ENST00000457942 TMEM109Q9BVC6 243 aa14.05□□□□□ -0.16
CHCHD3-204ENST00000457942 SRXN1Q9BYN0 137 aa14.05□□□□□ -0.16
CHCHD3-204ENST00000457942 AKTIPQ9H8T0 292 aa14.05□□□□□ -0.16
CHCHD3-204ENST00000457942 EXD2Q9NVH0 621 aa14.05□□□□□ -0.16
CHCHD3-204ENST00000457942 ICAM5Q9UMF0 924 aa14.05□□□□□ -0.16
CHCHD3-204ENST00000457942 ACTL7BQ9Y614 415 aa14.05□□□□□ -0.16
CHCHD3-204ENST00000457942 STX11O75558 287 aa14.04□□□□□ -0.16
CHCHD3-204ENST00000457942 CPSF4O95639 269 aaKnown RBP14.04□□□□□ -0.16
CHCHD3-204ENST00000457942 PRKCAP17252 672 aa14.04□□□□□ -0.16
CHCHD3-204ENST00000457942 CASP9P55211 416 aa14.04□□□□□ -0.16
CHCHD3-204ENST00000457942 QPRTQ15274 297 aa14.04□□□□□ -0.16
CHCHD3-204ENST00000457942 SMU1Q2TAY7 513 aa14.04□□□□□ -0.16
CHCHD3-204ENST00000457942 ATAD3BQ5T9A4 648 aa14.04□□□□□ -0.16
CHCHD3-204ENST00000457942 C22orf34Q6ZV56 151 aa14.04□□□□□ -0.16
CHCHD3-204ENST00000457942 ANKRD46Q86W74 232 aa14.04□□□□□ -0.16
CHCHD3-204ENST00000457942 PHC2Q8IXK0 858 aa14.04□□□□□ -0.16
CHCHD3-204ENST00000457942 LRRC75A-AS1Q8N1F1 130 aa14.04□□□□□ -0.16
CHCHD3-204ENST00000457942 OR5W2Q8NH69 310 aa14.04□□□□□ -0.16
CHCHD3-204ENST00000457942 GPR119Q8TDV5 335 aa14.04□□□□□ -0.16
CHCHD3-204ENST00000457942 SDF2Q99470 211 aa14.04□□□□□ -0.16
CHCHD3-204ENST00000457942 PIP5K1AQ99755 562 aa14.04□□□□□ -0.16
CHCHD3-204ENST00000457942 PAIP2Q9BPZ3 127 aaKnown RBP14.04□□□□□ -0.16
CHCHD3-204ENST00000457942 TACO1Q9BSH4 297 aaKnown RBP14.04□□□□□ -0.16
CHCHD3-204ENST00000457942 KCNK9Q9NPC2 374 aa14.04□□□□□ -0.16
CHCHD3-204ENST00000457942 ASIC5Q9NY37 505 aa14.04□□□□□ -0.16
CHCHD3-204ENST00000457942 KLHL13Q9P2N7 655 aa14.04□□□□□ -0.16
CHCHD3-204ENST00000457942 RAP2CQ9Y3L5 183 aa14.04□□□□□ -0.16
CHCHD3-204ENST00000457942 CUBNO60494 3623 aa14.03□□□□□ -0.16
CHCHD3-204ENST00000457942 IGHV3-15A0A0B4J1V0 119 aa14.03□□□□□ -0.16
CHCHD3-204ENST00000457942 SERINC4A6NH21 518 aa14.03□□□□□ -0.16
CHCHD3-204ENST00000457942 RNASET2O00584 256 aaKnown RBP14.03□□□□□ -0.16
CHCHD3-204ENST00000457942 TM9SF1O15321 606 aa14.03□□□□□ -0.16
CHCHD3-204ENST00000457942 BIRC5O15392 142 aa14.03□□□□□ -0.16
CHCHD3-204ENST00000457942 EIF4E2O60573 245 aaKnown RBP14.03□□□□□ -0.16
CHCHD3-204ENST00000457942 ERLIN1O75477 346 aa14.03□□□□□ -0.16
CHCHD3-204ENST00000457942 PRKD3O94806 890 aa14.03□□□□□ -0.16
CHCHD3-204ENST00000457942 CSTAP01040 98 aa14.03□□□□□ -0.16
CHCHD3-204ENST00000457942 THBDP07204 575 aa14.03□□□□□ -0.16
CHCHD3-204ENST00000457942 BGNP21810 368 aa14.03□□□□□ -0.16
CHCHD3-204ENST00000457942 IL32P24001 234 aa14.03□□□□□ -0.16
CHCHD3-204ENST00000457942 CHI3L1P36222 383 aaPredicted RBP14.03□□□□□ -0.16
CHCHD3-204ENST00000457942 SLC1A6P48664 564 aa14.03□□□□□ -0.16
CHCHD3-204ENST00000457942 RPL14P50914 215 aaKnown RBP14.03□□□□□ -0.16
CHCHD3-204ENST00000457942 NR1H2P55055 460 aa14.03□□□□□ -0.16
CHCHD3-204ENST00000457942 C21orf58P58505 322 aa14.03□□□□□ -0.16
CHCHD3-204ENST00000457942 HPCAP84074 193 aa14.03□□□□□ -0.16
CHCHD3-204ENST00000457942 C3orf33Q6P1S2 294 aa14.03□□□□□ -0.16
CHCHD3-204ENST00000457942 ZNF704Q6ZNC4 412 aaPredicted RBP14.03□□□□□ -0.16
CHCHD3-204ENST00000457942 OLIG3Q7RTU3 272 aa14.03□□□□□ -0.16
CHCHD3-204ENST00000457942 TUSC5Q8IXB3 177 aa14.03□□□□□ -0.16
CHCHD3-204ENST00000457942 MAPK1IP1LQ8NDC0 245 aa14.03□□□□□ -0.16
CHCHD3-204ENST00000457942 VPS37AQ8NEZ2 397 aa14.03□□□□□ -0.16
CHCHD3-204ENST00000457942 STEAP2Q8NFT2 490 aa14.03□□□□□ -0.16
CHCHD3-204ENST00000457942 PLPPR2Q96GM1 343 aa14.03□□□□□ -0.16
CHCHD3-204ENST00000457942 OR5B2Q96R09 309 aa14.03□□□□□ -0.16
CHCHD3-204ENST00000457942 NMUR2Q9GZQ4 415 aa14.03□□□□□ -0.16
CHCHD3-204ENST00000457942 OR51I1Q9H343 314 aa14.03□□□□□ -0.16
CHCHD3-204ENST00000457942 SERHL2Q9H4I8 314 aa14.03□□□□□ -0.16
CHCHD3-204ENST00000457942 COQ10BQ9H8M1 238 aa14.03□□□□□ -0.16
CHCHD3-204ENST00000457942 MKLN1Q9UL63 735 aa14.03□□□□□ -0.16
CHCHD3-204ENST00000457942 GPR52Q9Y2T5 361 aa14.03□□□□□ -0.16
CHCHD3-204ENST00000457942 RAI1Q7Z5J4 1906 aaPredicted RBP14.02□□□□□ -0.16
CHCHD3-204ENST00000457942 A0A1W2PNR3 127 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms