RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 ENTPD4Q9Y227 616 aa11.51□□□□□ -0.57
LINC00959-201ENST00000456581 TRDV1A0A1B0GX56 115 aa11.51□□□□□ -0.57
LINC00959-201ENST00000456581 LEUTXA8MZ59 168 aa11.51□□□□□ -0.57
LINC00959-201ENST00000456581 KDM4EB2RXH2 506 aaPredicted RBP11.51□□□□□ -0.57
LINC00959-201ENST00000456581 INMT-MINDY4F8WBC2 141 aa11.51□□□□□ -0.57
LINC00959-201ENST00000456581 HCCSP53701 268 aa11.51□□□□□ -0.57
LINC00959-201ENST00000456581 E2F1Q01094 437 aa11.51□□□□□ -0.57
LINC00959-201ENST00000456581 FZD2Q14332 565 aa11.51□□□□□ -0.57
LINC00959-201ENST00000456581 CD200R1LQ6Q8B3 271 aa11.51□□□□□ -0.57
LINC00959-201ENST00000456581 ARL9Q6T311 187 aa11.51□□□□□ -0.57
LINC00959-201ENST00000456581 CD300LDQ6UXZ3 194 aa11.51□□□□□ -0.57
LINC00959-201ENST00000456581 RFLNBQ8N5W9 214 aa11.51□□□□□ -0.57
LINC00959-201ENST00000456581 SAMD12Q8N8I0 201 aa11.51□□□□□ -0.57
LINC00959-201ENST00000456581 OR8H1Q8NGG4 311 aa11.51□□□□□ -0.57
LINC00959-201ENST00000456581 RSC1A1Q92681 617 aa11.51□□□□□ -0.57
LINC00959-201ENST00000456581 DIO2Q92813 273 aa11.51□□□□□ -0.57
LINC00959-201ENST00000456581 ZNF681Q96N22 645 aa11.51□□□□□ -0.57
LINC00959-201ENST00000456581 SLC38A2Q96QD8 506 aa11.51□□□□□ -0.57
LINC00959-201ENST00000456581 TIMP4Q99727 224 aa11.51□□□□□ -0.57
LINC00959-201ENST00000456581 MED18Q9BUE0 208 aa11.51□□□□□ -0.57
LINC00959-201ENST00000456581 DPH1Q9BZG8 443 aa11.51□□□□□ -0.57
LINC00959-201ENST00000456581 HRASLS2Q9NWW9 162 aa11.51□□□□□ -0.57
LINC00959-201ENST00000456581 MBTPS2O43462 519 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 LDB3O75112 727 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 TRAPPC2P0DI81 140 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 TRAPPC2BP0DI82 140 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 KHKP50053 298 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 CLDN20P56880 219 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 SLC3A1Q07837 685 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 SLC25A35Q3KQZ1 300 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 TRILQ7L0X0 811 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 TMEM52Q8NDY8 209 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 OR11H7Q8NGC8 314 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 PFN4Q8NHR9 129 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 SUN5Q8TC36 379 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 RASSF5Q8WWW0 418 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 SARGQ9BW04 601 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 KLHL1Q9NR64 748 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 WSB2Q9NYS7 404 aaPredicted RBP11.5□□□□□ -0.57
LINC00959-201ENST00000456581 SLC7A7Q9UM01 511 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 TNFRSF10CO14798 259 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 ZGLP1P0C6A0 271 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 CSNK2A2P19784 350 aaPredicted RBP11.5□□□□□ -0.57
LINC00959-201ENST00000456581 HLA-DMAP28067 261 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 FGF9P31371 208 aaPredicted RBP11.5□□□□□ -0.57
LINC00959-201ENST00000456581 ACVR1BP36896 505 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 GCGRP47871 477 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 RRAS2P62070 204 aaPredicted RBP11.5□□□□□ -0.57
LINC00959-201ENST00000456581 TSPAN31Q12999 210 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 COL19A1Q14993 1142 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 POU4F3Q15319 338 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 ZNF322Q6U7Q0 402 aaPredicted RBP11.5□□□□□ -0.57
LINC00959-201ENST00000456581 WDR88Q6ZMY6 472 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 PLEKHM3Q6ZWE6 761 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 GDF7Q7Z4P5 450 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 GLRX5Q86SX6 157 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 GPR135Q8IZ08 494 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 TCTE3Q8IZS6 198 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 CYB561A3Q8NBI2 242 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 C17orf47Q8NEP4 570 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 CDS1Q92903 461 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 WDR89Q96FK6 387 aaPredicted RBP11.5□□□□□ -0.57
LINC00959-201ENST00000456581 C10orf90Q96M02 699 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 ABHD1Q96SE0 405 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 MRPS7Q9Y2R9 242 aaKnown RBP11.5□□□□□ -0.57
LINC00959-201ENST00000456581 CDH10Q9Y6N8 788 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 B4DGG1 531 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 H0YGG7 62 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 TOXO94900 526 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 SLC35G6P0C7Q6 338 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 NDUFS1P28331 727 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 IFNA8P32881 189 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 RGS8P57771 180 aaPredicted RBP11.5□□□□□ -0.57
LINC00959-201ENST00000456581 ARF3P61204 181 aaPredicted RBP11.5□□□□□ -0.57
LINC00959-201ENST00000456581 RPS15AP62244 130 aaKnown RBP11.5□□□□□ -0.57
LINC00959-201ENST00000456581 MLC1Q15049 377 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 SLC25A30Q5SVS4 291 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 IZUMO1Q8IYV9 350 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 C9orf62Q8N4C0 152 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 KLHL36Q8N4N3 616 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 POGLUT1Q8NBL1 392 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 NUP43Q8NFH3 380 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 OR7G2Q8NG99 324 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 OR10H4Q8NGA5 316 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 OR4D9Q8NGE8 314 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 GNPDA2Q8TDQ7 276 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 ELP4Q96EB1 424 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 MCHR1Q99705 422 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 FAM60AQ9NP50 221 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 NUDT15Q9NV35 164 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 FBXO34Q9NWN3 711 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 MRPL15Q9P015 296 aaKnown RBP11.5□□□□□ -0.57
LINC00959-201ENST00000456581 KCMF1Q9P0J7 381 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 SLC13A4Q9UKG4 626 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 RASD1Q9Y272 281 aa11.5□□□□□ -0.57
LINC00959-201ENST00000456581 EXOSC1Q9Y3B2 195 aaKnown RBP11.5□□□□□ -0.57
LINC00959-201ENST00000456581 SPTY2D1-AS1A0A0U1RR47 76 aa11.49□□□□□ -0.57
LINC00959-201ENST00000456581 PRAMEF26H0Y7S4 382 aa11.49□□□□□ -0.57
LINC00959-201ENST00000456581 TEX46H3BTG2 121 aa11.49□□□□□ -0.57
LINC00959-201ENST00000456581 TNFP01375 233 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms