RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 PRPF19Q9UMS4 504 aaKnown RBP14.2□□□□□ -0.14
VCX3B-204ENST00000453306 LIPGQ9Y5X9 500 aa14.2□□□□□ -0.14
VCX3B-204ENST00000453306 TMEM247A6NEH6 219 aa14.19□□□□□ -0.14
VCX3B-204ENST00000453306 SHISA8B8ZZ34 492 aa14.19□□□□□ -0.14
VCX3B-204ENST00000453306 ACOT8O14734 319 aa14.19□□□□□ -0.14
VCX3B-204ENST00000453306 ZNF264O43296 627 aa14.19□□□□□ -0.14
VCX3B-204ENST00000453306 HCRTR2O43614 444 aa14.19□□□□□ -0.14
VCX3B-204ENST00000453306 GKN3PP0CG01 181 aa14.19□□□□□ -0.14
VCX3B-204ENST00000453306 UBL4AP11441 157 aa14.19□□□□□ -0.14
VCX3B-204ENST00000453306 HPGDP15428 266 aa14.19□□□□□ -0.14
VCX3B-204ENST00000453306 IL7RP16871 459 aa14.19□□□□□ -0.14
VCX3B-204ENST00000453306 TNFRSF1BP20333 461 aa14.19□□□□□ -0.14
VCX3B-204ENST00000453306 PRKAR1BP31321 381 aa14.19□□□□□ -0.14
VCX3B-204ENST00000453306 MASP1P48740 699 aa14.19□□□□□ -0.14
VCX3B-204ENST00000453306 ZNF136P52737 540 aa14.19□□□□□ -0.14
VCX3B-204ENST00000453306 B3GALT5-AS1P59052 145 aa14.19□□□□□ -0.14
VCX3B-204ENST00000453306 EIPR1Q53HC9 387 aa14.19□□□□□ -0.14
VCX3B-204ENST00000453306 CYBRD1Q53TN4 286 aa14.19□□□□□ -0.14
VCX3B-204ENST00000453306 GLYATQ6IB77 296 aa14.19□□□□□ -0.14
VCX3B-204ENST00000453306 EIF3MQ7L2H7 374 aaKnown RBP14.19□□□□□ -0.14
VCX3B-204ENST00000453306 FGD2Q7Z6J4 655 aa14.19□□□□□ -0.14
VCX3B-204ENST00000453306 PATL1Q86TB9 770 aaKnown RBP14.19□□□□□ -0.14
VCX3B-204ENST00000453306 TSPYL5Q86VY4 417 aaPredicted RBP14.19□□□□□ -0.14
VCX3B-204ENST00000453306 RBM45Q8IUH3 476 aaKnown RBP14.19□□□□□ -0.14
VCX3B-204ENST00000453306 ARMC8Q8IUR7 673 aa14.19□□□□□ -0.14
VCX3B-204ENST00000453306 EID3Q8N140 333 aa14.19□□□□□ -0.14
VCX3B-204ENST00000453306 ZNF527Q8NB42 609 aa14.19□□□□□ -0.14
VCX3B-204ENST00000453306 B4GALNT2Q8NHY0 566 aa14.19□□□□□ -0.14
VCX3B-204ENST00000453306 POC1BQ8TC44 478 aa14.19□□□□□ -0.14
VCX3B-204ENST00000453306 GPR119Q8TDV5 335 aa14.19□□□□□ -0.14
VCX3B-204ENST00000453306 OIT3Q8WWZ8 545 aa14.19□□□□□ -0.14
VCX3B-204ENST00000453306 ZDHHC11Q9H8X9 412 aa14.19□□□□□ -0.14
VCX3B-204ENST00000453306 BOKQ9UMX3 212 aaPredicted RBP14.19□□□□□ -0.14
VCX3B-204ENST00000453306 IFT52Q9Y366 437 aa14.19□□□□□ -0.14
VCX3B-204ENST00000453306 SVILO95425 2214 aa14.18□□□□□ -0.14
VCX3B-204ENST00000453306 GTPBP1O00178 669 aaKnown RBP14.18□□□□□ -0.14
VCX3B-204ENST00000453306 ARPC2O15144 300 aa14.18□□□□□ -0.14
VCX3B-204ENST00000453306 EFNA2O43921 213 aa14.18□□□□□ -0.14
VCX3B-204ENST00000453306 EIF4E2O60573 245 aaKnown RBP14.18□□□□□ -0.14
VCX3B-204ENST00000453306 CBR3O75828 277 aa14.18□□□□□ -0.14
VCX3B-204ENST00000453306 CYP7B1O75881 506 aa14.18□□□□□ -0.14
VCX3B-204ENST00000453306 DNAJC8O75937 253 aaPredicted RBP14.18□□□□□ -0.14
VCX3B-204ENST00000453306 ATP5HO75947 161 aa14.18□□□□□ -0.14
VCX3B-204ENST00000453306 LGI1O95970 557 aa14.18□□□□□ -0.14
VCX3B-204ENST00000453306 ATP6V1B2P21281 511 aa14.18□□□□□ -0.14
VCX3B-204ENST00000453306 FUT4P22083 530 aa14.18□□□□□ -0.14
VCX3B-204ENST00000453306 CLK3P49761 638 aaKnown RBP14.18□□□□□ -0.14
VCX3B-204ENST00000453306 PLGLB1Q02325 96 aa14.18□□□□□ -0.14
VCX3B-204ENST00000453306 NPTX1Q15818 432 aa14.18□□□□□ -0.14
VCX3B-204ENST00000453306 C3AR1Q16581 482 aa14.18□□□□□ -0.14
VCX3B-204ENST00000453306 TMEM44Q2T9K0 475 aa14.18□□□□□ -0.14
VCX3B-204ENST00000453306 DNAL1Q4LDG9 190 aa14.18□□□□□ -0.14
VCX3B-204ENST00000453306 LIN52Q52LA3 116 aa14.18□□□□□ -0.14
VCX3B-204ENST00000453306 RNF220Q5VTB9 566 aa14.18□□□□□ -0.14
VCX3B-204ENST00000453306 Q6ZPB1 254 aaPredicted RBP14.18□□□□□ -0.14
VCX3B-204ENST00000453306 CCDC121Q6ZUS5 278 aa14.18□□□□□ -0.14
VCX3B-204ENST00000453306 TSEN54Q7Z6J9 526 aaKnown RBP14.18□□□□□ -0.14
VCX3B-204ENST00000453306 YRDCQ86U90 279 aaKnown RBP14.18□□□□□ -0.14
VCX3B-204ENST00000453306 KRT73Q86Y46 540 aa14.18□□□□□ -0.14
VCX3B-204ENST00000453306 SPPL2CQ8IUH8 684 aa14.18□□□□□ -0.14
VCX3B-204ENST00000453306 GRAMD2AQ8IUY3 354 aa14.18□□□□□ -0.14
VCX3B-204ENST00000453306 SLC30A8Q8IWU4 369 aa14.18□□□□□ -0.14
VCX3B-204ENST00000453306 OR5M1Q8NGP8 315 aa14.18□□□□□ -0.14
VCX3B-204ENST00000453306 C1GALT1C1Q96EU7 318 aa14.18□□□□□ -0.14
VCX3B-204ENST00000453306 LURAP1Q96LR2 239 aa14.18□□□□□ -0.14
VCX3B-204ENST00000453306 ZNF607Q96SK3 696 aa14.18□□□□□ -0.14
VCX3B-204ENST00000453306 ARHGDIGQ99819 225 aa14.18□□□□□ -0.14
VCX3B-204ENST00000453306 SDHAF3Q9NRP4 125 aa14.18□□□□□ -0.14
VCX3B-204ENST00000453306 ZNF835Q9Y2P0 537 aa14.18□□□□□ -0.14
VCX3B-204ENST00000453306 EML6Q6ZMW3 1958 aa14.17□□□□□ -0.14
VCX3B-204ENST00000453306 NPIPA5E9PKD4 350 aa14.17□□□□□ -0.14
VCX3B-204ENST00000453306 M0R3H8 397 aa14.17□□□□□ -0.14
VCX3B-204ENST00000453306 CDC40O60508 579 aaKnown RBP eCLIP14.17□□□□□ -0.14
VCX3B-204ENST00000453306 PDE9AO76083 593 aa14.17□□□□□ -0.14
VCX3B-204ENST00000453306 HPNP05981 417 aa14.17□□□□□ -0.14
VCX3B-204ENST00000453306 LINGO3P0C6S8 592 aa14.17□□□□□ -0.14
VCX3B-204ENST00000453306 ENDOUP21128 410 aaKnown RBP14.17□□□□□ -0.14
VCX3B-204ENST00000453306 TCEA1P23193 301 aaKnown RBP14.17□□□□□ -0.14
VCX3B-204ENST00000453306 ME2P23368 584 aa14.17□□□□□ -0.14
VCX3B-204ENST00000453306 PSMA4P25789 261 aaKnown RBP14.17□□□□□ -0.14
VCX3B-204ENST00000453306 SSTR2P30874 369 aa14.17□□□□□ -0.14
VCX3B-204ENST00000453306 P2RX1P51575 399 aa14.17□□□□□ -0.14
VCX3B-204ENST00000453306 RIPPLY3P57055 190 aa14.17□□□□□ -0.14
VCX3B-204ENST00000453306 HSF1Q00613 529 aa14.17□□□□□ -0.14
VCX3B-204ENST00000453306 LARS2Q15031 903 aaKnown RBP14.17□□□□□ -0.14
VCX3B-204ENST00000453306 SPATS1Q496A3 300 aa14.17□□□□□ -0.14
VCX3B-204ENST00000453306 LRRC23Q53EV4 343 aaPredicted RBP14.17□□□□□ -0.14
VCX3B-204ENST00000453306 WIPI1Q5MNZ9 446 aaPredicted RBP14.17□□□□□ -0.14
VCX3B-204ENST00000453306 INTS11Q5TA45 600 aaKnown RBP14.17□□□□□ -0.14
VCX3B-204ENST00000453306 CBLL1Q75N03 491 aa14.17□□□□□ -0.14
VCX3B-204ENST00000453306 VTCN1Q7Z7D3 282 aa14.17□□□□□ -0.14
VCX3B-204ENST00000453306 MISPQ8IVT2 679 aa14.17□□□□□ -0.14
VCX3B-204ENST00000453306 CMIPQ8IY22 773 aa14.17□□□□□ -0.14
VCX3B-204ENST00000453306 ULK2Q8IYT8 1036 aa14.17□□□□□ -0.14
VCX3B-204ENST00000453306 ARHGAP24Q8N264 748 aa14.17□□□□□ -0.14
VCX3B-204ENST00000453306 FAM83FQ8NEG4 500 aaPredicted RBP14.17□□□□□ -0.14
VCX3B-204ENST00000453306 OR4K17Q8NGC6 315 aa14.17□□□□□ -0.14
VCX3B-204ENST00000453306 OR5W2Q8NH69 310 aa14.17□□□□□ -0.14
VCX3B-204ENST00000453306 PINK1Q9BXM7 581 aa14.17□□□□□ -0.14
VCX3B-204ENST00000453306 OR2B2Q9GZK3 357 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms