RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 SHC1P29353 583 aa11.52□□□□□ -0.57
CHD3-206ENST00000452447 SLC7A1P30825 629 aa11.52□□□□□ -0.57
CHD3-206ENST00000452447 CLNS1AP54105 237 aaKnown RBP11.52□□□□□ -0.57
CHD3-206ENST00000452447 CASP9P55211 416 aa11.52□□□□□ -0.57
CHD3-206ENST00000452447 ADAM8P78325 824 aa11.52□□□□□ -0.57
CHD3-206ENST00000452447 BST1Q10588 318 aa11.52□□□□□ -0.57
CHD3-206ENST00000452447 RNPS1Q15287 305 aaKnown RBP11.52□□□□□ -0.57
CHD3-206ENST00000452447 ZNF239Q16600 458 aaKnown RBP11.52□□□□□ -0.57
CHD3-206ENST00000452447 ATAD3BQ5T9A4 648 aa11.52□□□□□ -0.57
CHD3-206ENST00000452447 XAGE5Q8WWM1 108 aa11.52□□□□□ -0.57
CHD3-206ENST00000452447 OR51I1Q9H343 314 aa11.52□□□□□ -0.57
CHD3-206ENST00000452447 C12orf49Q9H741 205 aa11.52□□□□□ -0.57
CHD3-206ENST00000452447 MEAF6Q9HAF1 191 aa11.52□□□□□ -0.57
CHD3-206ENST00000452447 PNPOQ9NVS9 261 aa11.52□□□□□ -0.57
CHD3-206ENST00000452447 BEX4Q9NWD9 120 aaPredicted RBP11.52□□□□□ -0.57
CHD3-206ENST00000452447 MKLN1Q9UL63 735 aa11.52□□□□□ -0.57
CHD3-206ENST00000452447 USF3Q68DE3 2245 aa11.51□□□□□ -0.57
CHD3-206ENST00000452447 NF1P21359 2839 aa11.51□□□□□ -0.57
CHD3-206ENST00000452447 E9PBE3 544 aa11.51□□□□□ -0.57
CHD3-206ENST00000452447 EFNA2O43921 213 aa11.51□□□□□ -0.57
CHD3-206ENST00000452447 FCMRO60667 390 aa11.51□□□□□ -0.57
CHD3-206ENST00000452447 CSTAP01040 98 aa11.51□□□□□ -0.57
CHD3-206ENST00000452447 OR12D1P0DN82 309 aa11.51□□□□□ -0.57
CHD3-206ENST00000452447 CD53P19397 219 aa11.51□□□□□ -0.57
CHD3-206ENST00000452447 AGTR1P30556 359 aa11.51□□□□□ -0.57
CHD3-206ENST00000452447 CHI3L1P36222 383 aaPredicted RBP11.51□□□□□ -0.57
CHD3-206ENST00000452447 FOXD4Q12950 439 aaPredicted RBP11.51□□□□□ -0.57
CHD3-206ENST00000452447 SELENBP1Q13228 472 aa11.51□□□□□ -0.57
CHD3-206ENST00000452447 QPRTQ15274 297 aa11.51□□□□□ -0.57
CHD3-206ENST00000452447 ZNF141Q15928 474 aa11.51□□□□□ -0.57
CHD3-206ENST00000452447 FAM174BQ3ZCQ3 159 aa11.51□□□□□ -0.57
CHD3-206ENST00000452447 SPANXN4Q5MJ08 99 aa11.51□□□□□ -0.57
CHD3-206ENST00000452447 TNFAIP8L2Q6P589 184 aaPredicted RBP11.51□□□□□ -0.57
CHD3-206ENST00000452447 MIPOL1Q8TD10 442 aa11.51□□□□□ -0.57
CHD3-206ENST00000452447 RNF128Q8TEB7 428 aa11.51□□□□□ -0.57
CHD3-206ENST00000452447 ZFP90Q8TF47 636 aa11.51□□□□□ -0.57
CHD3-206ENST00000452447 ABHD3Q8WU67 409 aa11.51□□□□□ -0.57
CHD3-206ENST00000452447 ARSGQ96EG1 525 aa11.51□□□□□ -0.57
CHD3-206ENST00000452447 ZNF350Q9GZX5 532 aa11.51□□□□□ -0.57
CHD3-206ENST00000452447 CADP27708 2225 aa11.51□□□□□ -0.57
CHD3-206ENST00000452447 DYNC1I1O14576 645 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 ANKRD28O15084 1053 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 SIAH2O43255 324 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 DIAPH2O60879 1101 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 SCN2BO60939 215 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 UGT2B17O75795 530 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 UBTFL6P0CB48 400 aaPredicted RBP11.5□□□□□ -0.57
CHD3-206ENST00000452447 S100A3P33764 101 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 PHC1P78364 1004 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 CASP8Q14790 479 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 STAC2Q6ZMT1 411 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 EIF3MQ7L2H7 374 aaKnown RBP11.5□□□□□ -0.57
CHD3-206ENST00000452447 FCRLAQ7L513 359 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 TMEM234Q8WY98 164 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 RAB8BQ92930 207 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 PIGTQ969N2 578 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 THUMPD3Q9BV44 507 aaKnown RBP11.5□□□□□ -0.57
CHD3-206ENST00000452447 SRXN1Q9BYN0 137 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 LAT2Q9GZY6 243 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 UBTD1Q9HAC8 227 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 THAP1Q9NVV9 213 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 KLHL13Q9P2N7 655 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 MARCOQ9UEW3 520 aaPredicted RBP11.5□□□□□ -0.57
CHD3-206ENST00000452447 WDR45Q9Y484 360 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 TMEM120BA0PK00 339 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 PRKD3O94806 890 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 PGCP20142 388 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 FPR1P21462 350 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 KHKP50053 298 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 NME5P56597 212 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 RAC3P60763 192 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 HPCAP84074 193 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 SKP2Q13309 424 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 TIGD2Q4W5G0 525 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 SLC25A53Q5H9E4 307 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 BEX5Q5H9J7 111 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 SAXO2Q658L1 398 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 ATG16L1Q676U5 607 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 HEPHL1Q6MZM0 1159 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 OGFOD2Q6N063 350 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 C3orf33Q6P1S2 294 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 C22orf34Q6ZV56 151 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 OLIG3Q7RTU3 272 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 TUSC5Q8IXB3 177 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 SLC43A2Q8N370 569 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 TRIML2Q8N7C3 387 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 WFDC11Q8NEX6 87 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 MGARPQ8TDB4 240 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 ST8SIA1Q92185 356 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 ROPN1LQ96C74 230 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 NEURL3Q96EH8 262 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 SLC35A5Q9BS91 424 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 COQ10BQ9H8M1 238 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 GP6Q9HCN6 339 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 POLE3Q9NRF9 147 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 SERINC1Q9NRX5 453 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 KCNE5Q9UJ90 142 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 SLC35A3Q9Y2D2 325 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 GPR52Q9Y2T5 361 aa11.5□□□□□ -0.57
CHD3-206ENST00000452447 A0A1W2PNR3 127 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms