RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 LRRC74AQ0VAA2 488 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 FZD5Q13467 585 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 IL10RAQ13651 578 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 C2orf68Q2NKX9 166 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 LINC00303Q3SY05 128 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 DCAF12L2Q5VW00 463 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 HEPHL1Q6MZM0 1159 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 CDC73Q6P1J9 531 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 TMEM71Q6P5X7 295 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 OR4K1Q8NGD4 311 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 OR4D9Q8NGE8 314 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 AKR7LQ8NHP1 331 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 RFKQ969G6 155 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 PHYHIPLQ96FC7 376 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 UTP23Q9BRU9 249 aaKnown RBP8.03□□□□□ -1.12
LSM5-208ENST00000450169 SMG9Q9H0W8 520 aaKnown RBP8.03□□□□□ -1.12
LSM5-208ENST00000450169 TMPRSS5Q9H3S3 457 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 REEP4Q9H6H4 257 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 PLEKHA1Q9HB21 404 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 CSNK1G1Q9HCP0 422 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 CHMP1AQ9HD42 196 aaPredicted RBP8.03□□□□□ -1.12
LSM5-208ENST00000450169 ARL15Q9NXU5 204 aa8.03□□□□□ -1.12
LSM5-208ENST00000450169 STOX2Q9P2F5 926 aaPredicted RBP8.03□□□□□ -1.12
LSM5-208ENST00000450169 WDR90Q96KV7 1748 aa8.02□□□□□ -1.12
LSM5-208ENST00000450169 A0A0D9SG52 128 aa8.02□□□□□ -1.13
LSM5-208ENST00000450169 A0A1W2PPE3 182 aa8.02□□□□□ -1.13
LSM5-208ENST00000450169 KANTRA0A1W2PQU2 76 aa8.02□□□□□ -1.13
LSM5-208ENST00000450169 C9orf170A2RU37 121 aa8.02□□□□□ -1.13
LSM5-208ENST00000450169 METTL21EPA6NDL7 271 aa8.02□□□□□ -1.13
LSM5-208ENST00000450169 OR6C76A6NM76 312 aa8.02□□□□□ -1.13
LSM5-208ENST00000450169 SLC25A12O75746 678 aa8.02□□□□□ -1.13
LSM5-208ENST00000450169 UBXN7O94888 489 aa8.02□□□□□ -1.13
LSM5-208ENST00000450169 SLC25A14O95258 325 aaPredicted RBP8.02□□□□□ -1.13
LSM5-208ENST00000450169 SERPIND1P05546 499 aa8.02□□□□□ -1.13
LSM5-208ENST00000450169 HOXC4P09017 264 aaPredicted RBP8.02□□□□□ -1.13
LSM5-208ENST00000450169 ZNF8P17098 575 aaPredicted RBP8.02□□□□□ -1.13
LSM5-208ENST00000450169 HOXA6P31267 233 aa8.02□□□□□ -1.13
LSM5-208ENST00000450169 ATP6V1E1P36543 226 aa8.02□□□□□ -1.13
LSM5-208ENST00000450169 ACVRL1P37023 503 aa8.02□□□□□ -1.13
LSM5-208ENST00000450169 ASMTP46597 345 aa8.02□□□□□ -1.13
LSM5-208ENST00000450169 HMGCS2P54868 508 aa8.02□□□□□ -1.13
LSM5-208ENST00000450169 SMIM11AP58511 58 aa8.02□□□□□ -1.13
LSM5-208ENST00000450169 RNF4P78317 190 aa8.02□□□□□ -1.13
LSM5-208ENST00000450169 CCINQ13939 588 aa8.02□□□□□ -1.13
LSM5-208ENST00000450169 RAB12Q6IQ22 244 aa8.02□□□□□ -1.13
LSM5-208ENST00000450169 CXXC5Q7LFL8 322 aaKnown RBP8.02□□□□□ -1.13
LSM5-208ENST00000450169 LRRC70Q7Z2Q7 622 aa8.02□□□□□ -1.13
LSM5-208ENST00000450169 DNAJB7Q7Z6W7 309 aaPredicted RBP8.02□□□□□ -1.13
LSM5-208ENST00000450169 ZNF683Q8IZ20 524 aa8.02□□□□□ -1.13
LSM5-208ENST00000450169 ZNF561Q8N587 486 aa8.02□□□□□ -1.13
LSM5-208ENST00000450169 ZBTB2Q8N680 514 aa8.02□□□□□ -1.13
LSM5-208ENST00000450169 C15orf54Q8N8G6 183 aa8.02□□□□□ -1.13
LSM5-208ENST00000450169 CHST13Q8NET6 341 aa8.02□□□□□ -1.13
LSM5-208ENST00000450169 OR5AK3PQ8NH89 298 aa8.02□□□□□ -1.13
LSM5-208ENST00000450169 GOT1L1Q8NHS2 421 aaPredicted RBP8.02□□□□□ -1.13
LSM5-208ENST00000450169 RNASE11Q8TAA1 199 aaKnown RBP8.02□□□□□ -1.13
LSM5-208ENST00000450169 SCAMP5Q8TAC9 235 aa8.02□□□□□ -1.13
LSM5-208ENST00000450169 ACOT11Q8WXI4 607 aaPredicted RBP8.02□□□□□ -1.13
LSM5-208ENST00000450169 ECHDC3Q96DC8 303 aa8.02□□□□□ -1.13
LSM5-208ENST00000450169 ART5Q96L15 291 aa8.02□□□□□ -1.13
LSM5-208ENST00000450169 RHOVQ96L33 236 aa8.02□□□□□ -1.13
LSM5-208ENST00000450169 SSX3Q99909 188 aa8.02□□□□□ -1.13
LSM5-208ENST00000450169 RSRP1Q9BUV0 290 aa8.02□□□□□ -1.13
LSM5-208ENST00000450169 PINK1Q9BXM7 581 aa8.02□□□□□ -1.13
LSM5-208ENST00000450169 SEC11CQ9BY50 192 aa8.02□□□□□ -1.13
LSM5-208ENST00000450169 PLA2G12AQ9BZM1 189 aa8.02□□□□□ -1.13
LSM5-208ENST00000450169 EGLN1Q9GZT9 426 aa8.02□□□□□ -1.13
LSM5-208ENST00000450169 MVB12BQ9H7P6 319 aa8.02□□□□□ -1.13
LSM5-208ENST00000450169 ISG20L2Q9H9L3 353 aaKnown RBP8.02□□□□□ -1.13
LSM5-208ENST00000450169 KCNK12Q9HB15 430 aa8.02□□□□□ -1.13
LSM5-208ENST00000450169 DZANK1Q9NVP4 752 aa8.02□□□□□ -1.13
LSM5-208ENST00000450169 KLF15Q9UIH9 416 aa8.02□□□□□ -1.13
LSM5-208ENST00000450169 TIMM13Q9Y5L4 95 aaPredicted RBP8.02□□□□□ -1.13
LSM5-208ENST00000450169 NPFFR2Q9Y5X5 522 aa8.02□□□□□ -1.13
LSM5-208ENST00000450169 SIRT4Q9Y6E7 314 aaPredicted RBP8.02□□□□□ -1.13
LSM5-208ENST00000450169 TRPM7Q96QT4 1865 aa8.02□□□□□ -1.13
LSM5-208ENST00000450169 MGAT4DA6NG13 374 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 RFPL4AA6NLU0 287 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 ZNF879B4DU55 563 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 RFPL4AL1F8VTS6 287 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 OIP5O43482 229 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 PRAMEF11O60813 436 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 REM1O75628 298 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 NDUFB6O95139 128 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 C6orf47O95873 294 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 ACTL6AO96019 429 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 IGHV2-5P01817 119 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 ANXA4P09525 319 aaPredicted RBP8.01□□□□□ -1.13
LSM5-208ENST00000450169 OR8U8P0C7N1 319 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 KCNE1P15382 129 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 ZNF7P17097 686 aaPredicted RBP8.01□□□□□ -1.13
LSM5-208ENST00000450169 TYRP1P17643 537 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 AGAP20933 346 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 IGFBP6P24592 240 aaPredicted RBP8.01□□□□□ -1.13
LSM5-208ENST00000450169 TRHRP34981 398 aaPredicted RBP8.01□□□□□ -1.13
LSM5-208ENST00000450169 RPIAP49247 311 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 CAP1Q01518 475 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 CACNG1Q06432 222 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 DDX39BQ13838 428 aaKnown RBP8.01□□□□□ -1.13
LSM5-208ENST00000450169 FAAP20Q6NZ36 180 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms