RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 SPHK1Q9NYA1 384 aa9.55□□□□□ -0.88
SCN10A-201ENST00000449082 WIF1Q9Y5W5 379 aa9.55□□□□□ -0.88
SCN10A-201ENST00000449082 DCDC2BA2VCK2 349 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 TLCD2A6NGC4 264 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 MEN1O00255 615 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 CD34P28906 385 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 MAGEA3P43357 314 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 RBM39Q14498 530 aaKnown RBP9.54□□□□□ -0.88
SCN10A-201ENST00000449082 DUSP6Q16828 381 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 OR5M10Q6IEU7 315 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 C22orf15Q8WYQ4 148 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 OR52D1Q9H346 318 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 FAM230AA0A1W2PPH8 454 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 SLC16A7O60669 478 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 ADH6P28332 368 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 IMPA1P29218 277 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 GPR50Q13585 617 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 C5orf46Q6UWT4 87 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 RAB39BQ96DA2 213 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 TP63Q9H3D4 680 aaPredicted RBP9.54□□□□□ -0.88
SCN10A-201ENST00000449082 CITO14578 2027 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 NPR2P20594 1047 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 HOXC5Q00444 222 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 REEP5Q00765 189 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 CDK5R2Q13319 367 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 PARM1Q6UWI2 310 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 BCL7BQ9BQE9 202 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 MAN2C1Q9NTJ4 1040 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 HHLA1C9JL84 531 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 KLKB1P03952 638 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 FNTBP49356 437 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 RAB40BQ12829 278 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 GPR18Q14330 331 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 TAZQ16635 292 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 TRNP1Q6NT89 227 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 GDPGP1Q6ZNW5 385 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 CBLL1Q75N03 491 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 ZNF610Q8N9Z0 462 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 FOXRED1Q96CU9 486 aaPredicted RBP9.54□□□□□ -0.88
SCN10A-201ENST00000449082 SENP5Q96HI0 755 aaPredicted RBP9.54□□□□□ -0.88
SCN10A-201ENST00000449082 SLC30A3Q99726 388 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 OR2S2Q9NQN1 319 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 CARD8Q9Y2G2 431 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 MMACHCQ9Y4U1 282 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 MYH4Q9Y623 1939 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 TRAV27A0A087WT01 109 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 B8ZZF3 427 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 HOXC11O43248 304 aaPredicted RBP9.54□□□□□ -0.88
SCN10A-201ENST00000449082 NUDT21O43809 227 aaKnown RBP9.54□□□□□ -0.88
SCN10A-201ENST00000449082 ITGBL1O95965 494 aaPredicted RBP9.54□□□□□ -0.88
SCN10A-201ENST00000449082 PTH2RP49190 550 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 POU3F1Q03052 451 aaPredicted RBP9.54□□□□□ -0.88
SCN10A-201ENST00000449082 CHRNEQ04844 493 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 EIF2S3LQ2VIR3 472 aaKnown RBP9.54□□□□□ -0.88
SCN10A-201ENST00000449082 BCL7AQ4VC05 210 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 NKAIN2Q5VXU1 208 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 PLCXD3Q63HM9 321 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 PODNL1Q6PEZ8 512 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 ASB12Q8WXK4 309 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 C7orf34Q96L11 122 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 EMCNQ9ULC0 261 aa9.54□□□□□ -0.88
SCN10A-201ENST00000449082 RAD1O60671 282 aa9.53□□□□□ -0.88
SCN10A-201ENST00000449082 CHRM4P08173 479 aa9.53□□□□□ -0.88
SCN10A-201ENST00000449082 MS4A2Q01362 244 aa9.53□□□□□ -0.88
SCN10A-201ENST00000449082 MBTPS1Q14703 1052 aa9.53□□□□□ -0.88
SCN10A-201ENST00000449082 SYPL1Q16563 259 aa9.53□□□□□ -0.88
SCN10A-201ENST00000449082 UBE2UQ5VVX9 321 aa9.53□□□□□ -0.88
SCN10A-201ENST00000449082 PLAG1Q6DJT9 500 aa9.53□□□□□ -0.88
SCN10A-201ENST00000449082 PRR18Q8N4B5 295 aa9.53□□□□□ -0.88
SCN10A-201ENST00000449082 RNF175Q8N4F7 328 aa9.53□□□□□ -0.88
SCN10A-201ENST00000449082 UBTD2Q8WUN7 234 aa9.53□□□□□ -0.88
SCN10A-201ENST00000449082 SLC6A20Q9NP91 592 aa9.53□□□□□ -0.88
SCN10A-201ENST00000449082 INPP5EQ9NRR6 644 aa9.53□□□□□ -0.88
SCN10A-201ENST00000449082 THSD1Q9NS62 852 aa9.53□□□□□ -0.88
SCN10A-201ENST00000449082 FGF21Q9NSA1 209 aa9.53□□□□□ -0.88
SCN10A-201ENST00000449082 MYH15Q9Y2K3 1946 aa9.53□□□□□ -0.88
SCN10A-201ENST00000449082 ATF4P18848 351 aaPredicted RBP9.53□□□□□ -0.88
SCN10A-201ENST00000449082 HBA1P69905 142 aa9.53□□□□□ -0.88
SCN10A-201ENST00000449082 ADARB1P78563 741 aaKnown RBP9.53□□□□□ -0.88
SCN10A-201ENST00000449082 GARNL3Q5VVW2 1013 aa9.53□□□□□ -0.88
SCN10A-201ENST00000449082 ASB17Q8WXJ9 295 aa9.53□□□□□ -0.88
SCN10A-201ENST00000449082 C3orf30Q96M34 536 aa9.53□□□□□ -0.88
SCN10A-201ENST00000449082 ASB16Q96NS5 453 aa9.53□□□□□ -0.88
SCN10A-201ENST00000449082 CACNG6Q9BXT2 260 aa9.53□□□□□ -0.88
SCN10A-201ENST00000449082 NXF5Q9H1B4 397 aaKnown RBP9.53□□□□□ -0.88
SCN10A-201ENST00000449082 MYEF2Q9P2K5 600 aaKnown RBP9.53□□□□□ -0.88
SCN10A-201ENST00000449082 PADI1Q9ULC6 663 aa9.53□□□□□ -0.88
SCN10A-201ENST00000449082 EMC9Q9Y3B6 208 aa9.53□□□□□ -0.88
SCN10A-201ENST00000449082 SLC22A7Q9Y694 548 aa9.53□□□□□ -0.88
SCN10A-201ENST00000449082 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.53□□□□□ -0.88
SCN10A-201ENST00000449082 EEF1E1-BLOC1S5C9J1V9 151 aa9.53□□□□□ -0.88
SCN10A-201ENST00000449082 PPP6CO00743 305 aa9.53□□□□□ -0.88
SCN10A-201ENST00000449082 SUSD5O60279 629 aa9.53□□□□□ -0.88
SCN10A-201ENST00000449082 IRS1P35568 1242 aa9.53□□□□□ -0.88
SCN10A-201ENST00000449082 KIAA1024LP59773 190 aa9.53□□□□□ -0.88
SCN10A-201ENST00000449082 MRPL2Q5T653 305 aaKnown RBP9.53□□□□□ -0.88
SCN10A-201ENST00000449082 PLPP6Q8IY26 295 aa9.53□□□□□ -0.88
SCN10A-201ENST00000449082 TMEM178AQ8NBL3 297 aa9.53□□□□□ -0.88
SCN10A-201ENST00000449082 ADAMTS19Q8TE59 1207 aa9.53□□□□□ -0.88
SCN10A-201ENST00000449082 OBP2BQ9NPH6 170 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms