RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 MT-ND5P03915 603 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 RD3LP0DJH9 198 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 PRF1P14222 555 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 ADCYAP1P18509 176 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 BTF3P20290 206 aaKnown RBP8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 PGDP52209 483 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 DCDP81605 110 aaKnown RBP8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 SEMG2Q02383 582 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 TSPAN31Q12999 210 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 PDE7AQ13946 482 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 ZNF124Q15973 351 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 DBX2Q6ZNG2 339 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 OR2W3Q7Z3T1 314 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 NAA40Q86UY6 237 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 COMTD1Q86VU5 262 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 TMEM99Q8N816 258 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 DNAAF1Q8NEP3 725 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 OR13C5Q8NGS8 318 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 SP7Q8TDD2 431 aaPredicted RBP8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 TCEAL7Q9BRU2 100 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 NDC1Q9BTX1 674 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 ZDHHC3Q9NYG2 299 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 DHCR7Q9UBM7 475 aaKnown RBP8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 LHX6Q9UPM6 363 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 ENTPD4Q9Y227 616 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 GFYI3L273 518 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 PLPP2O43688 288 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 KLK1P06870 262 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 ASGR2P07307 311 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 SPI1P17947 270 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 HTR2AP28223 471 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 HSD17B2P37059 387 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 NPBWR1P48145 328 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 EIF2S3LQ2VIR3 472 aaKnown RBP8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 RAB12Q6IQ22 244 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 C16orf59Q7L2K0 433 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 SZRD1Q7Z422 152 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 TMPRSS11BQ86T26 416 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 SKA3Q8IX90 412 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 APCDD1Q8J025 514 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 TBC1D19Q8N5T2 526 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 SETD7Q8WTS6 366 aaKnown RBP8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 ZNF471Q9BX82 626 aaPredicted RBP8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 PLEKHA1Q9HB21 404 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 HINT3Q9NQE9 182 aaKnown RBP8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 KLHL42Q9P2K6 505 aa8.77□□□□□ -1.01
SYNPO2-204ENST00000448416 MBLAC1A4D2B0 266 aaPredicted RBP8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 C1orf196B1AJZ1 125 aa8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 J3QLW9 94 aa8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 CACNB4O00305 520 aaPredicted RBP8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 IGLV3-27P01718 113 aa8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 IL3P08700 152 aa8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 VSIG10L2P0DP72 767 aa8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 ZNF19P17023 458 aa8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 BDKRB2P30411 391 aa8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 DCTDP32321 178 aa8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 CSF2RBP32927 897 aa8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 BUD31P41223 144 aaPredicted RBP8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 CTSOP43234 321 aaPredicted RBP8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 PSMD4P55036 377 aaKnown RBP8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 MANFP55145 182 aaKnown RBP8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 ARF5P84085 180 aa8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 TAF10Q12962 218 aa8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 ECH1Q13011 328 aa8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 TSTA3Q13630 321 aaPredicted RBP8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 VGLL4Q14135 290 aa8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 SYPL1Q16563 259 aa8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 UBE2NLQ5JXB2 153 aa8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 FAM71E1Q6IPT2 247 aa8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 ZNF425Q6IV72 752 aa8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 MED27Q6P2C8 311 aa8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 MMP21Q8N119 569 aa8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 C17orf47Q8NEP4 570 aa8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 XAGE5Q8WWM1 108 aa8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 OSTF1Q92882 214 aa8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 NEURL3Q96EH8 262 aa8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 PRRC1Q96M27 445 aa8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 TLNRD1Q9H1K6 362 aa8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 FCF1Q9Y324 198 aaKnown RBP8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 TRIP12Q14669 1992 aaPredicted RBP8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 ZC3H12DA2A288 527 aaKnown RBP8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 NEDD8-MDP1E9PL57 170 aa8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 PPIAP62937 165 aaKnown RBP8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 IRF5Q13568 498 aa8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 SGCAQ16586 387 aa8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 RNF212Q495C1 297 aa8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 AGTRAPQ6RW13 159 aa8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 RPTNQ6XPR3 784 aa8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 C6orf120Q7Z4R8 191 aa8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 PXKQ7Z7A4 578 aa8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 STX12Q86Y82 276 aa8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 ZFPM2Q8WW38 1151 aa8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 PFDN5Q99471 154 aa8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 WDR77Q9BQA1 342 aaPredicted RBP8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 CPEB1Q9BZB8 566 aaKnown RBP8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 RSPH9Q9H1X1 276 aaPredicted RBP8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 ADARB2Q9NS39 739 aaKnown RBP8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 A0A0D9SG52 128 aa8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 M0QZQ0 153 aa8.76□□□□□ -1.01
SYNPO2-204ENST00000448416 EIF4E2O60573 245 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms