RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 FGF22Q9HCT0 170 aa11.98□□□□□ -0.49
SHC1-210ENST00000448116 TMEM74BQ9NUR3 256 aa11.98□□□□□ -0.49
SHC1-210ENST00000448116 LYARQ9NX58 379 aaKnown RBP11.98□□□□□ -0.49
SHC1-210ENST00000448116 KLF4O43474 513 aa11.98□□□□□ -0.49
SHC1-210ENST00000448116 HLA-DQB1P01920 261 aa11.98□□□□□ -0.49
SHC1-210ENST00000448116 SLC35G6P0C7Q6 338 aa11.98□□□□□ -0.49
SHC1-210ENST00000448116 ZNF136P52737 540 aa11.98□□□□□ -0.49
SHC1-210ENST00000448116 NTRK2Q16620 822 aa11.98□□□□□ -0.49
SHC1-210ENST00000448116 HBMQ6B0K9 141 aa11.98□□□□□ -0.49
SHC1-210ENST00000448116 ADGRD2Q7Z7M1 963 aa11.98□□□□□ -0.49
SHC1-210ENST00000448116 C17orf47Q8NEP4 570 aa11.98□□□□□ -0.49
SHC1-210ENST00000448116 OR8H1Q8NGG4 311 aa11.98□□□□□ -0.49
SHC1-210ENST00000448116 OR5M3Q8NGP4 307 aa11.98□□□□□ -0.49
SHC1-210ENST00000448116 TRMT10AQ8TBZ6 339 aaKnown RBP11.98□□□□□ -0.49
SHC1-210ENST00000448116 SLC17A9Q9BYT1 436 aa11.98□□□□□ -0.49
SHC1-210ENST00000448116 SRMSQ9H3Y6 488 aa11.98□□□□□ -0.49
SHC1-210ENST00000448116 TBC1D29Q9UFV1 150 aa11.98□□□□□ -0.49
SHC1-210ENST00000448116 SLC9B1P1A6NJY1 282 aa11.97□□□□□ -0.49
SHC1-210ENST00000448116 FABP7O15540 132 aa11.97□□□□□ -0.49
SHC1-210ENST00000448116 MT-ND5P03915 603 aa11.97□□□□□ -0.49
SHC1-210ENST00000448116 FAM157BP0CG42 384 aa11.97□□□□□ -0.49
SHC1-210ENST00000448116 HTR2AP28223 471 aa11.97□□□□□ -0.49
SHC1-210ENST00000448116 TLX1P31314 330 aaPredicted RBP11.97□□□□□ -0.49
SHC1-210ENST00000448116 PITPNBP48739 271 aa11.97□□□□□ -0.49
SHC1-210ENST00000448116 MTNR1BP49286 362 aa11.97□□□□□ -0.49
SHC1-210ENST00000448116 FOXK2Q01167 660 aa11.97□□□□□ -0.49
SHC1-210ENST00000448116 RUNX2Q13950 521 aa11.97□□□□□ -0.49
SHC1-210ENST00000448116 EXOSC7Q15024 291 aaKnown RBP11.97□□□□□ -0.49
SHC1-210ENST00000448116 C2orf27AQ580R0 203 aa11.97□□□□□ -0.49
SHC1-210ENST00000448116 SFXN4Q6P4A7 337 aa11.97□□□□□ -0.49
SHC1-210ENST00000448116 YAF2Q8IY57 180 aa11.97□□□□□ -0.49
SHC1-210ENST00000448116 ABHD4Q8TB40 342 aa11.97□□□□□ -0.49
SHC1-210ENST00000448116 ACOT12Q8WYK0 555 aa11.97□□□□□ -0.49
SHC1-210ENST00000448116 PTP4A1Q93096 173 aa11.97□□□□□ -0.49
SHC1-210ENST00000448116 ZC3HAV1LQ96H79 300 aaKnown RBP11.97□□□□□ -0.49
SHC1-210ENST00000448116 ABHD1Q96SE0 405 aa11.97□□□□□ -0.49
SHC1-210ENST00000448116 TEAD3Q99594 435 aa11.97□□□□□ -0.49
SHC1-210ENST00000448116 KCNJ15Q99712 375 aa11.97□□□□□ -0.49
SHC1-210ENST00000448116 TIMM29Q9BSF4 260 aa11.97□□□□□ -0.49
SHC1-210ENST00000448116 PFDN2Q9UHV9 154 aa11.97□□□□□ -0.49
SHC1-210ENST00000448116 LOC105369274A0A096LPK9 316 aa11.97□□□□□ -0.49
SHC1-210ENST00000448116 PRICKLE3O43900 615 aaPredicted RBP11.97□□□□□ -0.49
SHC1-210ENST00000448116 PPP1R3DO95685 299 aa11.97□□□□□ -0.49
SHC1-210ENST00000448116 TFPIP10646 304 aa11.97□□□□□ -0.49
SHC1-210ENST00000448116 F8A1P23610 371 aa11.97□□□□□ -0.49
SHC1-210ENST00000448116 FXYD6P3P58550 94 aa11.97□□□□□ -0.49
SHC1-210ENST00000448116 RUNX3Q13761 415 aa11.97□□□□□ -0.49
SHC1-210ENST00000448116 CRMP1Q14194 572 aa11.97□□□□□ -0.49
SHC1-210ENST00000448116 ESPNLQ6ZVH7 1005 aa11.97□□□□□ -0.49
SHC1-210ENST00000448116 LRRC28Q86X40 367 aaPredicted RBP11.97□□□□□ -0.49
SHC1-210ENST00000448116 PLCZ1Q86YW0 608 aa11.97□□□□□ -0.49
SHC1-210ENST00000448116 OR4N4Q8N0Y3 316 aa11.97□□□□□ -0.49
SHC1-210ENST00000448116 LRRC17Q8N6Y2 441 aa11.97□□□□□ -0.49
SHC1-210ENST00000448116 OR4C6Q8NH72 309 aa11.97□□□□□ -0.49
SHC1-210ENST00000448116 CCL4L1Q8NHW4 92 aa11.97□□□□□ -0.49
SHC1-210ENST00000448116 BPIFA2Q96DR5 249 aa11.97□□□□□ -0.49
SHC1-210ENST00000448116 PRSS27Q9BQR3 290 aa11.97□□□□□ -0.49
SHC1-210ENST00000448116 CLDND1Q9NY35 253 aa11.97□□□□□ -0.49
SHC1-210ENST00000448116 NKIRAS2Q9NYR9 191 aa11.97□□□□□ -0.49
SHC1-210ENST00000448116 COLEC10Q9Y6Z7 277 aa11.97□□□□□ -0.49
SHC1-210ENST00000448116 A0A0A6YYJ9 748 aa11.96□□□□□ -0.49
SHC1-210ENST00000448116 SGK494L7N484 410 aa11.96□□□□□ -0.49
SHC1-210ENST00000448116 CFL1P23528 166 aaKnown RBP11.96□□□□□ -0.49
SHC1-210ENST00000448116 B2MP61769 119 aa11.96□□□□□ -0.49
SHC1-210ENST00000448116 C1orf53Q5VUE5 145 aa11.96□□□□□ -0.49
SHC1-210ENST00000448116 BICRALQ6AI39 1079 aa11.96□□□□□ -0.49
SHC1-210ENST00000448116 ENPP7Q6UWV6 458 aa11.96□□□□□ -0.49
SHC1-210ENST00000448116 TRILQ7L0X0 811 aa11.96□□□□□ -0.49
SHC1-210ENST00000448116 ARL14Q8N4G2 192 aa11.96□□□□□ -0.49
SHC1-210ENST00000448116 BADQ92934 168 aa11.96□□□□□ -0.49
SHC1-210ENST00000448116 GAL3ST3Q96A11 431 aa11.96□□□□□ -0.49
SHC1-210ENST00000448116 C10orf90Q96M02 699 aa11.96□□□□□ -0.49
SHC1-210ENST00000448116 APOOQ9BUR5 198 aa11.96□□□□□ -0.49
SHC1-210ENST00000448116 NIPAL2Q9H841 368 aa11.96□□□□□ -0.49
SHC1-210ENST00000448116 CYSLTR2Q9NS75 346 aa11.96□□□□□ -0.49
SHC1-210ENST00000448116 RIIAD1A6NNX1 92 aa11.96□□□□□ -0.49
SHC1-210ENST00000448116 RCBTB2O95199 551 aa11.96□□□□□ -0.49
SHC1-210ENST00000448116 DHFRP00374 187 aa11.96□□□□□ -0.49
SHC1-210ENST00000448116 SYPP08247 313 aa11.96□□□□□ -0.49
SHC1-210ENST00000448116 POLR2CP19387 275 aaPredicted RBP11.96□□□□□ -0.49
SHC1-210ENST00000448116 BMP8BP34820 402 aa11.96□□□□□ -0.49
SHC1-210ENST00000448116 IGFALSP35858 605 aa11.96□□□□□ -0.49
SHC1-210ENST00000448116 TP53I3Q53FA7 332 aa11.96□□□□□ -0.49
SHC1-210ENST00000448116 ACSM3Q53FZ2 586 aa11.96□□□□□ -0.49
SHC1-210ENST00000448116 EIPR1Q53HC9 387 aa11.96□□□□□ -0.49
SHC1-210ENST00000448116 ANKRD54Q6NXT1 300 aa11.96□□□□□ -0.49
SHC1-210ENST00000448116 BMP8AQ7Z5Y6 402 aa11.96□□□□□ -0.49
SHC1-210ENST00000448116 BEST4Q8NFU0 473 aa11.96□□□□□ -0.49
SHC1-210ENST00000448116 CDHR4A6H8M9 788 aa11.96□□□□□ -0.5
SHC1-210ENST00000448116 B3GALT2O43825 422 aa11.96□□□□□ -0.5
SHC1-210ENST00000448116 RNGTTO60942 597 aaKnown RBP11.96□□□□□ -0.5
SHC1-210ENST00000448116 FZD7O75084 574 aa11.96□□□□□ -0.5
SHC1-210ENST00000448116 SERPINI2O75830 405 aa11.96□□□□□ -0.5
SHC1-210ENST00000448116 GABRA3P34903 492 aa11.96□□□□□ -0.5
SHC1-210ENST00000448116 TNFRSF17Q02223 184 aa11.96□□□□□ -0.5
SHC1-210ENST00000448116 ACSM1Q08AH1 577 aa11.96□□□□□ -0.5
SHC1-210ENST00000448116 GALEQ14376 348 aa11.96□□□□□ -0.5
SHC1-210ENST00000448116 ARHGAP11BQ3KRB8 267 aa11.96□□□□□ -0.5
SHC1-210ENST00000448116 DCST2Q5T1A1 773 aa11.96□□□□□ -0.5
SHC1-210ENST00000448116 ZNF425Q6IV72 752 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms