RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 KCTD12Q96CX2 325 aaKnown RBP12.17□□□□□ -0.46
DDX56-206ENST00000446987 ANKRD19PQ9H560 264 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 LATS2Q9NRM7 1088 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 TSR3Q9UJK0 312 aaKnown RBP12.17□□□□□ -0.46
DDX56-206ENST00000446987 ERVK-19Q9WJR5 959 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 U3KQA8 63 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 TRBV5-4A0A0C4DH59 114 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 MCRIP1C9JLW8 97 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 TEX46H3BTG2 121 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 SUV39H1O43463 412 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 HEXAP06865 529 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 FOLR2P14207 255 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 GABRA1P14867 456 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 CDKN1CP49918 316 aaPredicted RBP12.17□□□□□ -0.46
DDX56-206ENST00000446987 CRISP1P54107 249 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 HNRNPKP61978 463 aaKnown RBP eCLIP12.17□□□□□ -0.46
DDX56-206ENST00000446987 DCDP81605 110 aaKnown RBP12.17□□□□□ -0.46
DDX56-206ENST00000446987 B4GALNT1Q00973 533 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 C1orf61Q13536 156 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 GK2Q14410 553 aaPredicted RBP12.17□□□□□ -0.46
DDX56-206ENST00000446987 PTGR1Q14914 329 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 TCEA2Q15560 299 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 GUCA2BQ16661 112 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 ST3GAL2Q16842 350 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 EIF2S3LQ2VIR3 472 aaKnown RBP12.17□□□□□ -0.46
DDX56-206ENST00000446987 RNF212Q495C1 297 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 TMEM91Q6ZNR0 172 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 USP53Q70EK8 1073 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 NRROSQ86YC3 692 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 PTOV1Q86YD1 416 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 SLITRK4Q8IW52 837 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 PIANPQ8IYJ0 282 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 LGI4Q8N135 537 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 ZNF565Q8N9K5 539 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 OR6P1Q8NGX9 317 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 ZNF285Q96NJ3 590 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 SLC6A13Q9NSD5 602 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 MARCH4Q9P2E8 410 aaPredicted RBP12.17□□□□□ -0.46
DDX56-206ENST00000446987 PLEKHM1Q9Y4G2 1056 aa12.17□□□□□ -0.46
DDX56-206ENST00000446987 DSPPQ9NZW4 1301 aa12.16□□□□□ -0.46
DDX56-206ENST00000446987 PIKFYVEQ9Y2I7 2098 aa12.16□□□□□ -0.46
DDX56-206ENST00000446987 TCRBV16S1A1N1A0A5B0 115 aa12.16□□□□□ -0.46
DDX56-206ENST00000446987 TMEM129A0AVI4 362 aa12.16□□□□□ -0.46
DDX56-206ENST00000446987 ANXA2P2A6NMY6 339 aa12.16□□□□□ -0.46
DDX56-206ENST00000446987 FLRT2O43155 660 aa12.16□□□□□ -0.46
DDX56-206ENST00000446987 CPN1P15169 458 aa12.16□□□□□ -0.46
DDX56-206ENST00000446987 CXCL2P19875 107 aa12.16□□□□□ -0.46
DDX56-206ENST00000446987 PVALBP20472 110 aaPredicted RBP12.16□□□□□ -0.46
DDX56-206ENST00000446987 S100A11P31949 105 aa12.16□□□□□ -0.46
DDX56-206ENST00000446987 LIMS1P48059 325 aa12.16□□□□□ -0.46
DDX56-206ENST00000446987 AGTR2P50052 363 aa12.16□□□□□ -0.46
DDX56-206ENST00000446987 MAZP56270 477 aaKnown RBP12.16□□□□□ -0.46
DDX56-206ENST00000446987 MC2RQ01718 297 aa12.16□□□□□ -0.46
DDX56-206ENST00000446987 NFATC2Q13469 925 aa12.16□□□□□ -0.46
DDX56-206ENST00000446987 HLXQ14774 488 aaPredicted RBP12.16□□□□□ -0.46
DDX56-206ENST00000446987 PRRT3Q5FWE3 981 aa12.16□□□□□ -0.46
DDX56-206ENST00000446987 GPRC6AQ5T6X5 926 aa12.16□□□□□ -0.46
DDX56-206ENST00000446987 ZDHHC20Q5W0Z9 365 aa12.16□□□□□ -0.46
DDX56-206ENST00000446987 ZNF547Q8IVP9 402 aa12.16□□□□□ -0.46
DDX56-206ENST00000446987 SFTPA2Q8IWL1 248 aa12.16□□□□□ -0.46
DDX56-206ENST00000446987 ARMC10Q8N2F6 343 aa12.16□□□□□ -0.46
DDX56-206ENST00000446987 SVBPQ8N300 66 aa12.16□□□□□ -0.46
DDX56-206ENST00000446987 DEFB124Q8NES8 71 aa12.16□□□□□ -0.46
DDX56-206ENST00000446987 OR5M3Q8NGP4 307 aa12.16□□□□□ -0.46
DDX56-206ENST00000446987 CDKN2AIPNLQ96HQ2 116 aa12.16□□□□□ -0.46
DDX56-206ENST00000446987 TMEM41AQ96HV5 264 aa12.16□□□□□ -0.46
DDX56-206ENST00000446987 PAPOLGQ9BWT3 736 aaKnown RBP12.16□□□□□ -0.46
DDX56-206ENST00000446987 NDUFAF4Q9P032 175 aa12.16□□□□□ -0.46
DDX56-206ENST00000446987 CORO2BQ9UQ03 480 aa12.16□□□□□ -0.46
DDX56-206ENST00000446987 CACNA1AO00555 2505 aa12.16□□□□□ -0.46
DDX56-206ENST00000446987 GOLGA4Q13439 2230 aaKnown RBP12.15□□□□□ -0.46
DDX56-206ENST00000446987 DCDC2BA2VCK2 349 aa12.15□□□□□ -0.46
DDX56-206ENST00000446987 PRR19A6NJB7 356 aa12.15□□□□□ -0.46
DDX56-206ENST00000446987 EFCAB7A8K855 629 aa12.15□□□□□ -0.46
DDX56-206ENST00000446987 CASKO14936 926 aa12.15□□□□□ -0.46
DDX56-206ENST00000446987 ENTPD6O75354 484 aa12.15□□□□□ -0.46
DDX56-206ENST00000446987 ATG12O94817 140 aa12.15□□□□□ -0.46
DDX56-206ENST00000446987 RAB36O95755 333 aa12.15□□□□□ -0.46
DDX56-206ENST00000446987 ZNF8P17098 575 aaPredicted RBP12.15□□□□□ -0.46
DDX56-206ENST00000446987 CSRP1P21291 193 aaKnown RBP12.15□□□□□ -0.46
DDX56-206ENST00000446987 PPIBP23284 216 aaKnown RBP12.15□□□□□ -0.46
DDX56-206ENST00000446987 MC4RP32245 332 aa12.15□□□□□ -0.46
DDX56-206ENST00000446987 ZP1P60852 638 aa12.15□□□□□ -0.46
DDX56-206ENST00000446987 ZNF155Q12901 538 aaPredicted RBP12.15□□□□□ -0.46
DDX56-206ENST00000446987 ABRAXAS2Q15018 415 aa12.15□□□□□ -0.46
DDX56-206ENST00000446987 PAN3Q58A45 887 aaKnown RBP12.15□□□□□ -0.46
DDX56-206ENST00000446987 AVPI1Q5T686 147 aa12.15□□□□□ -0.46
DDX56-206ENST00000446987 SLC22A10Q63ZE4 541 aa12.15□□□□□ -0.46
DDX56-206ENST00000446987 SLC6A19Q695T7 634 aa12.15□□□□□ -0.46
DDX56-206ENST00000446987 OR7E24Q6IFN5 339 aa12.15□□□□□ -0.46
DDX56-206ENST00000446987 PSAPL1Q6NUJ1 521 aa12.15□□□□□ -0.46
DDX56-206ENST00000446987 HAGHLQ6PII5 290 aaPredicted RBP12.15□□□□□ -0.46
DDX56-206ENST00000446987 RD3Q7Z3Z2 195 aa12.15□□□□□ -0.46
DDX56-206ENST00000446987 C11orf96Q7Z7L8 435 aa12.15□□□□□ -0.46
DDX56-206ENST00000446987 GPSM1Q86YR5 675 aa12.15□□□□□ -0.46
DDX56-206ENST00000446987 TBC1D19Q8N5T2 526 aa12.15□□□□□ -0.46
DDX56-206ENST00000446987 OR4C6Q8NH72 309 aa12.15□□□□□ -0.46
DDX56-206ENST00000446987 COQ8AQ8NI60 647 aa12.15□□□□□ -0.46
DDX56-206ENST00000446987 LMX1AQ8TE12 382 aa12.15□□□□□ -0.46
DDX56-206ENST00000446987 GTF3AQ92664 365 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms