RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 KLHDC8AQ8IYD2 350 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 ZNF454Q8N9F8 522 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 RELL2Q8NC24 303 aaPredicted RBP8.43□□□□□ -1.06
COPB1-202ENST00000439561 SDR9C7Q8NEX9 313 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 OR52E2Q8NGJ4 325 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 OR5J2Q8NH18 312 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 OR52I2Q8NH67 350 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 CDS1Q92903 461 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 SORCS2Q96PQ0 1159 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 ZNF559Q9BR84 538 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 SGPP1Q9BX95 441 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 HCAR1Q9BXC0 346 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 SLC46A2Q9BY10 475 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 KLHL31Q9H511 634 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 TCF7L1Q9HCS4 588 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 ISYNA1Q9NPH2 558 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 CALML5Q9NZT1 146 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 ATG4BQ9Y4P1 393 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 SLC22A31A6NKX4 558 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 CDC42EP2O14613 210 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 GOSR2O14653 212 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 NPC1O15118 1278 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 CASC3O15234 703 aaKnown RBP8.43□□□□□ -1.06
COPB1-202ENST00000439561 LATS1O95835 1130 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 IFNGP01579 166 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 ANKRD34CP0C6C1 535 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 C6P13671 934 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 MAGEB1P43366 347 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 OMPP47874 163 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 PDX1P52945 283 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 MFSD13AQ14CX5 517 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 AGERQ15109 404 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 AADACL4Q5VUY2 407 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 POGLUT1Q8NBL1 392 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 SETD7Q8WTS6 366 aaKnown RBP8.43□□□□□ -1.06
COPB1-202ENST00000439561 YIPF5Q969M3 257 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 DNAJA3Q96EY1 480 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 C12orf10Q9HB07 376 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 MRPS30Q9NP92 439 aaKnown RBP8.43□□□□□ -1.06
COPB1-202ENST00000439561 PTTG3PQ9NZH4 202 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 HRH3Q9Y5N1 445 aa8.43□□□□□ -1.06
COPB1-202ENST00000439561 LCMT2O60294 686 aaKnown RBP8.42□□□□□ -1.06
COPB1-202ENST00000439561 RCBTB2O95199 551 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 SERPINA3P01011 423 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 HLA-DQB1P01920 261 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 SOD2P04179 222 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 NT5EP21589 574 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 ERVK-25P63136 954 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 IRF5Q13568 498 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 BEX5Q5H9J7 111 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 ZC3H14Q6PJT7 736 aaKnown RBP8.42□□□□□ -1.06
COPB1-202ENST00000439561 NHLRC1Q6VVB1 395 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 TMEM150AQ86TG1 271 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 SLC16A11Q8NCK7 471 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 OR2T4Q8NH00 348 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 IRF7Q92985 503 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 KCTD12Q96CX2 325 aaKnown RBP8.42□□□□□ -1.06
COPB1-202ENST00000439561 S100A16Q96FQ6 103 aaKnown RBP8.42□□□□□ -1.06
COPB1-202ENST00000439561 HS6ST2Q96MM7 605 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 PCDHB16Q9NRJ7 776 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 KLHL9Q9P2J3 617 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 MED31Q9Y3C7 131 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 OTOFQ9HC10 1997 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 MEIKINA0A087WXM9 373 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 A0A1W2PQ45 241 aaPredicted RBP8.42□□□□□ -1.06
COPB1-202ENST00000439561 A0A1W2PQY0 241 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 EMC8O43402 210 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 CCR4P51679 360 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 TAS2R43P59537 309 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 SIM1P81133 766 aaPredicted RBP8.42□□□□□ -1.06
COPB1-202ENST00000439561 CAP1Q01518 475 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 GRM7Q14831 915 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 EOGTQ5NDL2 527 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 KIAA1324Q6UXG2 1013 aaKnown RBP8.42□□□□□ -1.06
COPB1-202ENST00000439561 HDDC3Q8N4P3 179 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 ARIH2OSQ8N7S6 290 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 COX18Q8N8Q8 333 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 ACOT4Q8N9L9 421 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 VN1R2Q8NFZ6 395 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 RSPO3Q9BXY4 272 aaPredicted RBP8.42□□□□□ -1.06
COPB1-202ENST00000439561 FN3KQ9H479 309 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 SIDT1Q9NXL6 827 aaKnown RBP8.42□□□□□ -1.06
COPB1-202ENST00000439561 ICKQ9UPZ9 632 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 GMFGO60234 142 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 FBXO45P0C2W1 286 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 FPR3P25089 353 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 MAT2AP31153 395 aaKnown RBP8.42□□□□□ -1.06
COPB1-202ENST00000439561 TEAD2Q15562 447 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 HEPHL1Q6MZM0 1159 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 NIPAL3Q6P499 406 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 LCTLQ6UWM7 567 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 Q6ZNB5 142 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 HTR3DQ70Z44 454 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 TMPRSS12Q86WS5 348 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 ESX1Q8N693 406 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 IL17RCQ8NAC3 791 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 HSD17B8Q92506 261 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 C1QTNF2Q9BXJ5 285 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 ZDHHC5Q9C0B5 715 aa8.42□□□□□ -1.06
COPB1-202ENST00000439561 CCDC86Q9H6F5 360 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms