RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 TDGQ13569 410 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 CCINQ13939 588 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 OR1Q1Q15612 314 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 GPR68Q15743 365 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 RPL13AP3Q6NVV1 102 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 ARL9Q6T311 187 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 TPRA1Q86W33 373 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 AMIGO1Q86WK6 493 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 OR10H4Q8NGA5 316 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 OR14C36Q8NHC7 312 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 GUCD1Q96NT3 240 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 NDC1Q9BTX1 674 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 PIGUQ9H490 435 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 FBRSQ9HAH7 460 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 ATP13A2Q9NQ11 1180 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 KLF15Q9UIH9 416 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 ZMIZ1Q9ULJ6 1067 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 RASD1Q9Y272 281 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 FAM86C2PA6NEL3 165 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 NOTOA8MTQ0 251 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 SMLR1H3BR10 107 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 TNFRSF10AO00220 468 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 AKR7A2O43488 359 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 OR2B3O76000 313 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 RCBTB2O95199 551 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 BMP7P18075 431 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 BTCP35070 178 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 PITPNBP48739 271 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 TAS2R43P59537 309 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 SGCGQ13326 291 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 CAMK2BQ13554 666 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 CCDC58Q4VC31 144 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 MRPL2Q5T653 305 aaKnown RBP15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 FAM27D1Q5T7N8 215 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 FHL5Q5TD97 284 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 TMEM92Q6UXU6 159 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 USP53Q70EK8 1073 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 CREB3L2Q70SY1 520 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 PXKQ7Z7A4 578 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 GPALPP1Q8IXQ4 340 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 SAMD12Q8N8I0 201 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 PTP4A1Q93096 173 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 SCARF2Q96GP6 870 aaPredicted RBP15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 SERINC2Q96SA4 455 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 COLEC10Q9Y6Z7 277 aa15.18■□□□□ 0.02
CLCNKA-203ENST00000439316 GOLGA4Q13439 2230 aaKnown RBP15.17■□□□□ 0.02
CLCNKA-203ENST00000439316 PRR23D1E9PI22 279 aaPredicted RBP15.17■□□□□ 0.02
CLCNKA-203ENST00000439316 SCAMP1O15126 338 aa15.17■□□□□ 0.02
CLCNKA-203ENST00000439316 PLRG1O43660 514 aaKnown RBP15.17■□□□□ 0.02
CLCNKA-203ENST00000439316 FMO6PO60774 539 aa15.17■□□□□ 0.02
CLCNKA-203ENST00000439316 REM1O75628 298 aa15.17■□□□□ 0.02
CLCNKA-203ENST00000439316 SC5DO75845 299 aa15.17■□□□□ 0.02
CLCNKA-203ENST00000439316 GKN3PP0CG01 181 aa15.17■□□□□ 0.02
CLCNKA-203ENST00000439316 PRR23D2P0DMB1 279 aaPredicted RBP15.17■□□□□ 0.02
CLCNKA-203ENST00000439316 SMIM10L1P0DMW3 83 aa15.17■□□□□ 0.02
CLCNKA-203ENST00000439316 NID1P14543 1247 aa15.17■□□□□ 0.02
CLCNKA-203ENST00000439316 IL9P15248 144 aa15.17■□□□□ 0.02
CLCNKA-203ENST00000439316 SLC2A5P22732 501 aa15.17■□□□□ 0.02
CLCNKA-203ENST00000439316 ACSL1P33121 698 aa15.17■□□□□ 0.02
CLCNKA-203ENST00000439316 OR10A3P58181 314 aa15.17■□□□□ 0.02
CLCNKA-203ENST00000439316 SIM1P81133 766 aaPredicted RBP15.17■□□□□ 0.02
CLCNKA-203ENST00000439316 E2F1Q01094 437 aa15.17■□□□□ 0.02
CLCNKA-203ENST00000439316 FOXK2Q01167 660 aa15.17■□□□□ 0.02
CLCNKA-203ENST00000439316 C19orf57Q0VDD7 668 aa15.17■□□□□ 0.02
CLCNKA-203ENST00000439316 MRPL28Q13084 256 aaKnown RBP15.17■□□□□ 0.02
CLCNKA-203ENST00000439316 KLHL12Q53G59 568 aa15.17■□□□□ 0.02
CLCNKA-203ENST00000439316 DCST2Q5T1A1 773 aa15.17■□□□□ 0.02
CLCNKA-203ENST00000439316 HACD4Q5VWC8 232 aa15.17■□□□□ 0.02
CLCNKA-203ENST00000439316 THSD4Q6ZMP0 1018 aa15.17■□□□□ 0.02
CLCNKA-203ENST00000439316 ASB18Q6ZVZ8 466 aa15.17■□□□□ 0.02
CLCNKA-203ENST00000439316 TMPRSS11FQ6ZWK6 438 aa15.17■□□□□ 0.02
CLCNKA-203ENST00000439316 OR4N5Q8IXE1 308 aa15.17■□□□□ 0.02
CLCNKA-203ENST00000439316 OR4E2Q8NGC2 313 aa15.17■□□□□ 0.02
CLCNKA-203ENST00000439316 LCN9Q8WX39 176 aa15.17■□□□□ 0.02
CLCNKA-203ENST00000439316 SNAPC3Q92966 411 aa15.17■□□□□ 0.02
CLCNKA-203ENST00000439316 FAM131CQ96AQ9 280 aa15.17■□□□□ 0.02
CLCNKA-203ENST00000439316 SIPA1Q96FS4 1042 aa15.17■□□□□ 0.02
CLCNKA-203ENST00000439316 SMIM10Q96HG1 83 aa15.17■□□□□ 0.02
CLCNKA-203ENST00000439316 TEAD3Q99594 435 aa15.17■□□□□ 0.02
CLCNKA-203ENST00000439316 APOOQ9BUR5 198 aa15.17■□□□□ 0.02
CLCNKA-203ENST00000439316 PRDM9Q9NQV7 894 aa15.17■□□□□ 0.02
CLCNKA-203ENST00000439316 SLC2A4RGQ9NR83 387 aa15.17■□□□□ 0.02
CLCNKA-203ENST00000439316 KCNE5Q9UJ90 142 aa15.17■□□□□ 0.02
CLCNKA-203ENST00000439316 C19orf53Q9UNZ5 99 aaPredicted RBP15.17■□□□□ 0.02
CLCNKA-203ENST00000439316 SATB2Q9UPW6 733 aa15.17■□□□□ 0.02
CLCNKA-203ENST00000439316 TMEM5Q9Y2B1 443 aa15.17■□□□□ 0.02
CLCNKA-203ENST00000439316 CACNG2Q9Y698 323 aa15.17■□□□□ 0.02
CLCNKA-203ENST00000439316 A0A1W2PQU0 124 aa15.16■□□□□ 0.02
CLCNKA-203ENST00000439316 CDHR4A6H8M9 788 aa15.16■□□□□ 0.02
CLCNKA-203ENST00000439316 SLC35G6P0C7Q6 338 aa15.16■□□□□ 0.02
CLCNKA-203ENST00000439316 CPMP14384 443 aa15.16■□□□□ 0.02
CLCNKA-203ENST00000439316 AHCYP23526 432 aa15.16■□□□□ 0.02
CLCNKA-203ENST00000439316 NDUFS1P28331 727 aa15.16■□□□□ 0.02
CLCNKA-203ENST00000439316 ADPRHP54922 357 aa15.16■□□□□ 0.02
CLCNKA-203ENST00000439316 ZNF85Q03923 595 aa15.16■□□□□ 0.02
CLCNKA-203ENST00000439316 RUNX2Q13950 521 aa15.16■□□□□ 0.02
CLCNKA-203ENST00000439316 TRMT12Q53H54 448 aaKnown RBP15.16■□□□□ 0.02
CLCNKA-203ENST00000439316 ZNF767PQ75MW2 155 aa15.16■□□□□ 0.02
CLCNKA-203ENST00000439316 GPR135Q8IZ08 494 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms