RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 IGFL3Q6UXB1 125 aa18.86■□□□□ 0.61
CHD3-204ENST00000439235 AMIGO2Q86SJ2 522 aa18.86■□□□□ 0.61
CHD3-204ENST00000439235 LILRA2Q8N149 483 aa18.86■□□□□ 0.61
CHD3-204ENST00000439235 CADM2Q8N3J6 435 aa18.86■□□□□ 0.61
CHD3-204ENST00000439235 FADS6Q8N9I5 356 aa18.86■□□□□ 0.61
CHD3-204ENST00000439235 PIK3C3Q8NEB9 887 aa18.86■□□□□ 0.61
CHD3-204ENST00000439235 OR2M3Q8NG83 312 aa18.86■□□□□ 0.61
CHD3-204ENST00000439235 ADAMTS16Q8TE57 1224 aa18.86■□□□□ 0.61
CHD3-204ENST00000439235 SCMH1Q96GD3 660 aa18.86■□□□□ 0.61
CHD3-204ENST00000439235 DSN1Q9H410 356 aa18.86■□□□□ 0.61
CHD3-204ENST00000439235 CTPS2Q9NRF8 586 aa18.86■□□□□ 0.61
CHD3-204ENST00000439235 MED11Q9P086 117 aa18.86■□□□□ 0.61
CHD3-204ENST00000439235 APC2O95996 2303 aa18.85■□□□□ 0.61
CHD3-204ENST00000439235 DOCK10Q96BY6 2186 aa18.85■□□□□ 0.61
CHD3-204ENST00000439235 TRAV17A0A0B4J275 112 aa18.85■□□□□ 0.61
CHD3-204ENST00000439235 FFAR1O14842 300 aa18.85■□□□□ 0.61
CHD3-204ENST00000439235 GMFGO60234 142 aa18.85■□□□□ 0.61
CHD3-204ENST00000439235 E2F6O75461 281 aa18.85■□□□□ 0.61
CHD3-204ENST00000439235 PRSS23O95084 383 aa18.85■□□□□ 0.61
CHD3-204ENST00000439235 GADD45GO95257 159 aa18.85■□□□□ 0.61
CHD3-204ENST00000439235 IDH2P48735 452 aaKnown RBP18.85■□□□□ 0.61
CHD3-204ENST00000439235 ZNF41P51814 821 aaPredicted RBP18.85■□□□□ 0.61
CHD3-204ENST00000439235 CDH12P55289 794 aa18.85■□□□□ 0.61
CHD3-204ENST00000439235 GPR85P60893 370 aa18.85■□□□□ 0.61
CHD3-204ENST00000439235 SLC34A1Q06495 639 aa18.85■□□□□ 0.61
CHD3-204ENST00000439235 GANABQ14697 944 aaKnown RBP18.85■□□□□ 0.61
CHD3-204ENST00000439235 ZNF766Q5HY98 468 aa18.85■□□□□ 0.61
CHD3-204ENST00000439235 COLEC12Q5KU26 742 aa18.85■□□□□ 0.61
CHD3-204ENST00000439235 TIGD3Q6B0B8 471 aa18.85■□□□□ 0.61
CHD3-204ENST00000439235 HMBOX1Q6NT76 420 aa18.85■□□□□ 0.61
CHD3-204ENST00000439235 WDSUB1Q8N9V3 476 aa18.85■□□□□ 0.61
CHD3-204ENST00000439235 OR2M7Q8NG81 312 aa18.85■□□□□ 0.61
CHD3-204ENST00000439235 GPR119Q8TDV5 335 aa18.85■□□□□ 0.61
CHD3-204ENST00000439235 TMEM234Q8WY98 164 aa18.85■□□□□ 0.61
CHD3-204ENST00000439235 SLC41A3Q96GZ6 507 aa18.85■□□□□ 0.61
CHD3-204ENST00000439235 DHRS1Q96LJ7 313 aa18.85■□□□□ 0.61
CHD3-204ENST00000439235 JSRP1Q96MG2 331 aaPredicted RBP18.85■□□□□ 0.61
CHD3-204ENST00000439235 PRR14Q9BWN1 585 aa18.85■□□□□ 0.61
CHD3-204ENST00000439235 ANKRD19PQ9H560 264 aa18.85■□□□□ 0.61
CHD3-204ENST00000439235 KLHL1Q9NR64 748 aa18.85■□□□□ 0.61
CHD3-204ENST00000439235 TAS2R10Q9NYW0 307 aa18.85■□□□□ 0.61
CHD3-204ENST00000439235 RHCGQ9UBD6 479 aa18.85■□□□□ 0.61
CHD3-204ENST00000439235 NTNG1Q9Y2I2 539 aa18.85■□□□□ 0.61
CHD3-204ENST00000439235 SAMHD1Q9Y3Z3 626 aaKnown RBP18.85■□□□□ 0.61
CHD3-204ENST00000439235 PCDHGB6Q9Y5F9 930 aa18.85■□□□□ 0.61
CHD3-204ENST00000439235 A0A0B4J2E0 115 aa18.84■□□□□ 0.61
CHD3-204ENST00000439235 A0A0G2JMM0 328 aa18.84■□□□□ 0.61
CHD3-204ENST00000439235 A0A1B0GWA3 101 aa18.84■□□□□ 0.61
CHD3-204ENST00000439235 A0A1B0GX12 115 aa18.84■□□□□ 0.61
CHD3-204ENST00000439235 A0A1W2PPB8 328 aa18.84■□□□□ 0.61
CHD3-204ENST00000439235 A0A1W2PRS3 328 aa18.84■□□□□ 0.61
CHD3-204ENST00000439235 KIR3DP1A8MWS1 328 aa18.84■□□□□ 0.61
CHD3-204ENST00000439235 KLRC4-KLRK1H3BQV0 150 aa18.84■□□□□ 0.61
CHD3-204ENST00000439235 TNFRSF11BO00300 401 aa18.84■□□□□ 0.61
CHD3-204ENST00000439235 PEX1O43933 1283 aa18.84■□□□□ 0.61
CHD3-204ENST00000439235 GP1BBP13224 206 aa18.84■□□□□ 0.61
CHD3-204ENST00000439235 TRAM2Q15035 370 aa18.84■□□□□ 0.61
CHD3-204ENST00000439235 QPRTQ15274 297 aa18.84■□□□□ 0.61
CHD3-204ENST00000439235 SWT1Q5T5J6 900 aaKnown RBP18.84■□□□□ 0.61
CHD3-204ENST00000439235 FBXW10Q5XX13 1052 aa18.84■□□□□ 0.61
CHD3-204ENST00000439235 ULK3Q6PHR2 472 aa18.84■□□□□ 0.61
CHD3-204ENST00000439235 DNAJA4Q8WW22 397 aaPredicted RBP18.84■□□□□ 0.61
CHD3-204ENST00000439235 ST8SIA1Q92185 356 aa18.84■□□□□ 0.61
CHD3-204ENST00000439235 EXTL1Q92935 676 aa18.84■□□□□ 0.61
CHD3-204ENST00000439235 EPYCQ99645 322 aa18.84■□□□□ 0.61
CHD3-204ENST00000439235 HES7Q9BYE0 225 aa18.84■□□□□ 0.61
CHD3-204ENST00000439235 SEMA6AQ9H2E6 1030 aa18.84■□□□□ 0.61
CHD3-204ENST00000439235 RASSF4Q9H2L5 321 aa18.84■□□□□ 0.61
CHD3-204ENST00000439235 NMNAT1Q9HAN9 279 aaPredicted RBP18.84■□□□□ 0.61
CHD3-204ENST00000439235 ZFP64Q9NPA5 681 aa18.84■□□□□ 0.61
CHD3-204ENST00000439235 DEPPQ9NTK1 212 aa18.84■□□□□ 0.61
CHD3-204ENST00000439235 NKX1-2Q9UD57 310 aaPredicted RBP18.84■□□□□ 0.61
CHD3-204ENST00000439235 HRH3Q9Y5N1 445 aa18.84■□□□□ 0.61
CHD3-204ENST00000439235 BAHCC1Q9P281 2608 aa18.83■□□□□ 0.61
CHD3-204ENST00000439235 A0A087WZY1 265 aa18.83■□□□□ 0.6
CHD3-204ENST00000439235 A0A1W2PRQ8 180 aa18.83■□□□□ 0.6
CHD3-204ENST00000439235 CHP2O43745 196 aa18.83■□□□□ 0.6
CHD3-204ENST00000439235 CBR3O75828 277 aa18.83■□□□□ 0.6
CHD3-204ENST00000439235 DNAJA1P31689 397 aaKnown RBP18.83■□□□□ 0.6
CHD3-204ENST00000439235 SLC1A3P43003 542 aa18.83■□□□□ 0.6
CHD3-204ENST00000439235 ARHGDIAP52565 204 aa18.83■□□□□ 0.6
CHD3-204ENST00000439235 SESN3P58005 492 aa18.83■□□□□ 0.6
CHD3-204ENST00000439235 DGCR6Q14129 220 aa18.83■□□□□ 0.6
CHD3-204ENST00000439235 INPP5JQ15735 1006 aaPredicted RBP18.83■□□□□ 0.6
CHD3-204ENST00000439235 ALG10BQ5I7T1 473 aa18.83■□□□□ 0.6
CHD3-204ENST00000439235 FGD3Q5JSP0 725 aa18.83■□□□□ 0.6
CHD3-204ENST00000439235 GDF7Q7Z4P5 450 aa18.83■□□□□ 0.6
CHD3-204ENST00000439235 GALNTL5Q7Z4T8 443 aa18.83■□□□□ 0.6
CHD3-204ENST00000439235 TSPYL5Q86VY4 417 aaPredicted RBP18.83■□□□□ 0.6
CHD3-204ENST00000439235 SULF2Q8IWU5 870 aa18.83■□□□□ 0.6
CHD3-204ENST00000439235 FAM98AQ8NCA5 519 aaKnown RBP18.83■□□□□ 0.6
CHD3-204ENST00000439235 ICA1LQ8NDH6 482 aa18.83■□□□□ 0.6
CHD3-204ENST00000439235 CATSPER1Q8NEC5 780 aa18.83■□□□□ 0.6
CHD3-204ENST00000439235 C1GALT1C1Q96EU7 318 aa18.83■□□□□ 0.6
CHD3-204ENST00000439235 TUBA8Q9NY65 449 aaPredicted RBP18.83■□□□□ 0.6
CHD3-204ENST00000439235 STOML1Q9UBI4 398 aa18.83■□□□□ 0.6
CHD3-204ENST00000439235 B4GALT7Q9UBV7 327 aa18.83■□□□□ 0.6
CHD3-204ENST00000439235 FBXL2Q9UKC9 423 aa18.83■□□□□ 0.6
CHD3-204ENST00000439235 SLC7A7Q9UM01 511 aa18.83■□□□□ 0.6
CHD3-204ENST00000439235 LYVE1Q9Y5Y7 322 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms