RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 ADAM19Q9H013 955 aa6.93□□□□□ -1.3
VPS50-204ENST00000438395 OR10A4Q9H209 315 aa6.93□□□□□ -1.3
VPS50-204ENST00000438395 DUSP22Q9NRW4 184 aa6.93□□□□□ -1.3
VPS50-204ENST00000438395 GIN1Q9NXP7 522 aa6.93□□□□□ -1.3
VPS50-204ENST00000438395 KLHL13Q9P2N7 655 aa6.93□□□□□ -1.3
VPS50-204ENST00000438395 BAIAP2L1Q9UHR4 511 aa6.93□□□□□ -1.3
VPS50-204ENST00000438395 PTGDR2Q9Y5Y4 395 aa6.93□□□□□ -1.3
VPS50-204ENST00000438395 MED12LQ86YW9 2145 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 A0A0J9YW62 118 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 A0A1W2PP18 115 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 INAFM1C9JVW0 142 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 PIP5K1BO14986 540 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 SCAMP2O15127 329 aaKnown RBP6.92□□□□□ -1.3
VPS50-204ENST00000438395 TBX19O60806 448 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 TRIM13O60858 407 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 PRKD3O94806 890 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 HMGN2P05204 90 aaKnown RBP6.92□□□□□ -1.3
VPS50-204ENST00000438395 THBDP07204 575 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 CD3EP07766 207 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 UBL4AP11441 157 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 BCKDHAP12694 445 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 IL11P20809 199 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 PDE7AQ13946 482 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 P2RY6Q15077 328 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 CD226Q15762 336 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 STK11Q15831 433 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 CTU2Q2VPK5 515 aaKnown RBP6.92□□□□□ -1.3
VPS50-204ENST00000438395 LSM12Q3MHD2 195 aaKnown RBP6.92□□□□□ -1.3
VPS50-204ENST00000438395 ZNF385BQ569K4 471 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 KANK2Q63ZY3 851 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 CDC73Q6P1J9 531 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 SH2D5Q6ZV89 423 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 FCRLAQ7L513 359 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 MTERF4Q7Z6M4 381 aaKnown RBP6.92□□□□□ -1.3
VPS50-204ENST00000438395 C10orf107Q8IVU9 208 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 GSPT2Q8IYD1 628 aaKnown RBP6.92□□□□□ -1.3
VPS50-204ENST00000438395 CIARTQ8N365 385 aaPredicted RBP6.92□□□□□ -1.3
VPS50-204ENST00000438395 SLC43A2Q8N370 569 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 NATD1Q8N6N6 113 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 BANPQ8N9N5 519 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 TOR1AIP2Q8NFQ8 470 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 RFWD2Q8NHY2 731 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 PPP1R14CQ8TAE6 165 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 AGR3Q8TD06 166 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 RNF128Q8TEB7 428 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 MZB1Q8WU39 189 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 ABHD3Q8WU67 409 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 TWIST2Q8WVJ9 160 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 ROBO4Q8WZ75 1007 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 CDS1Q92903 461 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 FBXW5Q969U6 566 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 MOAP1Q96BY2 351 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 MUCL1Q96DR8 90 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 FAM120BQ96EK7 910 aaKnown RBP6.92□□□□□ -1.3
VPS50-204ENST00000438395 MARK4Q96L34 752 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 HS6ST2Q96MM7 605 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 STACQ99469 402 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 ACTRT3Q9BYD9 372 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 POTEKPQ9BYX7 375 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 GP6Q9HCN6 339 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 TNFRSF12AQ9NP84 129 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 FAIMQ9NVQ4 179 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 NTMQ9P121 344 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 KLHL9Q9P2J3 617 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 LAMP3Q9UQV4 416 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 CARD8Q9Y2G2 431 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 CCL27Q9Y4X3 112 aa6.92□□□□□ -1.3
VPS50-204ENST00000438395 TLDC2A0PJX2 215 aa6.91□□□□□ -1.3
VPS50-204ENST00000438395 NPIPB8E9PQR5 432 aa6.91□□□□□ -1.3
VPS50-204ENST00000438395 ZNF195O14628 629 aa6.91□□□□□ -1.3
VPS50-204ENST00000438395 LSM1O15116 133 aaKnown RBP6.91□□□□□ -1.3
VPS50-204ENST00000438395 KLF4O43474 513 aa6.91□□□□□ -1.3
VPS50-204ENST00000438395 PEX11AO75192 247 aa6.91□□□□□ -1.3
VPS50-204ENST00000438395 LYPLA1O75608 230 aaPredicted RBP6.91□□□□□ -1.3
VPS50-204ENST00000438395 CYP7B1O75881 506 aa6.91□□□□□ -1.3
VPS50-204ENST00000438395 RPLP1P05386 114 aaKnown RBP6.91□□□□□ -1.3
VPS50-204ENST00000438395 CCT3P49368 545 aaKnown RBP6.91□□□□□ -1.3
VPS50-204ENST00000438395 P2RX1P51575 399 aa6.91□□□□□ -1.3
VPS50-204ENST00000438395 ZNF117Q03924 483 aa6.91□□□□□ -1.3
VPS50-204ENST00000438395 DMTNQ08495 405 aa6.91□□□□□ -1.3
VPS50-204ENST00000438395 ZNF844Q08AG5 666 aa6.91□□□□□ -1.3
VPS50-204ENST00000438395 IFFO1Q0D2I5 559 aa6.91□□□□□ -1.3
VPS50-204ENST00000438395 SELENBP1Q13228 472 aa6.91□□□□□ -1.3
VPS50-204ENST00000438395 KIAA0040Q15053 153 aa6.91□□□□□ -1.3
VPS50-204ENST00000438395 TMEM176BQ3YBM2 270 aaPredicted RBP6.91□□□□□ -1.3
VPS50-204ENST00000438395 RFTN2Q52LD8 501 aaPredicted RBP6.91□□□□□ -1.3
VPS50-204ENST00000438395 DCST2Q5T1A1 773 aa6.91□□□□□ -1.3
VPS50-204ENST00000438395 C3orf33Q6P1S2 294 aa6.91□□□□□ -1.3
VPS50-204ENST00000438395 TFAP2EQ6VUC0 442 aa6.91□□□□□ -1.3
VPS50-204ENST00000438395 RNF165Q6ZSG1 346 aa6.91□□□□□ -1.3
VPS50-204ENST00000438395 SSX8Q7RTT4 187 aa6.91□□□□□ -1.3
VPS50-204ENST00000438395 ZAR1Q86SH2 424 aa6.91□□□□□ -1.3
VPS50-204ENST00000438395 TDRPQ86YL5 185 aa6.91□□□□□ -1.3
VPS50-204ENST00000438395 ZNF100Q8IYN0 542 aa6.91□□□□□ -1.3
VPS50-204ENST00000438395 FNDC5Q8NAU1 212 aa6.91□□□□□ -1.3
VPS50-204ENST00000438395 OR7A2PQ8NGA2 310 aa6.91□□□□□ -1.3
VPS50-204ENST00000438395 OR2T11Q8NH01 316 aa6.91□□□□□ -1.3
VPS50-204ENST00000438395 FBXO27Q8NI29 283 aa6.91□□□□□ -1.3
VPS50-204ENST00000438395 SFXN5Q8TD22 340 aa6.91□□□□□ -1.3
VPS50-204ENST00000438395 EPS8L3Q8TE67 593 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms