RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 EPS8Q12929 822 aa13.53□□□□□ -0.24
GARNL3-204ENST00000429629 ZNF836Q6ZNA1 936 aa13.53□□□□□ -0.24
GARNL3-204ENST00000429629 RBM15BQ8NDT2 890 aaKnown RBP13.53□□□□□ -0.24
GARNL3-204ENST00000429629 OR52E4Q8NGH9 312 aa13.53□□□□□ -0.24
GARNL3-204ENST00000429629 ZPLD1Q8TCW7 415 aa13.53□□□□□ -0.24
GARNL3-204ENST00000429629 SFXN2Q96NB2 322 aa13.53□□□□□ -0.24
GARNL3-204ENST00000429629 RSPO3Q9BXY4 272 aaPredicted RBP13.53□□□□□ -0.24
GARNL3-204ENST00000429629 TAS2R1Q9NYW7 299 aa13.53□□□□□ -0.24
GARNL3-204ENST00000429629 SPRR3Q9UBC9 169 aa13.53□□□□□ -0.24
GARNL3-204ENST00000429629 BAG5Q9UL15 447 aa13.53□□□□□ -0.24
GARNL3-204ENST00000429629 LIPGQ9Y5X9 500 aa13.53□□□□□ -0.24
GARNL3-204ENST00000429629 FIGNL2A6NMB9 653 aa13.52□□□□□ -0.25
GARNL3-204ENST00000429629 FMO6PO60774 539 aa13.52□□□□□ -0.25
GARNL3-204ENST00000429629 BCAS1O75363 584 aaPredicted RBP13.52□□□□□ -0.25
GARNL3-204ENST00000429629 NUDT14O95848 222 aa13.52□□□□□ -0.25
GARNL3-204ENST00000429629 ZNF708P17019 499 aa13.52□□□□□ -0.25
GARNL3-204ENST00000429629 GNLYP22749 145 aa13.52□□□□□ -0.25
GARNL3-204ENST00000429629 APOBEC1P41238 236 aaKnown RBP13.52□□□□□ -0.25
GARNL3-204ENST00000429629 SLC1A3P43003 542 aa13.52□□□□□ -0.25
GARNL3-204ENST00000429629 CA7P43166 264 aa13.52□□□□□ -0.25
GARNL3-204ENST00000429629 CLK1P49759 484 aaKnown RBP13.52□□□□□ -0.25
GARNL3-204ENST00000429629 LHX2P50458 406 aa13.52□□□□□ -0.25
GARNL3-204ENST00000429629 SESN3P58005 492 aa13.52□□□□□ -0.25
GARNL3-204ENST00000429629 SLC25A3Q00325 362 aa13.52□□□□□ -0.25
GARNL3-204ENST00000429629 DMTNQ08495 405 aa13.52□□□□□ -0.25
GARNL3-204ENST00000429629 BNIP1Q12981 228 aa13.52□□□□□ -0.25
GARNL3-204ENST00000429629 MRPL49Q13405 166 aaKnown RBP13.52□□□□□ -0.25
GARNL3-204ENST00000429629 QPRTQ15274 297 aa13.52□□□□□ -0.25
GARNL3-204ENST00000429629 DUSP7Q16829 419 aa13.52□□□□□ -0.25
GARNL3-204ENST00000429629 EMC4Q5J8M3 183 aa13.52□□□□□ -0.25
GARNL3-204ENST00000429629 RAET1LQ5VY80 246 aa13.52□□□□□ -0.25
GARNL3-204ENST00000429629 DOLPP1Q86YN1 238 aa13.52□□□□□ -0.25
GARNL3-204ENST00000429629 DEFB107AQ8IZN7 70 aa13.52□□□□□ -0.25
GARNL3-204ENST00000429629 LSMEM1Q8N8F7 131 aa13.52□□□□□ -0.25
GARNL3-204ENST00000429629 WDYHV1Q96HA8 205 aa13.52□□□□□ -0.25
GARNL3-204ENST00000429629 RNF145Q96MT1 663 aa13.52□□□□□ -0.25
GARNL3-204ENST00000429629 UCN2Q96RP3 112 aa13.52□□□□□ -0.25
GARNL3-204ENST00000429629 CDRT15Q96T59 188 aa13.52□□□□□ -0.25
GARNL3-204ENST00000429629 KCTD14Q9BQ13 255 aaPredicted RBP13.52□□□□□ -0.25
GARNL3-204ENST00000429629 ADAM19Q9H013 955 aa13.52□□□□□ -0.25
GARNL3-204ENST00000429629 TP63Q9H3D4 680 aaPredicted RBP13.52□□□□□ -0.25
GARNL3-204ENST00000429629 PIF1Q9H611 641 aa13.52□□□□□ -0.25
GARNL3-204ENST00000429629 GORASP2Q9H8Y8 452 aa13.52□□□□□ -0.25
GARNL3-204ENST00000429629 RLIMQ9NVW2 624 aa13.52□□□□□ -0.25
GARNL3-204ENST00000429629 ADA2Q9NZK5 511 aa13.52□□□□□ -0.25
GARNL3-204ENST00000429629 SLC13A4Q9UKG4 626 aa13.52□□□□□ -0.25
GARNL3-204ENST00000429629 PRPF19Q9UMS4 504 aaKnown RBP13.52□□□□□ -0.25
GARNL3-204ENST00000429629 SLC6A5Q9Y345 797 aa13.52□□□□□ -0.25
GARNL3-204ENST00000429629 ZNF337Q9Y3M9 751 aa13.52□□□□□ -0.25
GARNL3-204ENST00000429629 GJE1A6NN92 205 aa13.51□□□□□ -0.25
GARNL3-204ENST00000429629 NPIPA2E9PIF3 369 aa13.51□□□□□ -0.25
GARNL3-204ENST00000429629 E9PLN8 166 aa13.51□□□□□ -0.25
GARNL3-204ENST00000429629 NPIPA3F8WFD2 350 aa13.51□□□□□ -0.25
GARNL3-204ENST00000429629 TPST1O60507 370 aa13.51□□□□□ -0.25
GARNL3-204ENST00000429629 ADAM11O75078 769 aa13.51□□□□□ -0.25
GARNL3-204ENST00000429629 CYP7B1O75881 506 aa13.51□□□□□ -0.25
GARNL3-204ENST00000429629 UBOX5O94941 541 aa13.51□□□□□ -0.25
GARNL3-204ENST00000429629 AQP1P29972 269 aa13.51□□□□□ -0.25
GARNL3-204ENST00000429629 RASSF2P50749 326 aa13.51□□□□□ -0.25
GARNL3-204ENST00000429629 CRYBA2P53672 197 aa13.51□□□□□ -0.25
GARNL3-204ENST00000429629 COPZ1P61923 177 aa13.51□□□□□ -0.25
GARNL3-204ENST00000429629 MXRA7P84157 204 aa13.51□□□□□ -0.25
GARNL3-204ENST00000429629 HSF1Q00613 529 aa13.51□□□□□ -0.25
GARNL3-204ENST00000429629 NDUFAF6Q330K2 333 aa13.51□□□□□ -0.25
GARNL3-204ENST00000429629 MTFR2Q6P444 385 aa13.51□□□□□ -0.25
GARNL3-204ENST00000429629 GRINAQ7Z429 371 aa13.51□□□□□ -0.25
GARNL3-204ENST00000429629 TMCO5AQ8N6Q1 288 aa13.51□□□□□ -0.25
GARNL3-204ENST00000429629 FBXO27Q8NI29 283 aa13.51□□□□□ -0.25
GARNL3-204ENST00000429629 POC1BQ8TC44 478 aa13.51□□□□□ -0.25
GARNL3-204ENST00000429629 SLC26A7Q8TE54 656 aa13.51□□□□□ -0.25
GARNL3-204ENST00000429629 POP5Q969H6 163 aaKnown RBP13.51□□□□□ -0.25
GARNL3-204ENST00000429629 TAMM41Q96BW9 452 aa13.51□□□□□ -0.25
GARNL3-204ENST00000429629 VKORC1Q9BQB6 163 aa13.51□□□□□ -0.25
GARNL3-204ENST00000429629 C12orf10Q9HB07 376 aa13.51□□□□□ -0.25
GARNL3-204ENST00000429629 SERINC1Q9NRX5 453 aa13.51□□□□□ -0.25
GARNL3-204ENST00000429629 PAQR5Q9NXK6 330 aaPredicted RBP13.51□□□□□ -0.25
GARNL3-204ENST00000429629 OSGIN2Q9Y236 505 aa13.51□□□□□ -0.25
GARNL3-204ENST00000429629 VDAC3Q9Y277 283 aa13.51□□□□□ -0.25
GARNL3-204ENST00000429629 RPH3AQ9Y2J0 694 aaPredicted RBP13.51□□□□□ -0.25
GARNL3-204ENST00000429629 RP1L1Q8IWN7 2480 aaPredicted RBP13.51□□□□□ -0.25
GARNL3-204ENST00000429629 CXCR6O00574 342 aa13.5□□□□□ -0.25
GARNL3-204ENST00000429629 ADAMDEC1O15204 470 aa13.5□□□□□ -0.25
GARNL3-204ENST00000429629 GMNNO75496 209 aa13.5□□□□□ -0.25
GARNL3-204ENST00000429629 EPPINO95925 133 aa13.5□□□□□ -0.25
GARNL3-204ENST00000429629 FESP07332 822 aa13.5□□□□□ -0.25
GARNL3-204ENST00000429629 GP1BBP13224 206 aa13.5□□□□□ -0.25
GARNL3-204ENST00000429629 GGT1P19440 569 aa13.5□□□□□ -0.25
GARNL3-204ENST00000429629 CD247P20963 164 aa13.5□□□□□ -0.25
GARNL3-204ENST00000429629 IDH2P48735 452 aaKnown RBP13.5□□□□□ -0.25
GARNL3-204ENST00000429629 CCR4P51679 360 aa13.5□□□□□ -0.25
GARNL3-204ENST00000429629 CLDN18P56856 261 aa13.5□□□□□ -0.25
GARNL3-204ENST00000429629 SELENOWP63302 87 aa13.5□□□□□ -0.25
GARNL3-204ENST00000429629 TOMM34Q15785 309 aaPredicted RBP13.5□□□□□ -0.25
GARNL3-204ENST00000429629 NRF1Q16656 503 aa13.5□□□□□ -0.25
GARNL3-204ENST00000429629 EIF2S3LQ2VIR3 472 aaKnown RBP13.5□□□□□ -0.25
GARNL3-204ENST00000429629 DNAL1Q4LDG9 190 aa13.5□□□□□ -0.25
GARNL3-204ENST00000429629 C4orf17Q53FE4 359 aa13.5□□□□□ -0.25
GARNL3-204ENST00000429629 WBP2NLQ6ICG8 309 aa13.5□□□□□ -0.25
GARNL3-204ENST00000429629 TMEM211Q6ICI0 200 aa13.5□□□□□ -0.25
GARNL3-204ENST00000429629 ESPNLQ6ZVH7 1005 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms