RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 SUSD5O60279 629 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 MRPL33O75394 65 aaKnown RBP9.09□□□□□ -0.95
SNX13-203ENST00000428135 DRD5P21918 477 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 DCKP27707 260 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 RFC3P40938 356 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 CSNK1DP48730 415 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 RACK1P63244 317 aaKnown RBP9.09□□□□□ -0.95
SNX13-203ENST00000428135 FOXC1Q12948 553 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 PODNL1Q6PEZ8 512 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 Q6ZPB1 254 aaPredicted RBP9.09□□□□□ -0.95
SNX13-203ENST00000428135 MMP21Q8N119 569 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 PIAS4Q8N2W9 510 aaPredicted RBP9.09□□□□□ -0.95
SNX13-203ENST00000428135 MFSD9Q8NBP5 474 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 ELSPBP1Q96BH3 223 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 WDR83Q9BRX9 315 aaKnown RBP9.09□□□□□ -0.95
SNX13-203ENST00000428135 SYT11Q9BT88 431 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 YTHDF1Q9BYJ9 559 aaKnown RBP9.09□□□□□ -0.95
SNX13-203ENST00000428135 ULBP2Q9BZM5 246 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 SDR39U1Q9NRG7 319 aaPredicted RBP9.09□□□□□ -0.95
SNX13-203ENST00000428135 INIPQ9NRY2 104 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 ADAMTSL1Q8N6G6 1762 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 ASCC3Q8N3C0 2202 aaKnown RBP9.09□□□□□ -0.95
SNX13-203ENST00000428135 EIF3FO00303 357 aaPredicted RBP9.09□□□□□ -0.95
SNX13-203ENST00000428135 ANKRD28O15084 1053 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 ANXA3P12429 323 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 RAC2P15153 192 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 PTH2RP49190 550 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 SSR4P51571 173 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 CYS1Q717R9 158 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 SENP5Q96HI0 755 aaPredicted RBP9.09□□□□□ -0.95
SNX13-203ENST00000428135 BTBD2Q9BX70 525 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 MYNNQ9NPC7 610 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 BOKQ9UMX3 212 aaPredicted RBP9.09□□□□□ -0.95
SNX13-203ENST00000428135 KCNIP3Q9Y2W7 256 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 CCDC163A0A0D9SF12 145 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 ALDOCP09972 364 aaKnown RBP9.09□□□□□ -0.95
SNX13-203ENST00000428135 SLC6A8P48029 635 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 POU4F2Q12837 409 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 FAM189A2Q15884 450 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 SLC22A6Q4U2R8 563 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 OR7E24Q6IFN5 339 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 MOB3CQ70IA8 216 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 CD300LFQ8TDQ1 290 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 THOC3Q96J01 351 aaKnown RBP9.09□□□□□ -0.95
SNX13-203ENST00000428135 NTMT1Q9BV86 223 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 CHRDQ9H2X0 955 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 KCNN3Q9UGI6 736 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 PCDHGA1Q9Y5H4 931 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 LSM1O15116 133 aaKnown RBP9.09□□□□□ -0.95
SNX13-203ENST00000428135 JRKO75564 520 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 SLITRK5O94991 958 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 ADAP00813 363 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 BCL6P41182 706 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 PRPS1P60891 318 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 PPP2CBP62714 309 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 PPP2CAP67775 309 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 CSNK2A1P68400 391 aaPredicted RBP9.09□□□□□ -0.95
SNX13-203ENST00000428135 RBPJQ06330 500 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 ARHGAP19Q14CB8 494 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 FAM57BQ71RH2 274 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 LSM14AQ8ND56 463 aaKnown RBP9.09□□□□□ -0.95
SNX13-203ENST00000428135 CSNK2A3Q8NEV1 391 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 OR2T11Q8NH01 316 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 TM9SF4Q92544 642 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 TCEAL3Q969E4 200 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 OR10A5Q9H207 317 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 UBQLN4Q9NRR5 601 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 LUZP4Q9P127 313 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 AKAP11Q9UKA4 1901 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 ANKRD30BLA7E2S9 258 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 H7C417 338 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 UCHL1P09936 223 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 RAB3BP20337 219 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 SERPINA2P20848 420 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 CD27P26842 260 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 PCGF2P35227 344 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 SPOCK1Q08629 439 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 TAZQ16635 292 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 TBPL2Q6SJ96 375 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 KDM8Q8N371 416 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 ZNF808Q8N4W9 903 aaPredicted RBP9.09□□□□□ -0.95
SNX13-203ENST00000428135 DKK3Q9UBP4 350 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 PADI1Q9ULC6 663 aa9.09□□□□□ -0.95
SNX13-203ENST00000428135 ATG2BQ96BY7 2078 aa9.09□□□□□ -0.96
SNX13-203ENST00000428135 DIRAS3O95661 229 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 SEC61A1P61619 476 aaKnown RBP9.08□□□□□ -0.96
SNX13-203ENST00000428135 MARCH3Q86UD3 253 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 SCGB1C1Q8TD33 95 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 GCDHQ92947 438 aaPredicted RBP9.08□□□□□ -0.96
SNX13-203ENST00000428135 HDAC8Q9BY41 377 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 C20orf27Q9GZN8 174 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 SAP130Q9H0E3 1048 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 TMEM30AQ9NV96 361 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 DUSP13Q9UII6 198 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 LOXHD1Q8IVV2 1947 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 HOXB9P17482 250 aaPredicted RBP9.08□□□□□ -0.96
SNX13-203ENST00000428135 TNFRSF17Q02223 184 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 GLO1Q04760 184 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 SPEM2Q0P670 501 aa9.08□□□□□ -0.96
SNX13-203ENST00000428135 TMEM53Q6P2H8 277 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms