RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 RPS6KB2Q9UBS0 482 aa24.43■■□□□ 1.5
SH3GL3-202ENST00000427482 SPEGQ15772 3267 aa24.43■■□□□ 1.5
SH3GL3-202ENST00000427482 UBL4AP11441 157 aa24.42■■□□□ 1.5
SH3GL3-202ENST00000427482 IL12BP29460 328 aa24.42■■□□□ 1.5
SH3GL3-202ENST00000427482 SH3BGRP55822 239 aaPredicted RBP24.42■■□□□ 1.5
SH3GL3-202ENST00000427482 IRF3Q14653 427 aa24.42■■□□□ 1.5
SH3GL3-202ENST00000427482 APOOLQ6UXV4 268 aa24.42■■□□□ 1.5
SH3GL3-202ENST00000427482 SLCO6A1Q86UG4 719 aa24.42■■□□□ 1.5
SH3GL3-202ENST00000427482 CDK20Q8IZL9 346 aa24.42■■□□□ 1.5
SH3GL3-202ENST00000427482 GATSQ8NAP1 163 aa24.42■■□□□ 1.5
SH3GL3-202ENST00000427482 TMEM163Q8TC26 289 aa24.42■■□□□ 1.5
SH3GL3-202ENST00000427482 BRIX1Q8TDN6 353 aaKnown RBP24.42■■□□□ 1.5
SH3GL3-202ENST00000427482 BPIFA2Q96DR5 249 aa24.42■■□□□ 1.5
SH3GL3-202ENST00000427482 FUNDC2Q9BWH2 189 aa24.42■■□□□ 1.5
SH3GL3-202ENST00000427482 EXOSC3Q9NQT5 275 aaKnown RBP24.42■■□□□ 1.5
SH3GL3-202ENST00000427482 EXPH5Q8NEV8 1989 aa24.42■■□□□ 1.5
SH3GL3-202ENST00000427482 ICOSLGO75144 302 aa24.42■■□□□ 1.5
SH3GL3-202ENST00000427482 PEX19P40855 299 aa24.42■■□□□ 1.5
SH3GL3-202ENST00000427482 MC2RQ01718 297 aa24.42■■□□□ 1.5
SH3GL3-202ENST00000427482 PLCXD2Q0VAA5 305 aa24.42■■□□□ 1.5
SH3GL3-202ENST00000427482 SKP2Q13309 424 aa24.42■■□□□ 1.5
SH3GL3-202ENST00000427482 SYT14P1Q58G82 188 aa24.42■■□□□ 1.5
SH3GL3-202ENST00000427482 RAB2BQ8WUD1 216 aa24.42■■□□□ 1.5
SH3GL3-202ENST00000427482 MESP1Q9BRJ9 268 aa24.42■■□□□ 1.5
SH3GL3-202ENST00000427482 RPL36Q9Y3U8 105 aaKnown RBP24.42■■□□□ 1.5
SH3GL3-202ENST00000427482 TRIM64BA6NI03 449 aa24.41■■□□□ 1.5
SH3GL3-202ENST00000427482 ATE1O95260 518 aa24.41■■□□□ 1.5
SH3GL3-202ENST00000427482 LCKP06239 509 aa24.41■■□□□ 1.5
SH3GL3-202ENST00000427482 PSMB9P28065 219 aa24.41■■□□□ 1.5
SH3GL3-202ENST00000427482 PGGHGQ32M88 737 aa24.41■■□□□ 1.5
SH3GL3-202ENST00000427482 SLC30A6Q6NXT4 461 aa24.41■■□□□ 1.5
SH3GL3-202ENST00000427482 BCDIN3DQ7Z5W3 292 aaKnown RBP24.41■■□□□ 1.5
SH3GL3-202ENST00000427482 FANK1Q8TC84 345 aa24.41■■□□□ 1.5
SH3GL3-202ENST00000427482 PHOSPHO1Q8TCT1 267 aa24.41■■□□□ 1.5
SH3GL3-202ENST00000427482 OMA1Q96E52 524 aa24.41■■□□□ 1.5
SH3GL3-202ENST00000427482 SAMD8Q96LT4 415 aa24.41■■□□□ 1.5
SH3GL3-202ENST00000427482 PPIEQ9UNP9 301 aaKnown RBP24.41■■□□□ 1.5
SH3GL3-202ENST00000427482 R4GN57 208 aa24.41■■□□□ 1.5
SH3GL3-202ENST00000427482 OIP5O43482 229 aa24.4■■□□□ 1.5
SH3GL3-202ENST00000427482 AHCYL1O43865 530 aa24.4■■□□□ 1.5
SH3GL3-202ENST00000427482 RFPL3O75679 317 aa24.4■■□□□ 1.5
SH3GL3-202ENST00000427482 CCL4P13236 92 aa24.4■■□□□ 1.5
SH3GL3-202ENST00000427482 ZNF28P17035 718 aa24.4■■□□□ 1.5
SH3GL3-202ENST00000427482 RNF4P78317 190 aa24.4■■□□□ 1.5
SH3GL3-202ENST00000427482 PSPHP78330 225 aa24.4■■□□□ 1.5
SH3GL3-202ENST00000427482 ZNF91Q05481 1191 aa24.4■■□□□ 1.5
SH3GL3-202ENST00000427482 PLAG1Q6DJT9 500 aa24.4■■□□□ 1.5
SH3GL3-202ENST00000427482 DESI1Q6ICB0 168 aa24.4■■□□□ 1.5
SH3GL3-202ENST00000427482 MRPL14Q6P1L8 145 aaKnown RBP24.4■■□□□ 1.5
SH3GL3-202ENST00000427482 APCDD1LQ8NCL9 501 aa24.4■■□□□ 1.5
SH3GL3-202ENST00000427482 DNAJA4Q8WW22 397 aaPredicted RBP24.4■■□□□ 1.5
SH3GL3-202ENST00000427482 LRR1Q96L50 414 aa24.4■■□□□ 1.5
SH3GL3-202ENST00000427482 ZNF582Q96NG8 517 aaPredicted RBP24.4■■□□□ 1.5
SH3GL3-202ENST00000427482 CDCA4Q9BXL8 241 aa24.4■■□□□ 1.5
SH3GL3-202ENST00000427482 TEX12Q9BXU0 123 aa24.4■■□□□ 1.5
SH3GL3-202ENST00000427482 OR52D1Q9H346 318 aa24.4■■□□□ 1.5
SH3GL3-202ENST00000427482 FBXO8Q9NRD0 319 aa24.4■■□□□ 1.5
SH3GL3-202ENST00000427482 KIF26BQ2KJY2 2108 aa24.4■■□□□ 1.5
SH3GL3-202ENST00000427482 FRYLO94915 3013 aa24.4■■□□□ 1.5
SH3GL3-202ENST00000427482 NGFRP08138 427 aa24.4■■□□□ 1.5
SH3GL3-202ENST00000427482 CYC1P08574 325 aa24.4■■□□□ 1.5
SH3GL3-202ENST00000427482 DBTP11182 482 aaKnown RBP24.4■■□□□ 1.5
SH3GL3-202ENST00000427482 FUT1P19526 365 aa24.4■■□□□ 1.5
SH3GL3-202ENST00000427482 ABCD3P28288 659 aa24.4■■□□□ 1.5
SH3GL3-202ENST00000427482 ST13P50502 369 aaKnown RBP24.4■■□□□ 1.5
SH3GL3-202ENST00000427482 FXYD6P3P58550 94 aa24.4■■□□□ 1.5
SH3GL3-202ENST00000427482 COPZ1P61923 177 aa24.4■■□□□ 1.5
SH3GL3-202ENST00000427482 SLC16A12Q6ZSM3 486 aa24.4■■□□□ 1.5
SH3GL3-202ENST00000427482 ANKRD13BQ86YJ7 626 aa24.4■■□□□ 1.5
SH3GL3-202ENST00000427482 AMER2Q8N7J2 671 aa24.4■■□□□ 1.5
SH3GL3-202ENST00000427482 C9orf43Q8TAL5 461 aaPredicted RBP24.4■■□□□ 1.5
SH3GL3-202ENST00000427482 YIPF6Q96EC8 236 aa24.4■■□□□ 1.5
SH3GL3-202ENST00000427482 WDR77Q9BQA1 342 aaPredicted RBP24.4■■□□□ 1.5
SH3GL3-202ENST00000427482 ENPP5Q9UJA9 477 aa24.4■■□□□ 1.5
SH3GL3-202ENST00000427482 ZNF264O43296 627 aa24.39■■□□□ 1.49
SH3GL3-202ENST00000427482 ADRA2AP08913 450 aa24.39■■□□□ 1.49
SH3GL3-202ENST00000427482 PNLIPRP2P54317 469 aa24.39■■□□□ 1.49
SH3GL3-202ENST00000427482 RPL13AP3Q6NVV1 102 aa24.39■■□□□ 1.49
SH3GL3-202ENST00000427482 GALNT15Q8N3T1 639 aa24.39■■□□□ 1.49
SH3GL3-202ENST00000427482 OR2T33Q8NG76 320 aa24.39■■□□□ 1.49
SH3GL3-202ENST00000427482 TP53INP1Q96A56 240 aa24.39■■□□□ 1.49
SH3GL3-202ENST00000427482 CRB3Q9BUF7 120 aa24.39■■□□□ 1.49
SH3GL3-202ENST00000427482 AKIRIN1Q9H9L7 192 aaPredicted RBP24.39■■□□□ 1.49
SH3GL3-202ENST00000427482 HHATLQ9HCP6 504 aa24.39■■□□□ 1.49
SH3GL3-202ENST00000427482 SURF4O15260 269 aa24.38■■□□□ 1.49
SH3GL3-202ENST00000427482 PAPD4Q6PIY7 484 aaKnown RBP24.38■■□□□ 1.49
SH3GL3-202ENST00000427482 TMEM205Q6UW68 189 aa24.38■■□□□ 1.49
SH3GL3-202ENST00000427482 C3orf49Q96BT1 292 aa24.38■■□□□ 1.49
SH3GL3-202ENST00000427482 UBQLN3Q9H347 655 aa24.38■■□□□ 1.49
SH3GL3-202ENST00000427482 WDR54Q9H977 334 aa24.38■■□□□ 1.49
SH3GL3-202ENST00000427482 MED17Q9NVC6 651 aa24.38■■□□□ 1.49
SH3GL3-202ENST00000427482 IL20RAQ9UHF4 553 aa24.38■■□□□ 1.49
SH3GL3-202ENST00000427482 CARD8Q9Y2G2 431 aa24.38■■□□□ 1.49
SH3GL3-202ENST00000427482 A0A087WUJ7 227 aa24.38■■□□□ 1.49
SH3GL3-202ENST00000427482 A0A1W2PQD3 144 aa24.38■■□□□ 1.49
SH3GL3-202ENST00000427482 EFCAB9A8MZ26 197 aa24.38■■□□□ 1.49
SH3GL3-202ENST00000427482 GTPBP1O00178 669 aaKnown RBP24.38■■□□□ 1.49
SH3GL3-202ENST00000427482 ADORA3P0DMS8 318 aa24.38■■□□□ 1.49
SH3GL3-202ENST00000427482 CBLN3Q6UW01 205 aa24.38■■□□□ 1.49
SH3GL3-202ENST00000427482 HSDL2Q6YN16 418 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms