RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 FHL5Q5TD97 284 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 RSBN1Q5VWQ0 802 aaPredicted RBP1.8□□□□□ -2.12
PTPRC-208ENST00000427110 PVRIGQ6DKI7 326 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 OR5M10Q6IEU7 315 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 KCNIP4Q6PIL6 250 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 ZNF677Q86XU0 584 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 DENND6BQ8NEG7 585 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 NANPQ8TBE9 248 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 PNPT1Q8TCS8 783 aaKnown RBP1.8□□□□□ -2.12
PTPRC-208ENST00000427110 ANKRD49Q8WVL7 239 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 MYLPFQ96A32 169 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 FAF2Q96CS3 445 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 NOL4LQ96MY1 436 aaPredicted RBP1.8□□□□□ -2.12
PTPRC-208ENST00000427110 OR5B2Q96R09 309 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 CNPY3Q9BT09 278 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 NXF5Q9H1B4 397 aaKnown RBP1.8□□□□□ -2.12
PTPRC-208ENST00000427110 PTGES2Q9H7Z7 377 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 CAB39LQ9H9S4 337 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 CALHM2Q9HA72 323 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 PAK1IP1Q9NWT1 392 aaPredicted RBP1.8□□□□□ -2.12
PTPRC-208ENST00000427110 VNN3Q9NY84 501 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 TMOD2Q9NZR1 351 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 CGNQ9P2M7 1197 aaKnown RBP1.8□□□□□ -2.12
PTPRC-208ENST00000427110 SPRR3Q9UBC9 169 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 APOBEC3BQ9UH17 382 aaKnown RBP1.8□□□□□ -2.12
PTPRC-208ENST00000427110 LAMP5Q9UJQ1 280 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 SNX6Q9UNH7 406 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 SAMD4AQ9UPU9 718 aaKnown RBP1.8□□□□□ -2.12
PTPRC-208ENST00000427110 PDE10AQ9Y233 779 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 L3MBTL1Q9Y468 752 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 OARD1Q9Y530 152 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 MAB21L2Q9Y586 359 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 ALG6Q9Y672 507 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 SF3B1O75533 1304 aaKnown RBP eCLIP1.8□□□□□ -2.121e-8■■■■■ 103.4
PTPRC-208ENST00000427110 BRD4O60885 1362 aaPredicted RBP1.8□□□□□ -2.12
PTPRC-208ENST00000427110 LRPPRCP42704 1394 aaKnown RBP1.8□□□□□ -2.12
PTPRC-208ENST00000427110 CCDC144AA2RUR9 1427 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 SCAPERQ9BY12 1400 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 ATP7AQ04656 1500 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 SYNMO15061 1565 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 CLTCL1P53675 1640 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 MAP3K4Q9Y6R4 1608 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 MROH2AA6NES4 1674 aa1.8□□□□□ -2.12
PTPRC-208ENST00000427110 KDM5AP29375 1690 aaKnown RBP1.8□□□□□ -2.12
PTPRC-208ENST00000427110 ZC3H13Q5T200 1668 aaKnown RBP1.8□□□□□ -2.12
PTPRC-208ENST00000427110 TMEM110-MUSTN1A8MSY1 372 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 H3BMQ9 156 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 OR1F1O43749 312 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 TBL1XO60907 577 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 CABYRO75952 493 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 F10P00742 488 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 OR8U8P0C7N1 319 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 DNAH10OSP0CZ25 163 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 PDHBP11177 359 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 PSMB1P20618 241 aaKnown RBP1.79□□□□□ -2.12
PTPRC-208ENST00000427110 HTR2AP28223 471 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 ACAA2P42765 397 aaKnown RBP1.79□□□□□ -2.12
PTPRC-208ENST00000427110 RGRP47804 291 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 EWSR1Q01844 656 aaKnown RBP eCLIP1.79□□□□□ -2.12
PTPRC-208ENST00000427110 SLC10A7Q0GE19 358 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 ELP6Q0PNE2 266 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 PJVKQ0ZLH3 352 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 CUL1Q13616 776 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 NDUFA9Q16795 377 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 SLC36A3Q495N2 470 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 METTL11BQ5VVY1 283 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 WSCD1Q658N2 575 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 NCR3LG1Q68D85 454 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 TFAP2EQ6VUC0 442 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 FRA10AC1Q70Z53 315 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 ARMCX2Q7L311 632 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 C16orf62Q7Z3J2 963 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 TMEM179BQ7Z7N9 219 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 TMEM110Q86TL2 294 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 ACOT1Q86TX2 421 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 SERPINA9Q86WD7 417 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 GRAMD2AQ8IUY3 354 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 UBQLNLQ8IYU4 475 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 PRR22Q8IZ63 422 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 GPR137CQ8N3F9 429 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 STXBP6Q8NFX7 210 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 RAET1EQ8TD07 263 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 ARNTL2Q8WYA1 636 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 CTNNBL1Q8WYA6 563 aaPredicted RBP1.79□□□□□ -2.12
PTPRC-208ENST00000427110 RSPH1Q8WYR4 309 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 BADQ92934 168 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 MARC2Q969Z3 335 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 SLC25A38Q96DW6 304 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 B3GALT6Q96L58 329 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 TTC25Q96NG3 672 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 C19orf24Q9BVV8 132 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 YTHDF1Q9BYJ9 559 aaKnown RBP1.79□□□□□ -2.12
PTPRC-208ENST00000427110 NMUR2Q9GZQ4 415 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 SLITRK2Q9H156 845 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 ISG20L2Q9H9L3 353 aaKnown RBP1.79□□□□□ -2.12
PTPRC-208ENST00000427110 AATFQ9NY61 560 aaKnown RBP eCLIP1.79□□□□□ -2.12
PTPRC-208ENST00000427110 OR1A1Q9P1Q5 309 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 GNG12Q9UBI6 72 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 MOKQ9UQ07 419 aa1.79□□□□□ -2.12
PTPRC-208ENST00000427110 SMC3Q9UQE7 1217 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms