RNA–Protein interactions for RNA: ENST00000425428.6

CD44-207, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,768 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-207ENST00000425428 PPIAP62937 165 aaKnown RBP9.2□□□□□ -0.94
CD44-207ENST00000425428 SPIBQ01892 262 aa9.2□□□□□ -0.94
CD44-207ENST00000425428 CCNIQ14094 377 aa9.2□□□□□ -0.94
CD44-207ENST00000425428 SLC10A1Q14973 349 aa9.2□□□□□ -0.94
CD44-207ENST00000425428 OR1Q1Q15612 314 aa9.2□□□□□ -0.94
CD44-207ENST00000425428 ELOA3BQ3SY89 546 aa9.2□□□□□ -0.94
CD44-207ENST00000425428 GLYR1Q49A26 553 aaPredicted RBP9.2□□□□□ -0.94
CD44-207ENST00000425428 GLIPR1L2Q4G1C9 344 aa9.2□□□□□ -0.94
CD44-207ENST00000425428 ALG10BQ5I7T1 473 aa9.2□□□□□ -0.94
CD44-207ENST00000425428 ENTPD8Q5MY95 495 aa9.2□□□□□ -0.94
CD44-207ENST00000425428 FNDC7Q5VTL7 733 aa9.2□□□□□ -0.94
CD44-207ENST00000425428 RPUSD3Q6P087 351 aaKnown RBP9.2□□□□□ -0.94
CD44-207ENST00000425428 ZNF613Q6PF04 617 aa9.2□□□□□ -0.94
CD44-207ENST00000425428 FAM180AQ6UWF9 173 aa9.2□□□□□ -0.94
CD44-207ENST00000425428 Q6ZS92 163 aa9.2□□□□□ -0.94
CD44-207ENST00000425428 GRINAQ7Z429 371 aa9.2□□□□□ -0.94
CD44-207ENST00000425428 CDK20Q8IZL9 346 aa9.2□□□□□ -0.94
CD44-207ENST00000425428 LINC00471Q8N535 108 aa9.2□□□□□ -0.94
CD44-207ENST00000425428 ELOA3Q8NG57 546 aa9.2□□□□□ -0.94
CD44-207ENST00000425428 OR2M3Q8NG83 312 aa9.2□□□□□ -0.94
CD44-207ENST00000425428 GPR32P1Q8NGA4 272 aa9.2□□□□□ -0.94
CD44-207ENST00000425428 OR6T1Q8NGN1 323 aa9.2□□□□□ -0.94
CD44-207ENST00000425428 PHF10Q8WUB8 498 aaKnown RBP9.2□□□□□ -0.94
CD44-207ENST00000425428 PNPLA2Q96AD5 504 aa9.2□□□□□ -0.94
CD44-207ENST00000425428 PRRC1Q96M27 445 aa9.2□□□□□ -0.94
CD44-207ENST00000425428 CNTNAP3BQ96NU0 1288 aa9.2□□□□□ -0.94
CD44-207ENST00000425428 ZNF300Q96RE9 604 aaPredicted RBP9.2□□□□□ -0.94
CD44-207ENST00000425428 PIP5K1AQ99755 562 aa9.2□□□□□ -0.94
CD44-207ENST00000425428 PIGQQ9BRB3 760 aa9.2□□□□□ -0.94
CD44-207ENST00000425428 CNTNAP3Q9BZ76 1288 aa9.2□□□□□ -0.94
CD44-207ENST00000425428 SLC25A18Q9H1K4 315 aa9.2□□□□□ -0.94
CD44-207ENST00000425428 ARMC1Q9NVT9 282 aa9.2□□□□□ -0.94
CD44-207ENST00000425428 TUBA8Q9NY65 449 aaPredicted RBP9.2□□□□□ -0.94
CD44-207ENST00000425428 VDAC3Q9Y277 283 aa9.2□□□□□ -0.94
CD44-207ENST00000425428 C15orf41Q9Y2V0 281 aa9.2□□□□□ -0.94
CD44-207ENST00000425428 CENPVL1A0A0U1RR11 272 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 FRS3O43559 492 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 ENTPD5O75356 428 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 TRIM3O75382 744 aaPredicted RBP9.19□□□□□ -0.94
CD44-207ENST00000425428 OR5F1O95221 314 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 GADD45GO95257 159 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 LDLRP01130 860 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 H1F0P07305 194 aaKnown RBP9.19□□□□□ -0.94
CD44-207ENST00000425428 ADH6P28332 368 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 APOBEC1P41238 236 aaKnown RBP9.19□□□□□ -0.94
CD44-207ENST00000425428 POLR2HP52434 150 aaKnown RBP9.19□□□□□ -0.94
CD44-207ENST00000425428 GAS1P54826 345 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 ALDH6A1Q02252 535 aaKnown RBP9.19□□□□□ -0.94
CD44-207ENST00000425428 MERTKQ12866 999 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 KLRB1Q12918 225 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 TRAM2Q15035 370 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 QPRTQ15274 297 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 COLEC12Q5KU26 742 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 SWT1Q5T5J6 900 aaKnown RBP9.19□□□□□ -0.94
CD44-207ENST00000425428 RAET1LQ5VY80 246 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 PIWIL3Q7Z3Z3 882 aaKnown RBP9.19□□□□□ -0.94
CD44-207ENST00000425428 ADGRG5Q8IZF4 528 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 FAM109AQ8N4B1 249 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 LSMEM1Q8N8F7 131 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 FAM71CQ8NEG0 241 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 ADAMTS16Q8TE57 1224 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 RNF138Q8WVD3 245 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 PYDC1Q8WXC3 89 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 SLC38A4Q969I6 547 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 C1GALT1C1Q96EU7 318 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 WBP1Q96G27 269 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 MPP4Q96JB8 637 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 MRGPRX4Q96LA9 322 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 HS6ST2Q96MM7 605 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 GNRHR2Q96P88 292 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 TTTY12Q9BZ98 90 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 DCLRE1BQ9H816 532 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 S100A14Q9HCY8 104 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 DNAJB9Q9UBS3 223 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 ICAM5Q9UMF0 924 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 MRPS18CQ9Y3D5 142 aaKnown RBP9.19□□□□□ -0.94
CD44-207ENST00000425428 FREM3P0C091 2139 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 ACACBO00763 2458 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 TNFRSF1BP20333 461 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 PTGDSP41222 190 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 YAP1P46937 504 aaKnown RBP9.19□□□□□ -0.94
CD44-207ENST00000425428 ELF3P78545 371 aaPredicted RBP9.19□□□□□ -0.94
CD44-207ENST00000425428 NDUFAF6Q330K2 333 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 FGD3Q5JSP0 725 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 PDSS1Q5T2R2 415 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 OR2T5Q6IEZ7 315 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 TTC33Q6PID6 262 aaPredicted RBP9.19□□□□□ -0.94
CD44-207ENST00000425428 CBLN3Q6UW01 205 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 C5orf46Q6UWT4 87 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 FADS6Q8N9I5 356 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 ZFP62Q8NB50 900 aaPredicted RBP9.19□□□□□ -0.94
CD44-207ENST00000425428 OR2T29Q8NH02 315 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 GPR119Q8TDV5 335 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 DDIT4LQ96D03 193 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 DUS3LQ96G46 650 aaKnown RBP9.19□□□□□ -0.94
CD44-207ENST00000425428 SLC41A3Q96GZ6 507 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 EPYCQ99645 322 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 AMBRA1Q9C0C7 1298 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 KLHL4Q9C0H6 718 aa9.19□□□□□ -0.94
CD44-207ENST00000425428 ANKRD19PQ9H560 264 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms