RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 ATP12AP54707 1039 aa13.25□□□□□ -0.29
ATG4B-209ENST00000425239 SUMO3P55854 103 aaPredicted RBP13.25□□□□□ -0.29
ATG4B-209ENST00000425239 RPL38P63173 70 aaKnown RBP13.25□□□□□ -0.29
ATG4B-209ENST00000425239 PCLAFQ15004 111 aa13.25□□□□□ -0.29
ATG4B-209ENST00000425239 CFAP157Q5JU67 520 aa13.25□□□□□ -0.29
ATG4B-209ENST00000425239 BHLHA15Q7RTS1 189 aaPredicted RBP13.25□□□□□ -0.29
ATG4B-209ENST00000425239 PHC2Q8IXK0 858 aa13.25□□□□□ -0.29
ATG4B-209ENST00000425239 CNPY4Q8N129 248 aa13.25□□□□□ -0.29
ATG4B-209ENST00000425239 SLC43A2Q8N370 569 aa13.25□□□□□ -0.29
ATG4B-209ENST00000425239 KISS1RQ969F8 398 aaPredicted RBP13.25□□□□□ -0.29
ATG4B-209ENST00000425239 COQ8BQ96D53 544 aa13.25□□□□□ -0.29
ATG4B-209ENST00000425239 MRGPRX4Q96LA9 322 aa13.25□□□□□ -0.29
ATG4B-209ENST00000425239 USB1Q9BQ65 265 aaKnown RBP13.25□□□□□ -0.29
ATG4B-209ENST00000425239 POTEKPQ9BYX7 375 aa13.25□□□□□ -0.29
ATG4B-209ENST00000425239 HOXD1Q9GZZ0 328 aa13.25□□□□□ -0.29
ATG4B-209ENST00000425239 NGBQ9NPG2 151 aa13.25□□□□□ -0.29
ATG4B-209ENST00000425239 ZCCHC3Q9NUD5 404 aaKnown RBP13.25□□□□□ -0.29
ATG4B-209ENST00000425239 CISD1Q9NZ45 108 aaKnown RBP13.25□□□□□ -0.29
ATG4B-209ENST00000425239 GIMAP2Q9UG22 337 aa13.25□□□□□ -0.29
ATG4B-209ENST00000425239 B3GALT5Q9Y2C3 310 aa13.25□□□□□ -0.29
ATG4B-209ENST00000425239 SNX8Q9Y5X2 465 aa13.25□□□□□ -0.29
ATG4B-209ENST00000425239 PLCE1Q9P212 2302 aa13.24□□□□□ -0.29
ATG4B-209ENST00000425239 UQCRHLA0A096LP55 91 aa13.24□□□□□ -0.29
ATG4B-209ENST00000425239 A0A1W2PNR3 127 aa13.24□□□□□ -0.29
ATG4B-209ENST00000425239 C9JVG2 144 aa13.24□□□□□ -0.29
ATG4B-209ENST00000425239 KIF2AO00139 706 aaPredicted RBP13.24□□□□□ -0.29
ATG4B-209ENST00000425239 SCAMP2O15127 329 aaKnown RBP13.24□□□□□ -0.29
ATG4B-209ENST00000425239 CYTIPO60759 359 aa13.24□□□□□ -0.29
ATG4B-209ENST00000425239 H6PDO95479 791 aa13.24□□□□□ -0.29
ATG4B-209ENST00000425239 CHRNGP07510 517 aa13.24□□□□□ -0.29
ATG4B-209ENST00000425239 NEFHP12036 1026 aa13.24□□□□□ -0.29
ATG4B-209ENST00000425239 COX5AP20674 150 aa13.24□□□□□ -0.29
ATG4B-209ENST00000425239 IGHV1-2P23083 117 aa13.24□□□□□ -0.29
ATG4B-209ENST00000425239 IL32P24001 234 aa13.24□□□□□ -0.29
ATG4B-209ENST00000425239 ASMTP46597 345 aa13.24□□□□□ -0.29
ATG4B-209ENST00000425239 CCT3P49368 545 aaKnown RBP13.24□□□□□ -0.29
ATG4B-209ENST00000425239 DCST2Q5T1A1 773 aa13.24□□□□□ -0.29
ATG4B-209ENST00000425239 AP1ARQ63HQ0 302 aa13.24□□□□□ -0.29
ATG4B-209ENST00000425239 HMBOX1Q6NT76 420 aa13.24□□□□□ -0.29
ATG4B-209ENST00000425239 SZRD1Q7Z422 152 aa13.24□□□□□ -0.29
ATG4B-209ENST00000425239 RIMKLAQ8IXN7 391 aa13.24□□□□□ -0.29
ATG4B-209ENST00000425239 IFT20Q8IY31 132 aa13.24□□□□□ -0.29
ATG4B-209ENST00000425239 OR10H5Q8NGA6 315 aa13.24□□□□□ -0.29
ATG4B-209ENST00000425239 ZNF775Q96BV0 537 aaPredicted RBP13.24□□□□□ -0.29
ATG4B-209ENST00000425239 REXO5Q96IC2 774 aaKnown RBP13.24□□□□□ -0.29
ATG4B-209ENST00000425239 ACTRT3Q9BYD9 372 aa13.24□□□□□ -0.29
ATG4B-209ENST00000425239 A0A1W2PP18 115 aa13.23□□□□□ -0.29
ATG4B-209ENST00000425239 GJE1A6NN92 205 aa13.23□□□□□ -0.29
ATG4B-209ENST00000425239 ZNF724A8MTY0 619 aa13.23□□□□□ -0.29
ATG4B-209ENST00000425239 LYZL6O75951 148 aa13.23□□□□□ -0.29
ATG4B-209ENST00000425239 ARRB2P32121 409 aa13.23□□□□□ -0.29
ATG4B-209ENST00000425239 C21orf58P58505 322 aa13.23□□□□□ -0.29
ATG4B-209ENST00000425239 FAPQ12884 760 aa13.23□□□□□ -0.29
ATG4B-209ENST00000425239 PTGR1Q14914 329 aa13.23□□□□□ -0.29
ATG4B-209ENST00000425239 GALNTL6Q49A17 601 aa13.23□□□□□ -0.29
ATG4B-209ENST00000425239 XKR7Q5GH72 579 aa13.23□□□□□ -0.29
ATG4B-209ENST00000425239 C11orf71Q6IPW1 123 aa13.23□□□□□ -0.29
ATG4B-209ENST00000425239 R3HCC1LQ7Z5L2 792 aaKnown RBP13.23□□□□□ -0.29
ATG4B-209ENST00000425239 OR5W2Q8NH69 310 aa13.23□□□□□ -0.29
ATG4B-209ENST00000425239 OR5P2Q8WZ92 322 aa13.23□□□□□ -0.29
ATG4B-209ENST00000425239 JADE3Q92613 823 aa13.23□□□□□ -0.29
ATG4B-209ENST00000425239 C3orf30Q96M34 536 aa13.23□□□□□ -0.29
ATG4B-209ENST00000425239 ZNF300Q96RE9 604 aaPredicted RBP13.23□□□□□ -0.29
ATG4B-209ENST00000425239 SDF2Q99470 211 aa13.23□□□□□ -0.29
ATG4B-209ENST00000425239 TRMOQ9BU70 441 aa13.23□□□□□ -0.29
ATG4B-209ENST00000425239 REPIN1Q9BWE0 567 aaKnown RBP13.23□□□□□ -0.29
ATG4B-209ENST00000425239 SERHL2Q9H4I8 314 aa13.23□□□□□ -0.29
ATG4B-209ENST00000425239 FIS1Q9Y3D6 152 aa13.23□□□□□ -0.29
ATG4B-209ENST00000425239 DTNAQ9Y4J8 743 aa13.23□□□□□ -0.29
ATG4B-209ENST00000425239 TRAF6Q9Y4K3 522 aa13.23□□□□□ -0.29
ATG4B-209ENST00000425239 IGHV4-30-2A0A087WSY4 118 aa13.22□□□□□ -0.29
ATG4B-209ENST00000425239 CENPVL1A0A0U1RR11 272 aa13.22□□□□□ -0.29
ATG4B-209ENST00000425239 E7EQL1 145 aa13.22□□□□□ -0.29
ATG4B-209ENST00000425239 PIP5K1BO14986 540 aa13.22□□□□□ -0.29
ATG4B-209ENST00000425239 EIF4E2O60573 245 aaKnown RBP13.22□□□□□ -0.29
ATG4B-209ENST00000425239 FCMRO60667 390 aa13.22□□□□□ -0.29
ATG4B-209ENST00000425239 TRIM13O60858 407 aa13.22□□□□□ -0.29
ATG4B-209ENST00000425239 KRT4P19013 534 aa13.22□□□□□ -0.29
ATG4B-209ENST00000425239 PTNP21246 168 aa13.22□□□□□ -0.29
ATG4B-209ENST00000425239 IRX1P78414 480 aaPredicted RBP13.22□□□□□ -0.29
ATG4B-209ENST00000425239 RASGEF1BQ0VAM2 473 aa13.22□□□□□ -0.29
ATG4B-209ENST00000425239 SELENBP1Q13228 472 aa13.22□□□□□ -0.29
ATG4B-209ENST00000425239 SKP2Q13309 424 aa13.22□□□□□ -0.29
ATG4B-209ENST00000425239 PPA1Q15181 289 aa13.22□□□□□ -0.29
ATG4B-209ENST00000425239 QPRTQ15274 297 aa13.22□□□□□ -0.29
ATG4B-209ENST00000425239 TIMM23BQ5SRD1 257 aa13.22□□□□□ -0.29
ATG4B-209ENST00000425239 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.22□□□□□ -0.29
ATG4B-209ENST00000425239 KRTCAP2Q8N6L1 136 aa13.22□□□□□ -0.29
ATG4B-209ENST00000425239 ZNF433Q8N7K0 673 aaPredicted RBP13.22□□□□□ -0.29
ATG4B-209ENST00000425239 ATP6V1C2Q8NEY4 427 aa13.22□□□□□ -0.29
ATG4B-209ENST00000425239 ADAMTS15Q8TE58 950 aa13.22□□□□□ -0.29
ATG4B-209ENST00000425239 TWIST2Q8WVJ9 160 aa13.22□□□□□ -0.29
ATG4B-209ENST00000425239 GTPBP3Q969Y2 492 aaKnown RBP13.22□□□□□ -0.29
ATG4B-209ENST00000425239 L2HGDHQ9H9P8 463 aa13.22□□□□□ -0.29
ATG4B-209ENST00000425239 KLHL9Q9P2J3 617 aa13.22□□□□□ -0.29
ATG4B-209ENST00000425239 IGKV3D-15A0A087WSY6 115 aa13.21□□□□□ -0.29
ATG4B-209ENST00000425239 ZNF716A6NP11 495 aa13.21□□□□□ -0.29
ATG4B-209ENST00000425239 ZNF264O43296 627 aa13.21□□□□□ -0.29
ATG4B-209ENST00000425239 NUDT14O95848 222 aa13.21□□□□□ -0.29
ATG4B-209ENST00000425239 C6orf47O95873 294 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms