RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 FCMRO60667 390 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 PEX14O75381 377 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 NT5EP21589 574 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 GIFP27352 417 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 MECP2P51608 486 aaKnown RBP14.12□□□□□ -0.15
C9orf3-204ENST00000424143 AP3S2P59780 193 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 ACTA2P62736 377 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 ACTG2P63267 376 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 RPL6Q02878 288 aaKnown RBP14.12□□□□□ -0.15
C9orf3-204ENST00000424143 ILF3Q12906 894 aaKnown RBP eCLIP14.12□□□□□ -0.15
C9orf3-204ENST00000424143 SNTB2Q13425 540 aaKnown RBP14.12□□□□□ -0.15
C9orf3-204ENST00000424143 GGTLC2Q14390 218 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 MLF2Q15773 248 aaPredicted RBP14.12□□□□□ -0.15
C9orf3-204ENST00000424143 CCDC85BQ15834 202 aaPredicted RBP14.12□□□□□ -0.15
C9orf3-204ENST00000424143 ST3GAL2Q16842 350 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 FNDC3BQ53EP0 1204 aaKnown RBP14.12□□□□□ -0.15
C9orf3-204ENST00000424143 UBE2NLQ5JXB2 153 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 C18orf63Q68DL7 685 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 NUDT18Q6ZVK8 323 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 KRT74Q7RTS7 529 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 OR8H3Q8N146 312 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 ZNF619Q8N2I2 560 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 LSMEM1Q8N8F7 131 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 OR10H4Q8NGA5 316 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 MRPL48Q96GC5 212 aaKnown RBP14.12□□□□□ -0.15
C9orf3-204ENST00000424143 ERMAPQ96PL5 475 aaPredicted RBP14.12□□□□□ -0.15
C9orf3-204ENST00000424143 SDF2Q99470 211 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 TMPRSS13Q9BYE2 586 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 GSX2Q9BZM3 304 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 NARFLQ9H6Q4 476 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 SLC6A20Q9NP91 592 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 MAT2BQ9NZL9 334 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 SIGLEC7Q9Y286 467 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 MAB21L2Q9Y586 359 aa14.12□□□□□ -0.15
C9orf3-204ENST00000424143 PCDHGA9Q9Y5G4 932 aaKnown RBP14.12□□□□□ -0.15
C9orf3-204ENST00000424143 TRAV6A0A075B6T7 132 aa14.11□□□□□ -0.15
C9orf3-204ENST00000424143 A0A0G2JN53 185 aa14.11□□□□□ -0.15
C9orf3-204ENST00000424143 A0A1B0GUH1 482 aa14.11□□□□□ -0.15
C9orf3-204ENST00000424143 GLOD5A6NK44 160 aa14.11□□□□□ -0.15
C9orf3-204ENST00000424143 E9PI62 339 aa14.11□□□□□ -0.15
C9orf3-204ENST00000424143 ZNF593O00488 134 aaPredicted RBP14.11□□□□□ -0.15
C9orf3-204ENST00000424143 FLRT2O43155 660 aa14.11□□□□□ -0.15
C9orf3-204ENST00000424143 IFNGP01579 166 aa14.11□□□□□ -0.15
C9orf3-204ENST00000424143 CPN1P15169 458 aa14.11□□□□□ -0.15
C9orf3-204ENST00000424143 CXCL3P19876 107 aa14.11□□□□□ -0.15
C9orf3-204ENST00000424143 MAKP20794 623 aa14.11□□□□□ -0.15
C9orf3-204ENST00000424143 CMPK1P30085 196 aa14.11□□□□□ -0.15
C9orf3-204ENST00000424143 P2RY2P41231 377 aa14.11□□□□□ -0.15
C9orf3-204ENST00000424143 RBM34P42696 430 aaKnown RBP14.11□□□□□ -0.15
C9orf3-204ENST00000424143 CCR9P51686 369 aa14.11□□□□□ -0.15
C9orf3-204ENST00000424143 OR10A3P58181 314 aa14.11□□□□□ -0.15
C9orf3-204ENST00000424143 RAB14P61106 215 aa14.11□□□□□ -0.15
C9orf3-204ENST00000424143 DEFB103AP81534 67 aa14.11□□□□□ -0.15
C9orf3-204ENST00000424143 E2F1Q01094 437 aa14.11□□□□□ -0.15
C9orf3-204ENST00000424143 PUDPQ08623 228 aa14.11□□□□□ -0.15
C9orf3-204ENST00000424143 METTL11BQ5VVY1 283 aa14.11□□□□□ -0.15
C9orf3-204ENST00000424143 SLC39A5Q6ZMH5 540 aa14.11□□□□□ -0.15
C9orf3-204ENST00000424143 RTL4Q6ZR62 310 aa14.11□□□□□ -0.15
C9orf3-204ENST00000424143 GLRX5Q86SX6 157 aa14.11□□□□□ -0.15
C9orf3-204ENST00000424143 SLC38A6Q8IZM9 456 aa14.11□□□□□ -0.15
C9orf3-204ENST00000424143 OR6V1Q8N148 313 aa14.11□□□□□ -0.15
C9orf3-204ENST00000424143 LRRC25Q8N386 305 aaPredicted RBP14.11□□□□□ -0.15
C9orf3-204ENST00000424143 POMGNT2Q8NAT1 580 aa14.11□□□□□ -0.15
C9orf3-204ENST00000424143 OR2L3Q8NG85 312 aa14.11□□□□□ -0.15
C9orf3-204ENST00000424143 RPS4Y2Q8TD47 263 aa14.11□□□□□ -0.15
C9orf3-204ENST00000424143 STACQ99469 402 aa14.11□□□□□ -0.15
C9orf3-204ENST00000424143 ZNF436Q9C0F3 470 aaPredicted RBP14.11□□□□□ -0.15
C9orf3-204ENST00000424143 NPDC1Q9NQX5 325 aaPredicted RBP14.11□□□□□ -0.15
C9orf3-204ENST00000424143 CLDND1Q9NY35 253 aa14.11□□□□□ -0.15
C9orf3-204ENST00000424143 ICAM5Q9UMF0 924 aa14.11□□□□□ -0.15
C9orf3-204ENST00000424143 PRKAB1Q9Y478 270 aa14.11□□□□□ -0.15
C9orf3-204ENST00000424143 A0A087WV62 115 aa14.1□□□□□ -0.15
C9orf3-204ENST00000424143 OR6C65A6NJZ3 312 aa14.1□□□□□ -0.15
C9orf3-204ENST00000424143 FAM183AA6NL82 134 aa14.1□□□□□ -0.15
C9orf3-204ENST00000424143 PRRT4C9JH25 899 aa14.1□□□□□ -0.15
C9orf3-204ENST00000424143 PRKRAO75569 313 aaKnown RBP14.1□□□□□ -0.15
C9orf3-204ENST00000424143 IL5P05113 134 aa14.1□□□□□ -0.15
C9orf3-204ENST00000424143 OR2T7P0C7T2 308 aa14.1□□□□□ -0.15
C9orf3-204ENST00000424143 LINC00271P0C7V0 271 aa14.1□□□□□ -0.15
C9orf3-204ENST00000424143 NID1P14543 1247 aa14.1□□□□□ -0.15
C9orf3-204ENST00000424143 ZNF3P17036 446 aa14.1□□□□□ -0.15
C9orf3-204ENST00000424143 CERS1P27544 350 aa14.1□□□□□ -0.15
C9orf3-204ENST00000424143 NDUFS1P28331 727 aa14.1□□□□□ -0.15
C9orf3-204ENST00000424143 GBX2P52951 348 aaPredicted RBP14.1□□□□□ -0.15
C9orf3-204ENST00000424143 OR1Q1Q15612 314 aa14.1□□□□□ -0.15
C9orf3-204ENST00000424143 AANATQ16613 207 aa14.1□□□□□ -0.15
C9orf3-204ENST00000424143 ZSWIM7Q19AV6 140 aa14.1□□□□□ -0.15
C9orf3-204ENST00000424143 ZNF750Q32MQ0 723 aa14.1□□□□□ -0.15
C9orf3-204ENST00000424143 SLC25A35Q3KQZ1 300 aa14.1□□□□□ -0.15
C9orf3-204ENST00000424143 AMZ1Q400G9 498 aa14.1□□□□□ -0.15
C9orf3-204ENST00000424143 RPL22L1Q6P5R6 122 aaKnown RBP14.1□□□□□ -0.15
C9orf3-204ENST00000424143 USP53Q70EK8 1073 aa14.1□□□□□ -0.15
C9orf3-204ENST00000424143 HMGN2P46Q86SG4 172 aa14.1□□□□□ -0.15
C9orf3-204ENST00000424143 GPAT4Q86UL3 456 aa14.1□□□□□ -0.15
C9orf3-204ENST00000424143 BPHLQ86WA6 291 aaPredicted RBP14.1□□□□□ -0.15
C9orf3-204ENST00000424143 OR2T27Q8NH04 317 aa14.1□□□□□ -0.15
C9orf3-204ENST00000424143 SMPDL3BQ92485 455 aa14.1□□□□□ -0.15
C9orf3-204ENST00000424143 GHSRQ92847 366 aa14.1□□□□□ -0.15
C9orf3-204ENST00000424143 SMIM19Q96E16 107 aa14.1□□□□□ -0.15
C9orf3-204ENST00000424143 C4orf36Q96KX1 117 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms