RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 RUNX1T1Q06455 604 aa11.02□□□□□ -0.65
PTPRN-204ENST00000423636 DMWDQ09019 674 aa11.02□□□□□ -0.65
PTPRN-204ENST00000423636 MGAT2Q10469 447 aa11.02□□□□□ -0.65
PTPRN-204ENST00000423636 CBX3Q13185 183 aa11.02□□□□□ -0.65
PTPRN-204ENST00000423636 NCF4Q15080 339 aa11.02□□□□□ -0.65
PTPRN-204ENST00000423636 KIRREL2Q6UWL6 708 aa11.02□□□□□ -0.65
PTPRN-204ENST00000423636 NPSR1Q6W5P4 371 aa11.02□□□□□ -0.65
PTPRN-204ENST00000423636 TMPRSS11AQ6ZMR5 421 aa11.02□□□□□ -0.65
PTPRN-204ENST00000423636 ZNF619Q8N2I2 560 aa11.02□□□□□ -0.65
PTPRN-204ENST00000423636 FAM26EQ8N5C1 309 aa11.02□□□□□ -0.65
PTPRN-204ENST00000423636 FAM98AQ8NCA5 519 aaKnown RBP11.02□□□□□ -0.65
PTPRN-204ENST00000423636 CEP76Q8TAP6 659 aa11.02□□□□□ -0.65
PTPRN-204ENST00000423636 PTP4A1Q93096 173 aa11.02□□□□□ -0.65
PTPRN-204ENST00000423636 CD180Q99467 661 aa11.02□□□□□ -0.65
PTPRN-204ENST00000423636 SLC30A2Q9BRI3 323 aa11.02□□□□□ -0.65
PTPRN-204ENST00000423636 PIGUQ9H490 435 aa11.02□□□□□ -0.65
PTPRN-204ENST00000423636 UNC119BA6NIH7 251 aa11.01□□□□□ -0.65
PTPRN-204ENST00000423636 MPZL2O60487 215 aa11.01□□□□□ -0.65
PTPRN-204ENST00000423636 SMIM10L1P0DMW3 83 aa11.01□□□□□ -0.65
PTPRN-204ENST00000423636 BCKDHBP21953 392 aa11.01□□□□□ -0.65
PTPRN-204ENST00000423636 GAS1P54826 345 aa11.01□□□□□ -0.65
PTPRN-204ENST00000423636 UBE2IP63279 158 aaKnown RBP11.01□□□□□ -0.65
PTPRN-204ENST00000423636 ZP2Q05996 745 aa11.01□□□□□ -0.65
PTPRN-204ENST00000423636 GNA13Q14344 377 aa11.01□□□□□ -0.65
PTPRN-204ENST00000423636 ARHGAP11BQ3KRB8 267 aa11.01□□□□□ -0.65
PTPRN-204ENST00000423636 NIPAL1Q6NVV3 410 aa11.01□□□□□ -0.65
PTPRN-204ENST00000423636 MBOAT2Q6ZWT7 520 aa11.01□□□□□ -0.65
PTPRN-204ENST00000423636 C17orf47Q8NEP4 570 aa11.01□□□□□ -0.65
PTPRN-204ENST00000423636 ATP6V1C2Q8NEY4 427 aa11.01□□□□□ -0.65
PTPRN-204ENST00000423636 C16orf52Q8NHV5 167 aa11.01□□□□□ -0.65
PTPRN-204ENST00000423636 SFXN5Q8TD22 340 aa11.01□□□□□ -0.65
PTPRN-204ENST00000423636 RASD2Q96D21 266 aa11.01□□□□□ -0.65
PTPRN-204ENST00000423636 SMIM10Q96HG1 83 aa11.01□□□□□ -0.65
PTPRN-204ENST00000423636 ERMAPQ96PL5 475 aaPredicted RBP11.01□□□□□ -0.65
PTPRN-204ENST00000423636 RTN4RQ9BZR6 473 aa11.01□□□□□ -0.65
PTPRN-204ENST00000423636 CNOT2Q9NZN8 540 aaKnown RBP11.01□□□□□ -0.65
PTPRN-204ENST00000423636 SEC14L4Q9UDX3 406 aa11.01□□□□□ -0.65
PTPRN-204ENST00000423636 TESQ9UGI8 421 aaKnown RBP11.01□□□□□ -0.65
PTPRN-204ENST00000423636 FBXL21Q9UKT6 434 aa11.01□□□□□ -0.65
PTPRN-204ENST00000423636 STUB1Q9UNE7 303 aa11.01□□□□□ -0.65
PTPRN-204ENST00000423636 WBP11Q9Y2W2 641 aaKnown RBP11.01□□□□□ -0.65
PTPRN-204ENST00000423636 ARID1AO14497 2285 aa11.01□□□□□ -0.65
PTPRN-204ENST00000423636 A0A1W2PQ09 198 aa11.01□□□□□ -0.65
PTPRN-204ENST00000423636 CDHR4A6H8M9 788 aa11.01□□□□□ -0.65
PTPRN-204ENST00000423636 MLLT3P42568 568 aaPredicted RBP11.01□□□□□ -0.65
PTPRN-204ENST00000423636 CTBP2P56545 445 aa11.01□□□□□ -0.65
PTPRN-204ENST00000423636 IDNKQ5T6J7 187 aa11.01□□□□□ -0.65
PTPRN-204ENST00000423636 RANBP3LQ86VV4 465 aaPredicted RBP11.01□□□□□ -0.65
PTPRN-204ENST00000423636 TRIM69Q86WT6 500 aa11.01□□□□□ -0.65
PTPRN-204ENST00000423636 SLC37A3Q8NCC5 494 aa11.01□□□□□ -0.65
PTPRN-204ENST00000423636 ADOQ96SZ5 270 aa11.01□□□□□ -0.65
PTPRN-204ENST00000423636 A0A1W2PPC4 97 aa11.01□□□□□ -0.65
PTPRN-204ENST00000423636 PLGP00747 810 aaPredicted RBP11.01□□□□□ -0.65
PTPRN-204ENST00000423636 PROS1P07225 676 aa11.01□□□□□ -0.65
PTPRN-204ENST00000423636 SHC1P29353 583 aa11.01□□□□□ -0.65
PTPRN-204ENST00000423636 PYCR1P32322 319 aa11.01□□□□□ -0.65
PTPRN-204ENST00000423636 ERVK-25P63136 954 aa11.01□□□□□ -0.65
PTPRN-204ENST00000423636 FBXO43Q4G163 708 aa11.01□□□□□ -0.65
PTPRN-204ENST00000423636 ASB18Q6ZVZ8 466 aa11.01□□□□□ -0.65
PTPRN-204ENST00000423636 TDHQ8IZJ6 230 aa11.01□□□□□ -0.65
PTPRN-204ENST00000423636 KDM8Q8N371 416 aa11.01□□□□□ -0.65
PTPRN-204ENST00000423636 PHOSPHO1Q8TCT1 267 aa11.01□□□□□ -0.65
PTPRN-204ENST00000423636 GCDHQ92947 438 aaPredicted RBP11.01□□□□□ -0.65
PTPRN-204ENST00000423636 NMNAT3Q96T66 252 aa11.01□□□□□ -0.65
PTPRN-204ENST00000423636 KATNB1Q9BVA0 655 aa11.01□□□□□ -0.65
PTPRN-204ENST00000423636 PITHD1Q9GZP4 211 aaPredicted RBP11.01□□□□□ -0.65
PTPRN-204ENST00000423636 FOLH1BQ9HBA9 442 aa11.01□□□□□ -0.65
PTPRN-204ENST00000423636 PRTFDC1Q9NRG1 225 aa11.01□□□□□ -0.65
PTPRN-204ENST00000423636 ENOPH1Q9UHY7 261 aa11.01□□□□□ -0.65
PTPRN-204ENST00000423636 IER3IP1Q9Y5U9 82 aa11.01□□□□□ -0.65
PTPRN-204ENST00000423636 DSPP15924 2871 aaKnown RBP11□□□□□ -0.65
PTPRN-204ENST00000423636 A0A1B0GTH9 108 aa11□□□□□ -0.65
PTPRN-204ENST00000423636 DAPL1A0PJW8 107 aa11□□□□□ -0.65
PTPRN-204ENST00000423636 RPP14O95059 124 aaKnown RBP11□□□□□ -0.65
PTPRN-204ENST00000423636 CHRNB1P11230 501 aa11□□□□□ -0.65
PTPRN-204ENST00000423636 NID1P14543 1247 aa11□□□□□ -0.65
PTPRN-204ENST00000423636 PRKAR1BP31321 381 aa11□□□□□ -0.65
PTPRN-204ENST00000423636 RORCP51449 518 aa11□□□□□ -0.65
PTPRN-204ENST00000423636 ZNF79Q15937 498 aa11□□□□□ -0.65
PTPRN-204ENST00000423636 ARMC4Q5T2S8 1044 aa11□□□□□ -0.65
PTPRN-204ENST00000423636 FHL5Q5TD97 284 aa11□□□□□ -0.65
PTPRN-204ENST00000423636 PRPF38BQ5VTL8 546 aaKnown RBP11□□□□□ -0.65
PTPRN-204ENST00000423636 IZUMO1Q8IYV9 350 aa11□□□□□ -0.65
PTPRN-204ENST00000423636 SIX5Q8N196 739 aa11□□□□□ -0.65
PTPRN-204ENST00000423636 NATD1Q8N6N6 113 aa11□□□□□ -0.65
PTPRN-204ENST00000423636 PROKR2Q8NFJ6 384 aa11□□□□□ -0.65
PTPRN-204ENST00000423636 OR51Q1Q8NH59 317 aa11□□□□□ -0.65
PTPRN-204ENST00000423636 NT5CQ8TCD5 201 aa11□□□□□ -0.65
PTPRN-204ENST00000423636 UBASH3BQ8TF42 649 aa11□□□□□ -0.65
PTPRN-204ENST00000423636 AHCYL2Q96HN2 611 aaKnown RBP11□□□□□ -0.65
PTPRN-204ENST00000423636 ZSCAN32Q9NX65 697 aa11□□□□□ -0.65
PTPRN-204ENST00000423636 SLC6A5Q9Y345 797 aa11□□□□□ -0.65
PTPRN-204ENST00000423636 BDP1A6H8Y1 2624 aa11□□□□□ -0.65
PTPRN-204ENST00000423636 HYKKA2RU49 373 aa11□□□□□ -0.65
PTPRN-204ENST00000423636 TRAPPC13A5PLN9 417 aa11□□□□□ -0.65
PTPRN-204ENST00000423636 FABP12A6NFH5 140 aa11□□□□□ -0.65
PTPRN-204ENST00000423636 TMEM150CB9EJG8 249 aa11□□□□□ -0.65
PTPRN-204ENST00000423636 TUBA1BP68363 451 aa11□□□□□ -0.65
PTPRN-204ENST00000423636 FOXK2Q01167 660 aa11□□□□□ -0.65
PTPRN-204ENST00000423636 COX10Q12887 443 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms