RNA–Protein interactions for RNA: ENST00000423463.6

VPS13A-208, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,702 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-208ENST00000423463 CFAP157Q5JU67 520 aa2.29□□□□□ -2.04
VPS13A-208ENST00000423463 BEND6Q5SZJ8 279 aaPredicted RBP2.29□□□□□ -2.04
VPS13A-208ENST00000423463 CEP85LQ5SZL2 805 aa2.29□□□□□ -2.04
VPS13A-208ENST00000423463 IRAK1BP1Q5VVH5 260 aa2.29□□□□□ -2.04
VPS13A-208ENST00000423463 FRG2Q64ET8 278 aa2.29□□□□□ -2.04
VPS13A-208ENST00000423463 OR4C11Q6IEV9 310 aa2.29□□□□□ -2.04
VPS13A-208ENST00000423463 GPRIN3Q6ZVF9 776 aa2.29□□□□□ -2.04
VPS13A-208ENST00000423463 PRSS41Q7RTY9 318 aa2.29□□□□□ -2.04
VPS13A-208ENST00000423463 CPEB2Q7Z5Q1 589 aaKnown RBP2.29□□□□□ -2.04
VPS13A-208ENST00000423463 ZNF595Q8IYB9 648 aa2.29□□□□□ -2.04
VPS13A-208ENST00000423463 PRSS58Q8IYP2 241 aa2.29□□□□□ -2.04
VPS13A-208ENST00000423463 C4orf33Q8N1A6 199 aa2.29□□□□□ -2.04
VPS13A-208ENST00000423463 CA13Q8N1Q1 262 aa2.29□□□□□ -2.04
VPS13A-208ENST00000423463 ZCCHC7Q8N3Z6 543 aaKnown RBP2.29□□□□□ -2.04
VPS13A-208ENST00000423463 CCNYL1Q8N7R7 359 aa2.29□□□□□ -2.04
VPS13A-208ENST00000423463 GBP7Q8N8V2 638 aaPredicted RBP2.29□□□□□ -2.04
VPS13A-208ENST00000423463 ACOT4Q8N9L9 421 aa2.29□□□□□ -2.04
VPS13A-208ENST00000423463 CCDC63Q8NA47 563 aa2.29□□□□□ -2.04
VPS13A-208ENST00000423463 CLEC1AQ8NC01 280 aa2.29□□□□□ -2.04
VPS13A-208ENST00000423463 OR4F6Q8NGB9 312 aa2.29□□□□□ -2.04
VPS13A-208ENST00000423463 OR11G2Q8NGC1 345 aa2.29□□□□□ -2.04
VPS13A-208ENST00000423463 OR5T3Q8NGG3 340 aa2.29□□□□□ -2.04
VPS13A-208ENST00000423463 HUS1BQ8NHY5 278 aa2.29□□□□□ -2.04
VPS13A-208ENST00000423463 C9orf43Q8TAL5 461 aaPredicted RBP2.29□□□□□ -2.04
VPS13A-208ENST00000423463 TRPC4APQ8TEL6 797 aa2.29□□□□□ -2.04
VPS13A-208ENST00000423463 CNDP1Q96KN2 507 aa2.29□□□□□ -2.04
VPS13A-208ENST00000423463 MARK4Q96L34 752 aa2.29□□□□□ -2.04
VPS13A-208ENST00000423463 IMMP1LQ96LU5 166 aa2.29□□□□□ -2.04
VPS13A-208ENST00000423463 ZNF382Q96SR6 550 aa2.29□□□□□ -2.04
VPS13A-208ENST00000423463 PIP5K1AQ99755 562 aa2.29□□□□□ -2.04
VPS13A-208ENST00000423463 SLC25A23Q9BV35 468 aa2.29□□□□□ -2.04
VPS13A-208ENST00000423463 ITPAQ9BY32 194 aa2.29□□□□□ -2.04
VPS13A-208ENST00000423463 VN1R1Q9GZP7 353 aa2.29□□□□□ -2.04
VPS13A-208ENST00000423463 AICDAQ9GZX7 198 aa2.29□□□□□ -2.04
VPS13A-208ENST00000423463 STMN4Q9H169 189 aaPredicted RBP2.29□□□□□ -2.04
VPS13A-208ENST00000423463 OR51B5Q9H339 312 aa2.29□□□□□ -2.04
VPS13A-208ENST00000423463 ELOVL6Q9H5J4 265 aa2.29□□□□□ -2.04
VPS13A-208ENST00000423463 DDX31Q9H8H2 851 aaKnown RBP2.29□□□□□ -2.04
VPS13A-208ENST00000423463 COPS7BQ9H9Q2 264 aaPredicted RBP2.29□□□□□ -2.04
VPS13A-208ENST00000423463 LYRM4Q9HD34 91 aa2.29□□□□□ -2.04
VPS13A-208ENST00000423463 MS4A12Q9NXJ0 267 aa2.29□□□□□ -2.04
VPS13A-208ENST00000423463 FBXL4Q9UKA2 621 aa2.29□□□□□ -2.04
VPS13A-208ENST00000423463 MRPS33Q9Y291 106 aaKnown RBP2.29□□□□□ -2.04
VPS13A-208ENST00000423463 SPACA6W5XKT8 324 aa2.29□□□□□ -2.04
VPS13A-208ENST00000423463 CHD8Q9HCK8 2581 aa2.29□□□□□ -2.04
VPS13A-208ENST00000423463 DOCK7Q96N67 2140 aa2.29□□□□□ -2.04
VPS13A-208ENST00000423463 IGKV3D-11A0A0A0MRZ8 115 aa2.28□□□□□ -2.04
VPS13A-208ENST00000423463 IGHV1-45A0A0A0MS14 117 aa2.28□□□□□ -2.04
VPS13A-208ENST00000423463 NSG1A0A0A6YYJ2 146 aa2.28□□□□□ -2.04
VPS13A-208ENST00000423463 ZNF860A6NHJ4 632 aa2.28□□□□□ -2.04
VPS13A-208ENST00000423463 TTC36A6NLP5 189 aa2.28□□□□□ -2.04
VPS13A-208ENST00000423463 HSPB2A8KAH6 182 aa2.28□□□□□ -2.04
VPS13A-208ENST00000423463 MANBAO00462 879 aa2.28□□□□□ -2.04
VPS13A-208ENST00000423463 SLC28A2O43868 658 aa2.28□□□□□ -2.04
VPS13A-208ENST00000423463 TYROBPO43914 113 aa2.28□□□□□ -2.04
VPS13A-208ENST00000423463 DPM1O60762 260 aa2.28□□□□□ -2.04
VPS13A-208ENST00000423463 B4GALT2O60909 372 aa2.28□□□□□ -2.04
VPS13A-208ENST00000423463 JRKO75564 520 aa2.28□□□□□ -2.04
VPS13A-208ENST00000423463 ALPPP05187 535 aa2.28□□□□□ -2.04
VPS13A-208ENST00000423463 SERPINA7P05543 415 aa2.28□□□□□ -2.04
VPS13A-208ENST00000423463 FGF4P08620 206 aa2.28□□□□□ -2.04
VPS13A-208ENST00000423463 CDH2P19022 906 aaPredicted RBP2.28□□□□□ -2.04
VPS13A-208ENST00000423463 HIST1H1TP22492 207 aaPredicted RBP2.28□□□□□ -2.04
VPS13A-208ENST00000423463 CPN2P22792 545 aa2.28□□□□□ -2.04
VPS13A-208ENST00000423463 POU1F1P28069 291 aa2.28□□□□□ -2.04
VPS13A-208ENST00000423463 HMOX2P30519 316 aa2.28□□□□□ -2.04
VPS13A-208ENST00000423463 TLX1P31314 330 aaPredicted RBP2.28□□□□□ -2.04
VPS13A-208ENST00000423463 ARL3P36405 182 aa2.28□□□□□ -2.04
VPS13A-208ENST00000423463 SSR2P43308 183 aa2.28□□□□□ -2.04
VPS13A-208ENST00000423463 GPR12P47775 334 aa2.28□□□□□ -2.04
VPS13A-208ENST00000423463 NAGLUP54802 743 aa2.28□□□□□ -2.04
VPS13A-208ENST00000423463 LIM2P55344 173 aa2.28□□□□□ -2.04
VPS13A-208ENST00000423463 OR4D2P58180 307 aa2.28□□□□□ -2.04
VPS13A-208ENST00000423463 OLR1P78380 273 aa2.28□□□□□ -2.04
VPS13A-208ENST00000423463 LCP2Q13094 533 aa2.28□□□□□ -2.04
VPS13A-208ENST00000423463 SLAMF1Q13291 335 aa2.28□□□□□ -2.04
VPS13A-208ENST00000423463 DDX39BQ13838 428 aaKnown RBP2.28□□□□□ -2.04
VPS13A-208ENST00000423463 LY6DQ14210 128 aa2.28□□□□□ -2.04
VPS13A-208ENST00000423463 TAF11Q15544 211 aa2.28□□□□□ -2.04
VPS13A-208ENST00000423463 NSDHLQ15738 373 aa2.28□□□□□ -2.04
VPS13A-208ENST00000423463 HSPB2Q16082 182 aa2.28□□□□□ -2.04
VPS13A-208ENST00000423463 LACTB2Q53H82 288 aaPredicted RBP2.28□□□□□ -2.04
VPS13A-208ENST00000423463 MFSD4BQ5TF39 518 aa2.28□□□□□ -2.04
VPS13A-208ENST00000423463 FAM69BQ5VUD6 431 aa2.28□□□□□ -2.04
VPS13A-208ENST00000423463 ADNP2Q6IQ32 1131 aa2.28□□□□□ -2.04
VPS13A-208ENST00000423463 CDC73Q6P1J9 531 aa2.28□□□□□ -2.04
VPS13A-208ENST00000423463 QSOX2Q6ZRP7 698 aa2.28□□□□□ -2.04
VPS13A-208ENST00000423463 SHISA6Q6ZSJ9 500 aa2.28□□□□□ -2.04
VPS13A-208ENST00000423463 PAGE2Q7Z2X7 111 aa2.28□□□□□ -2.04
VPS13A-208ENST00000423463 SLC46A3Q7Z3Q1 461 aa2.28□□□□□ -2.04
VPS13A-208ENST00000423463 ANKRD37Q7Z713 158 aa2.28□□□□□ -2.04
VPS13A-208ENST00000423463 EXOC3L1Q86VI1 746 aa2.28□□□□□ -2.04
VPS13A-208ENST00000423463 METTL4Q8N3J2 472 aa2.28□□□□□ -2.04
VPS13A-208ENST00000423463 OR52B6Q8NGF0 335 aa2.28□□□□□ -2.04
VPS13A-208ENST00000423463 M1APQ8TC57 530 aa2.28□□□□□ -2.04
VPS13A-208ENST00000423463 TCP10LQ8TDR4 215 aa2.28□□□□□ -2.04
VPS13A-208ENST00000423463 SELENOMQ8WWX9 145 aa2.28□□□□□ -2.04
VPS13A-208ENST00000423463 MED30Q96HR3 178 aa2.28□□□□□ -2.04
VPS13A-208ENST00000423463 ZIM3Q96PE6 472 aa2.28□□□□□ -2.04
VPS13A-208ENST00000423463 TMEM237Q96Q45 408 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms