RNA–Protein interactions for RNA: ENST00000415828.5

CSTF1-202, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 2

Gene CSTF1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-202ENST00000415828 DNASE1L1P49184 302 aa4.24□□□□□ -1.73
CSTF1-202ENST00000415828 FMO5P49326 533 aa4.24□□□□□ -1.73
CSTF1-202ENST00000415828 FUT6P51993 359 aa4.24□□□□□ -1.73
CSTF1-202ENST00000415828 POLR2FP61218 127 aaKnown RBP4.24□□□□□ -1.73
CSTF1-202ENST00000415828 MAT1AQ00266 395 aaKnown RBP4.24□□□□□ -1.73
CSTF1-202ENST00000415828 PDK1Q15118 436 aa4.24□□□□□ -1.73
CSTF1-202ENST00000415828 ZNHIT3Q15649 155 aaPredicted RBP4.24□□□□□ -1.73
CSTF1-202ENST00000415828 CXorf66Q5JRM2 361 aaPredicted RBP4.24□□□□□ -1.73
CSTF1-202ENST00000415828 DCST1Q5T197 706 aa4.24□□□□□ -1.73
CSTF1-202ENST00000415828 ZFAND6Q6FIF0 208 aa4.24□□□□□ -1.73
CSTF1-202ENST00000415828 FRMPD2BQ6IN97 320 aa4.24□□□□□ -1.73
CSTF1-202ENST00000415828 ADAM5Q6NVV9 412 aa4.24□□□□□ -1.73
CSTF1-202ENST00000415828 PAPD4Q6PIY7 484 aaKnown RBP4.24□□□□□ -1.73
CSTF1-202ENST00000415828 SARM1Q6SZW1 724 aa4.24□□□□□ -1.73
CSTF1-202ENST00000415828 C17orf107Q6ZR85 190 aa4.24□□□□□ -1.73
CSTF1-202ENST00000415828 HOOK3Q86VS8 718 aa4.24□□□□□ -1.73
CSTF1-202ENST00000415828 VSTM4Q8IW00 320 aa4.24□□□□□ -1.73
CSTF1-202ENST00000415828 RNF113BQ8IZP6 322 aaKnown RBP4.24□□□□□ -1.73
CSTF1-202ENST00000415828 PYROXD2Q8N2H3 581 aa4.24□□□□□ -1.73
CSTF1-202ENST00000415828 ACVR1CQ8NER5 493 aa4.24□□□□□ -1.73
CSTF1-202ENST00000415828 KBTBD8Q8NFY9 601 aa4.24□□□□□ -1.73
CSTF1-202ENST00000415828 GLYATL1Q969I3 302 aa4.24□□□□□ -1.73
CSTF1-202ENST00000415828 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.24□□□□□ -1.731e-7■■■■■ 35.3
CSTF1-202ENST00000415828 NTAN1Q96AB6 310 aa4.24□□□□□ -1.73
CSTF1-202ENST00000415828 RRNAD1Q96FB5 475 aaKnown RBP4.24□□□□□ -1.73
CSTF1-202ENST00000415828 GRAMD2BQ96HH9 432 aa4.24□□□□□ -1.73
CSTF1-202ENST00000415828 TMEM68Q96MH6 324 aa4.24□□□□□ -1.73
CSTF1-202ENST00000415828 ZNF285Q96NJ3 590 aa4.24□□□□□ -1.73
CSTF1-202ENST00000415828 FOXN4Q96NZ1 517 aa4.24□□□□□ -1.73
CSTF1-202ENST00000415828 NODALQ96S42 347 aa4.24□□□□□ -1.73
CSTF1-202ENST00000415828 SUCNR1Q9BXA5 334 aa4.24□□□□□ -1.73
CSTF1-202ENST00000415828 SPATA16Q9BXB7 569 aa4.24□□□□□ -1.73
CSTF1-202ENST00000415828 OPN3Q9H1Y3 402 aaPredicted RBP4.24□□□□□ -1.73
CSTF1-202ENST00000415828 GANQ9H2C0 597 aa4.24□□□□□ -1.73
CSTF1-202ENST00000415828 SEBOXQ9HB31 216 aaPredicted RBP4.24□□□□□ -1.73
CSTF1-202ENST00000415828 PCDH9Q9HC56 1237 aa4.24□□□□□ -1.73
CSTF1-202ENST00000415828 SIX2Q9NPC8 291 aa4.24□□□□□ -1.73
CSTF1-202ENST00000415828 ACP6Q9NPH0 428 aa4.24□□□□□ -1.73
CSTF1-202ENST00000415828 RAB20Q9NX57 234 aa4.24□□□□□ -1.73
CSTF1-202ENST00000415828 TMEM5Q9Y2B1 443 aa4.24□□□□□ -1.73
CSTF1-202ENST00000415828 PCNX3Q9H6A9 2034 aa4.24□□□□□ -1.73
CSTF1-202ENST00000415828 A0A0J9YYE9 177 aa4.23□□□□□ -1.73
CSTF1-202ENST00000415828 A0A1W2PQ09 198 aa4.23□□□□□ -1.73
CSTF1-202ENST00000415828 C1orf226A1L170 272 aa4.23□□□□□ -1.73
CSTF1-202ENST00000415828 SYNDIG1LA6NDD5 238 aa4.23□□□□□ -1.73
CSTF1-202ENST00000415828 OR2AG2A6NM03 316 aa4.23□□□□□ -1.73
CSTF1-202ENST00000415828 AGAP14A8MT82 685 aa4.23□□□□□ -1.73
CSTF1-202ENST00000415828 GPR89AB7ZAQ6 455 aa4.23□□□□□ -1.73
CSTF1-202ENST00000415828 SPINT2O43291 252 aa4.23□□□□□ -1.73
CSTF1-202ENST00000415828 PAGE4O60829 102 aa4.23□□□□□ -1.73
CSTF1-202ENST00000415828 GNA14O95837 355 aa4.23□□□□□ -1.73
CSTF1-202ENST00000415828 IGLV2-11P01706 119 aa4.23□□□□□ -1.73
CSTF1-202ENST00000415828 TRBC1P01850 177 aa4.23□□□□□ -1.73
CSTF1-202ENST00000415828 GYPCP04921 128 aa4.23□□□□□ -1.73
CSTF1-202ENST00000415828 TPM2P07951 284 aa4.23□□□□□ -1.73
CSTF1-202ENST00000415828 GPR89BP0CG08 455 aa4.23□□□□□ -1.73
CSTF1-202ENST00000415828 PRSS56P0CW18 603 aa4.23□□□□□ -1.73
CSTF1-202ENST00000415828 TPBGLP0DKB5 382 aa4.23□□□□□ -1.73
CSTF1-202ENST00000415828 POU2F1P14859 743 aa4.23□□□□□ -1.73
CSTF1-202ENST00000415828 MYOD1P15172 320 aa4.23□□□□□ -1.73
CSTF1-202ENST00000415828 VCLP18206 1134 aa4.23□□□□□ -1.73
CSTF1-202ENST00000415828 MT3P25713 68 aa4.23□□□□□ -1.73
CSTF1-202ENST00000415828 MAXP61244 160 aa4.23□□□□□ -1.73
CSTF1-202ENST00000415828 ISL1P61371 349 aa4.23□□□□□ -1.73
CSTF1-202ENST00000415828 AP1S1P61966 158 aa4.23□□□□□ -1.73
CSTF1-202ENST00000415828 SNRPFP62306 86 aaKnown RBP4.23□□□□□ -1.73
CSTF1-202ENST00000415828 PRAMEP78395 509 aa4.23□□□□□ -1.73
CSTF1-202ENST00000415828 IFI35P80217 286 aaPredicted RBP4.23□□□□□ -1.73
CSTF1-202ENST00000415828 SLC10A7Q0GE19 358 aa4.23□□□□□ -1.73
CSTF1-202ENST00000415828 KRT81Q14533 505 aa4.23□□□□□ -1.73
CSTF1-202ENST00000415828 TAF9Q16594 264 aa4.23□□□□□ -1.73
CSTF1-202ENST00000415828 SFT2D3Q587I9 215 aa4.23□□□□□ -1.73
CSTF1-202ENST00000415828 GKAP1Q5VSY0 366 aaPredicted RBP4.23□□□□□ -1.73
CSTF1-202ENST00000415828 TAF3Q5VWG9 929 aa4.23□□□□□ -1.73
CSTF1-202ENST00000415828 C11orf71Q6IPW1 123 aa4.23□□□□□ -1.73
CSTF1-202ENST00000415828 GBP6Q6ZN66 633 aa4.23□□□□□ -1.73
CSTF1-202ENST00000415828 RGS9BPQ6ZS82 235 aa4.23□□□□□ -1.73
CSTF1-202ENST00000415828 INTS8Q75QN2 995 aaKnown RBP4.23□□□□□ -1.73
CSTF1-202ENST00000415828 ZNF771Q7L3S4 317 aaPredicted RBP4.23□□□□□ -1.73
CSTF1-202ENST00000415828 BNIPLQ7Z465 357 aa4.23□□□□□ -1.73
CSTF1-202ENST00000415828 AMIGO1Q86WK6 493 aa4.23□□□□□ -1.73
CSTF1-202ENST00000415828 TMEM219Q86XT9 240 aa4.23□□□□□ -1.73
CSTF1-202ENST00000415828 LSMEM1Q8N8F7 131 aa4.23□□□□□ -1.73
CSTF1-202ENST00000415828 RTL3Q8N8U3 475 aaKnown RBP4.23□□□□□ -1.73
CSTF1-202ENST00000415828 TTC29Q8NA56 475 aaPredicted RBP4.23□□□□□ -1.73
CSTF1-202ENST00000415828 GPR26Q8NDV2 337 aa4.23□□□□□ -1.73
CSTF1-202ENST00000415828 FBXL13Q8NEE6 735 aa4.23□□□□□ -1.73
CSTF1-202ENST00000415828 NEK11Q8NG66 645 aa4.23□□□□□ -1.73
CSTF1-202ENST00000415828 OR13A1Q8NGR1 328 aa4.23□□□□□ -1.73
CSTF1-202ENST00000415828 NEIL3Q8TAT5 605 aa4.23□□□□□ -1.73
CSTF1-202ENST00000415828 ABTB1Q969K4 478 aaPredicted RBP4.23□□□□□ -1.73
CSTF1-202ENST00000415828 LRRC58Q96CX6 371 aa4.23□□□□□ -1.73
CSTF1-202ENST00000415828 TBC1D31Q96DN5 1066 aa4.23□□□□□ -1.73
CSTF1-202ENST00000415828 B9D2Q9BPU9 175 aa4.23□□□□□ -1.73
CSTF1-202ENST00000415828 SFXN3Q9BWM7 321 aa4.23□□□□□ -1.73
CSTF1-202ENST00000415828 LRRC19Q9H756 370 aa4.23□□□□□ -1.73
CSTF1-202ENST00000415828 RANGRFQ9HD47 186 aaPredicted RBP4.23□□□□□ -1.73
CSTF1-202ENST00000415828 UBE2TQ9NPD8 197 aaPredicted RBP4.23□□□□□ -1.73
CSTF1-202ENST00000415828 MDFICQ9P1T7 246 aa4.23□□□□□ -1.73
CSTF1-202ENST00000415828 DNAJC12Q9UKB3 198 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms