RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 DND1Q8IYX4 353 aaKnown RBP13.36□□□□□ -0.27
SGCE-202ENST00000415788 EXTL1Q92935 676 aa13.36□□□□□ -0.27
SGCE-202ENST00000415788 SLC38A4Q969I6 547 aa13.36□□□□□ -0.27
SGCE-202ENST00000415788 C16orf58Q96GQ5 468 aa13.36□□□□□ -0.27
SGCE-202ENST00000415788 SMAD5Q99717 465 aaKnown RBP13.36□□□□□ -0.27
SGCE-202ENST00000415788 MRTO4Q9UKD2 239 aaKnown RBP13.36□□□□□ -0.27
SGCE-202ENST00000415788 OR10H1Q9Y4A9 318 aa13.36□□□□□ -0.27
SGCE-202ENST00000415788 GMPPBQ9Y5P6 360 aa13.36□□□□□ -0.27
SGCE-202ENST00000415788 METTL15A6NJ78 407 aa13.35□□□□□ -0.27
SGCE-202ENST00000415788 ACP2P11117 423 aa13.35□□□□□ -0.27
SGCE-202ENST00000415788 CD36P16671 472 aa13.35□□□□□ -0.27
SGCE-202ENST00000415788 NAGAP17050 411 aa13.35□□□□□ -0.27
SGCE-202ENST00000415788 FMO3P31513 532 aa13.35□□□□□ -0.27
SGCE-202ENST00000415788 GABRA3P34903 492 aa13.35□□□□□ -0.27
SGCE-202ENST00000415788 TRHRP34981 398 aaPredicted RBP13.35□□□□□ -0.27
SGCE-202ENST00000415788 MAN2A2P49641 1150 aa13.35□□□□□ -0.27
SGCE-202ENST00000415788 SSR4P51571 173 aa13.35□□□□□ -0.27
SGCE-202ENST00000415788 MFAP5Q13361 173 aa13.35□□□□□ -0.27
SGCE-202ENST00000415788 SF3B4Q15427 424 aaKnown RBP eCLIP13.35□□□□□ -0.27
SGCE-202ENST00000415788 DUSP5Q16690 384 aa13.35□□□□□ -0.27
SGCE-202ENST00000415788 FCRLBQ6BAA4 426 aa13.35□□□□□ -0.27
SGCE-202ENST00000415788 NPSR1Q6W5P4 371 aa13.35□□□□□ -0.27
SGCE-202ENST00000415788 TSPYL5Q86VY4 417 aaPredicted RBP13.35□□□□□ -0.27
SGCE-202ENST00000415788 CALHM3Q86XJ0 350 aa13.35□□□□□ -0.27
SGCE-202ENST00000415788 GPALPP1Q8IXQ4 340 aa13.35□□□□□ -0.27
SGCE-202ENST00000415788 POC5Q8NA72 575 aa13.35□□□□□ -0.27
SGCE-202ENST00000415788 SLC16A11Q8NCK7 471 aa13.35□□□□□ -0.27
SGCE-202ENST00000415788 ZNF540Q8NDQ6 660 aa13.35□□□□□ -0.27
SGCE-202ENST00000415788 GPR151Q8TDV0 419 aa13.35□□□□□ -0.27
SGCE-202ENST00000415788 TM9SF4Q92544 642 aa13.35□□□□□ -0.27
SGCE-202ENST00000415788 OR7D2Q96RA2 312 aa13.35□□□□□ -0.27
SGCE-202ENST00000415788 RASL10BQ96S79 203 aa13.35□□□□□ -0.27
SGCE-202ENST00000415788 CPPED1Q9BRF8 314 aaPredicted RBP13.35□□□□□ -0.27
SGCE-202ENST00000415788 YIPF4Q9BSR8 244 aa13.35□□□□□ -0.27
SGCE-202ENST00000415788 NXF2Q9GZY0 626 aaKnown RBP13.35□□□□□ -0.27
SGCE-202ENST00000415788 RNF32Q9H0A6 362 aa13.35□□□□□ -0.27
SGCE-202ENST00000415788 DCSTAMPQ9H295 470 aa13.35□□□□□ -0.27
SGCE-202ENST00000415788 OR51I1Q9H343 314 aa13.35□□□□□ -0.27
SGCE-202ENST00000415788 ABCB10Q9NRK6 738 aa13.35□□□□□ -0.27
SGCE-202ENST00000415788 EXD2Q9NVH0 621 aa13.35□□□□□ -0.27
SGCE-202ENST00000415788 TUBD1Q9UJT1 453 aa13.35□□□□□ -0.27
SGCE-202ENST00000415788 RBMX2Q9Y388 322 aaKnown RBP13.35□□□□□ -0.27
SGCE-202ENST00000415788 CENPBD1B2RD01 187 aa13.34□□□□□ -0.27
SGCE-202ENST00000415788 FAM20BO75063 409 aa13.34□□□□□ -0.27
SGCE-202ENST00000415788 NME6O75414 186 aaPredicted RBP13.34□□□□□ -0.27
SGCE-202ENST00000415788 AK1P00568 194 aa13.34□□□□□ -0.27
SGCE-202ENST00000415788 GPX2P18283 190 aa13.34□□□□□ -0.27
SGCE-202ENST00000415788 PRKACGP22612 351 aa13.34□□□□□ -0.27
SGCE-202ENST00000415788 KRT20P35900 424 aa13.34□□□□□ -0.27
SGCE-202ENST00000415788 TGFBR2P37173 567 aa13.34□□□□□ -0.27
SGCE-202ENST00000415788 CASRP41180 1078 aa13.34□□□□□ -0.27
SGCE-202ENST00000415788 CRATP43155 626 aa13.34□□□□□ -0.27
SGCE-202ENST00000415788 MVDP53602 400 aa13.34□□□□□ -0.27
SGCE-202ENST00000415788 PSMD4P55036 377 aaKnown RBP13.34□□□□□ -0.27
SGCE-202ENST00000415788 RPS26P62854 115 aaKnown RBP13.34□□□□□ -0.27
SGCE-202ENST00000415788 PRKCDQ05655 676 aa13.34□□□□□ -0.27
SGCE-202ENST00000415788 RGNQ15493 299 aa13.34□□□□□ -0.27
SGCE-202ENST00000415788 ANKRD34AQ69YU3 496 aa13.34□□□□□ -0.27
SGCE-202ENST00000415788 KDM4DQ6B0I6 523 aa13.34□□□□□ -0.27
SGCE-202ENST00000415788 USP43Q70EL4 1123 aa13.34□□□□□ -0.27
SGCE-202ENST00000415788 TMEM156Q8N614 296 aa13.34□□□□□ -0.27
SGCE-202ENST00000415788 COX18Q8N8Q8 333 aa13.34□□□□□ -0.27
SGCE-202ENST00000415788 ASB15Q8WXK1 588 aa13.34□□□□□ -0.27
SGCE-202ENST00000415788 PROX1Q92786 737 aa13.34□□□□□ -0.27
SGCE-202ENST00000415788 ARHGAP9Q9BRR9 750 aa13.34□□□□□ -0.27
SGCE-202ENST00000415788 SERHL2Q9H4I8 314 aa13.34□□□□□ -0.27
SGCE-202ENST00000415788 SIAEQ9HAT2 523 aa13.34□□□□□ -0.27
SGCE-202ENST00000415788 POLE4Q9NR33 117 aa13.34□□□□□ -0.27
SGCE-202ENST00000415788 CBLCQ9ULV8 474 aa13.34□□□□□ -0.27
SGCE-202ENST00000415788 SAMD4AQ9UPU9 718 aaKnown RBP13.34□□□□□ -0.27
SGCE-202ENST00000415788 CELSR3Q9NYQ7 3312 aa13.33□□□□□ -0.27
SGCE-202ENST00000415788 FAM172BPA6NC97 362 aa13.33□□□□□ -0.27
SGCE-202ENST00000415788 MAN1A2O60476 641 aa13.33□□□□□ -0.27
SGCE-202ENST00000415788 SNX4O95219 450 aa13.33□□□□□ -0.27
SGCE-202ENST00000415788 FADS2O95864 444 aaKnown RBP13.33□□□□□ -0.27
SGCE-202ENST00000415788 SERPINA1P01009 418 aa13.33□□□□□ -0.27
SGCE-202ENST00000415788 ABCD3P28288 659 aa13.33□□□□□ -0.27
SGCE-202ENST00000415788 CASP3P42574 277 aa13.33□□□□□ -0.27
SGCE-202ENST00000415788 CLK1P49759 484 aaKnown RBP13.33□□□□□ -0.27
SGCE-202ENST00000415788 CLK3P49761 638 aaKnown RBP13.33□□□□□ -0.27
SGCE-202ENST00000415788 DEFA1P59665 94 aa13.33□□□□□ -0.27
SGCE-202ENST00000415788 DEFA3P59666 94 aa13.33□□□□□ -0.27
SGCE-202ENST00000415788 IFITM2Q01629 132 aa13.33□□□□□ -0.27
SGCE-202ENST00000415788 PLCXD2Q0VAA5 305 aa13.33□□□□□ -0.27
SGCE-202ENST00000415788 MAD2L1BPQ15013 274 aaPredicted RBP13.33□□□□□ -0.27
SGCE-202ENST00000415788 NNATQ16517 81 aa13.33□□□□□ -0.27
SGCE-202ENST00000415788 DECR1Q16698 335 aa13.33□□□□□ -0.27
SGCE-202ENST00000415788 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.33□□□□□ -0.277e-15■■□□□ 14.4
SGCE-202ENST00000415788 TNFAIP8L2Q6P589 184 aaPredicted RBP13.33□□□□□ -0.27
SGCE-202ENST00000415788 IGFL2Q6UWQ7 119 aa13.33□□□□□ -0.27
SGCE-202ENST00000415788 WDR53Q7Z5U6 358 aaPredicted RBP13.33□□□□□ -0.27
SGCE-202ENST00000415788 SLC34A3Q8N130 599 aa13.33□□□□□ -0.27
SGCE-202ENST00000415788 BEST3Q8N1M1 668 aa13.33□□□□□ -0.27
SGCE-202ENST00000415788 OR5D16Q8NGK9 328 aa13.33□□□□□ -0.27
SGCE-202ENST00000415788 OR2B2Q9GZK3 357 aa13.33□□□□□ -0.27
SGCE-202ENST00000415788 RIBC2Q9H4K1 309 aa13.33□□□□□ -0.27
SGCE-202ENST00000415788 CCDC59Q9P031 241 aaKnown RBP13.33□□□□□ -0.27
SGCE-202ENST00000415788 NDRG4Q9ULP0 352 aaKnown RBP13.33□□□□□ -0.27
SGCE-202ENST00000415788 LIPT1Q9Y234 373 aa13.33□□□□□ -0.27
SGCE-202ENST00000415788 ZNF451Q9Y4E5 1061 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms