RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 SIRT3Q9NTG7 399 aaPredicted RBP17.13■□□□□ 0.33
UBXN4-202ENST00000415164 GIMAP2Q9UG22 337 aa17.13■□□□□ 0.33
UBXN4-202ENST00000415164 SONP18583 2426 aaKnown RBP17.13■□□□□ 0.33
UBXN4-202ENST00000415164 NPIPB8E9PQR5 432 aa17.12■□□□□ 0.33
UBXN4-202ENST00000415164 KIF2AO00139 706 aaPredicted RBP17.12■□□□□ 0.33
UBXN4-202ENST00000415164 ABCD4O14678 606 aa17.12■□□□□ 0.33
UBXN4-202ENST00000415164 LSM1O15116 133 aaKnown RBP17.12■□□□□ 0.33
UBXN4-202ENST00000415164 TLX2O43763 284 aaPredicted RBP17.12■□□□□ 0.33
UBXN4-202ENST00000415164 PRKCAP17252 672 aa17.12■□□□□ 0.33
UBXN4-202ENST00000415164 NUDT6P53370 316 aa17.12■□□□□ 0.33
UBXN4-202ENST00000415164 RASGEF1BQ0VAM2 473 aa17.12■□□□□ 0.33
UBXN4-202ENST00000415164 SELENBP1Q13228 472 aa17.12■□□□□ 0.33
UBXN4-202ENST00000415164 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.12■□□□□ 0.33
UBXN4-202ENST00000415164 TDRPQ86YL5 185 aa17.12■□□□□ 0.33
UBXN4-202ENST00000415164 ZNF100Q8IYN0 542 aa17.12■□□□□ 0.33
UBXN4-202ENST00000415164 TOR1AIP2Q8NFQ8 470 aa17.12■□□□□ 0.33
UBXN4-202ENST00000415164 AGR3Q8TD06 166 aa17.12■□□□□ 0.33
UBXN4-202ENST00000415164 GPR119Q8TDV5 335 aa17.12■□□□□ 0.33
UBXN4-202ENST00000415164 FCRL1Q96LA6 429 aa17.12■□□□□ 0.33
UBXN4-202ENST00000415164 ZNF300Q96RE9 604 aaPredicted RBP17.12■□□□□ 0.33
UBXN4-202ENST00000415164 PSD2Q9BQI7 771 aa17.12■□□□□ 0.33
UBXN4-202ENST00000415164 RHOXF2Q9BQY4 288 aa17.12■□□□□ 0.33
UBXN4-202ENST00000415164 RHNO1Q9BSD3 238 aa17.12■□□□□ 0.33
UBXN4-202ENST00000415164 ACTRT3Q9BYD9 372 aa17.12■□□□□ 0.33
UBXN4-202ENST00000415164 TUBB1Q9H4B7 451 aa17.12■□□□□ 0.33
UBXN4-202ENST00000415164 L2HGDHQ9H9P8 463 aa17.12■□□□□ 0.33
UBXN4-202ENST00000415164 GP6Q9HCN6 339 aa17.12■□□□□ 0.33
UBXN4-202ENST00000415164 POU2F3Q9UKI9 436 aa17.12■□□□□ 0.33
UBXN4-202ENST00000415164 ICAM5Q9UMF0 924 aa17.12■□□□□ 0.33
UBXN4-202ENST00000415164 TMED5Q9Y3A6 229 aa17.12■□□□□ 0.33
UBXN4-202ENST00000415164 KCNE3Q9Y6H6 103 aa17.12■□□□□ 0.33
UBXN4-202ENST00000415164 TMEM233B4DJY2 109 aa17.11■□□□□ 0.33
UBXN4-202ENST00000415164 SCAMP2O15127 329 aaKnown RBP17.11■□□□□ 0.33
UBXN4-202ENST00000415164 CFLARO15519 480 aa17.11■□□□□ 0.33
UBXN4-202ENST00000415164 BCKDHAP12694 445 aa17.11■□□□□ 0.33
UBXN4-202ENST00000415164 SOAT1P35610 550 aa17.11■□□□□ 0.33
UBXN4-202ENST00000415164 OR3A2P47893 321 aa17.11■□□□□ 0.33
UBXN4-202ENST00000415164 CCT3P49368 545 aaKnown RBP17.11■□□□□ 0.33
UBXN4-202ENST00000415164 SUMO3P55854 103 aaPredicted RBP17.11■□□□□ 0.33
UBXN4-202ENST00000415164 QPRTQ15274 297 aa17.11■□□□□ 0.33
UBXN4-202ENST00000415164 CHRFAM7AQ494W8 412 aa17.11■□□□□ 0.33
UBXN4-202ENST00000415164 KLHL26Q53HC5 615 aa17.11■□□□□ 0.33
UBXN4-202ENST00000415164 KANK2Q63ZY3 851 aa17.11■□□□□ 0.33
UBXN4-202ENST00000415164 Q6ZT83 130 aa17.11■□□□□ 0.33
UBXN4-202ENST00000415164 PHC2Q8IXK0 858 aa17.11■□□□□ 0.33
UBXN4-202ENST00000415164 C4orf33Q8N1A6 199 aa17.11■□□□□ 0.33
UBXN4-202ENST00000415164 UBE2J2Q8N2K1 259 aa17.11■□□□□ 0.33
UBXN4-202ENST00000415164 OR56A1Q8NGH5 318 aa17.11■□□□□ 0.33
UBXN4-202ENST00000415164 OR5AK3PQ8NH89 298 aa17.11■□□□□ 0.33
UBXN4-202ENST00000415164 UBLCP1Q8WVY7 318 aaPredicted RBP17.11■□□□□ 0.33
UBXN4-202ENST00000415164 HTRA1Q92743 480 aa17.11■□□□□ 0.33
UBXN4-202ENST00000415164 ARL8AQ96BM9 186 aa17.11■□□□□ 0.33
UBXN4-202ENST00000415164 MTERF3Q96E29 417 aa17.11■□□□□ 0.33
UBXN4-202ENST00000415164 QRSL1Q9H0R6 528 aaKnown RBP17.11■□□□□ 0.33
UBXN4-202ENST00000415164 A8MV72 311 aaPredicted RBP17.1■□□□□ 0.33
UBXN4-202ENST00000415164 TMEM114B3SHH9 223 aa17.1■□□□□ 0.33
UBXN4-202ENST00000415164 PIP5K1BO14986 540 aa17.1■□□□□ 0.33
UBXN4-202ENST00000415164 GPRIN2O60269 458 aa17.1■□□□□ 0.33
UBXN4-202ENST00000415164 PEX11AO75192 247 aa17.1■□□□□ 0.33
UBXN4-202ENST00000415164 C6orf47O95873 294 aa17.1■□□□□ 0.33
UBXN4-202ENST00000415164 IGHV3-9P01782 118 aa17.1■□□□□ 0.33
UBXN4-202ENST00000415164 LAMP1P11279 417 aa17.1■□□□□ 0.33
UBXN4-202ENST00000415164 UBL4AP11441 157 aa17.1■□□□□ 0.33
UBXN4-202ENST00000415164 GGT1P19440 569 aa17.1■□□□□ 0.33
UBXN4-202ENST00000415164 EDNRAP25101 427 aa17.1■□□□□ 0.33
UBXN4-202ENST00000415164 MAPK1P28482 360 aa17.1■□□□□ 0.33
UBXN4-202ENST00000415164 CRHR1P34998 444 aa17.1■□□□□ 0.33
UBXN4-202ENST00000415164 ATP12AP54707 1039 aa17.1■□□□□ 0.33
UBXN4-202ENST00000415164 RAC3P60763 192 aa17.1■□□□□ 0.33
UBXN4-202ENST00000415164 CBFBQ13951 182 aa17.1■□□□□ 0.33
UBXN4-202ENST00000415164 HIPK1Q86Z02 1210 aa17.1■□□□□ 0.33
UBXN4-202ENST00000415164 TWIST2Q8WVJ9 160 aa17.1■□□□□ 0.33
UBXN4-202ENST00000415164 DNAJA3Q96EY1 480 aa17.1■□□□□ 0.33
UBXN4-202ENST00000415164 MRGPRX4Q96LA9 322 aa17.1■□□□□ 0.33
UBXN4-202ENST00000415164 ADAD1Q96M93 576 aaKnown RBP17.1■□□□□ 0.33
UBXN4-202ENST00000415164 USB1Q9BQ65 265 aaKnown RBP17.1■□□□□ 0.33
UBXN4-202ENST00000415164 C1orf50Q9BV19 199 aa17.1■□□□□ 0.33
UBXN4-202ENST00000415164 GATA5Q9BWX5 397 aaPredicted RBP17.1■□□□□ 0.33
UBXN4-202ENST00000415164 ATP6V1HQ9UI12 483 aa17.1■□□□□ 0.33
UBXN4-202ENST00000415164 MID2Q9UJV3 735 aa17.1■□□□□ 0.33
UBXN4-202ENST00000415164 B3GALT5Q9Y2C3 310 aa17.1■□□□□ 0.33
UBXN4-202ENST00000415164 DTNAQ9Y4J8 743 aa17.1■□□□□ 0.33
UBXN4-202ENST00000415164 DNAJC15Q9Y5T4 150 aa17.1■□□□□ 0.33
UBXN4-202ENST00000415164 ACTL7BQ9Y614 415 aa17.1■□□□□ 0.33
UBXN4-202ENST00000415164 IGHV4-30-2A0A087WSY4 118 aa17.09■□□□□ 0.33
UBXN4-202ENST00000415164 FAM234BA2RU67 622 aa17.09■□□□□ 0.33
UBXN4-202ENST00000415164 SHISA9B4DS77 424 aa17.09■□□□□ 0.33
UBXN4-202ENST00000415164 SMAD9O15198 467 aaKnown RBP17.09■□□□□ 0.33
UBXN4-202ENST00000415164 ZNF264O43296 627 aa17.09■□□□□ 0.33
UBXN4-202ENST00000415164 RAD51DO75771 328 aa17.09■□□□□ 0.33
UBXN4-202ENST00000415164 CD8AP01732 235 aa17.09■□□□□ 0.33
UBXN4-202ENST00000415164 SHBGP04278 402 aa17.09■□□□□ 0.33
UBXN4-202ENST00000415164 KRT16P08779 473 aa17.09■□□□□ 0.33
UBXN4-202ENST00000415164 KRT4P19013 534 aa17.09■□□□□ 0.33
UBXN4-202ENST00000415164 RPL3P39023 403 aaKnown RBP17.09■□□□□ 0.33
UBXN4-202ENST00000415164 CHRNEQ04844 493 aa17.09■□□□□ 0.33
UBXN4-202ENST00000415164 MLC1Q15049 377 aa17.09■□□□□ 0.33
UBXN4-202ENST00000415164 GPR68Q15743 365 aa17.09■□□□□ 0.33
UBXN4-202ENST00000415164 TIGD2Q4W5G0 525 aa17.09■□□□□ 0.33
UBXN4-202ENST00000415164 EXOSC6Q5RKV6 272 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms