RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 PRSS42Q7Z5A4 293 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 ABI3BPQ7Z7G0 1075 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 PTOV1Q86YD1 416 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 HPS6Q86YV9 775 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 LACC1Q8IV20 430 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 CTAGE3PQ8IX95 158 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 ZNF461Q8TAF7 563 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 LKAAEAR1Q8TD35 194 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 ASZ1Q8WWH4 475 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 RASSF5Q8WWW0 418 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 SEPT8Q92599 483 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 DNASE1L2Q92874 299 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 ST6GALNAC6Q969X2 333 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 FAF2Q96CS3 445 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 CCDC126Q96EE4 140 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 ELMOD3Q96FG2 381 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 DNAJC1Q96KC8 554 aaKnown RBP3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 PRMT6Q96LA8 375 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 CNBD2Q96M20 576 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 RNF157Q96PX1 679 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 CPXM1Q96SM3 734 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 SORT1Q99523 831 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 CTRCQ99895 268 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 HOPXQ9BPY8 73 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 EBF4Q9BQW3 602 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 C11orf70Q9BRQ4 267 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 ZNF670Q9BS34 389 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 C1QTNF1Q9BXJ1 281 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 FTHL17Q9BXU8 183 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 IL22Q9GZX6 179 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 GFRA4Q9GZZ7 299 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 UPF3AQ9H1J1 476 aaKnown RBP3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 FZD8Q9H461 694 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 OSGEPL1Q9H4B0 414 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 RPF2Q9H7B2 306 aaKnown RBP3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 SMYD3Q9H7B4 428 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 COG4Q9H9E3 785 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 WDR41Q9HAD4 459 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 CXorf21Q9HAI6 301 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 SLC38A7Q9NVC3 462 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 SETD4Q9NVD3 440 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 TXNDC16Q9P2K2 825 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 KCNN3Q9UGI6 736 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 IL20RAQ9UHF4 553 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 SLC9A8Q9Y2E8 581 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 IFT52Q9Y366 437 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 RNF11Q9Y3C5 154 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 UGT2A1Q9Y4X1 527 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 MYH14Q7Z406 1995 aaKnown RBP3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 DOT1LQ8TEK3 1739 aa3.3□□□□□ -1.88
HMGB3P23-201ENST00000414981 SSC5DA1L4H1 1573 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 MN1Q10571 1320 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 A0A0U1RQS6 177 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 A0A0U1RQV5 110 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 SAGE2PA6NJ88 616 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 DUXAA6NLW8 204 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 MEI4A8MW99 385 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 CLDN25C9JDP6 229 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 K7EQM0 130 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 PSMD12O00232 456 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 NR5A2O00482 541 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 PSMD3O43242 534 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 ZNF264O43296 627 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 MITFO75030 526 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 NDUFS6O75380 124 aaKnown RBP3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 CRCPO75575 148 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 RBBP9O75884 186 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 RSL1D1O76021 490 aaKnown RBP3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 UFL1O94874 794 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 SORBS2O94875 1100 aaKnown RBP3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 TRUB2O95900 331 aaKnown RBP3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 BCL10O95999 233 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 GPIP06744 558 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 SRPRAP08240 638 aaKnown RBP3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 KRT19P08727 400 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 IGFBP1P08833 259 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 HSD17B1P14061 328 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 TCF4P15884 667 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 GNB3P16520 340 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 PGAM1P18669 254 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 TNNI1P19237 187 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 SRMP19623 302 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 NCF2P19878 526 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 TCN1P20061 433 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 PSMA2P25787 234 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 IL12AP29459 219 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 RRM2P31350 389 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 TIA1P31483 386 aaKnown RBP eCLIP3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 TUFMP49411 452 aaKnown RBP3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 CSRP3P50461 194 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 NUDT2P50583 147 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 HLCSP50747 726 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 RPL14P50914 215 aaKnown RBP3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 THOP1P52888 689 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 LIMK2P53671 638 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 ATP5IP56385 69 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 DNAJB13P59910 316 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 CD81P60033 236 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 GABARAPL2P60520 117 aa3.29□□□□□ -1.88
HMGB3P23-201ENST00000414981 POLR2GP62487 172 aaKnown RBP eCLIP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 151.5 ms