RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 COL5A1P20908 1838 aaPredicted RBP12.53□□□□□ -0.4
LIMS1-205ENST00000410093 EP300Q09472 2414 aaPredicted RBP12.53□□□□□ -0.4
LIMS1-205ENST00000410093 MN1Q10571 1320 aaPredicted RBP12.53□□□□□ -0.4
LIMS1-205ENST00000410093 IGHV5-51A0A0C4DH38 117 aa12.52□□□□□ -0.4
LIMS1-205ENST00000410093 BHLHE40O14503 412 aa12.52□□□□□ -0.4
LIMS1-205ENST00000410093 DSCR3O14972 297 aa12.52□□□□□ -0.4
LIMS1-205ENST00000410093 LRP3O75074 770 aa12.52□□□□□ -0.4
LIMS1-205ENST00000410093 OR2B3O76000 313 aa12.52□□□□□ -0.4
LIMS1-205ENST00000410093 IFNGP01579 166 aa12.52□□□□□ -0.4
LIMS1-205ENST00000410093 GKN3PP0CG01 181 aa12.52□□□□□ -0.4
LIMS1-205ENST00000410093 CT45A8P0DMV1 189 aa12.52□□□□□ -0.4
LIMS1-205ENST00000410093 CT45A9P0DMV2 189 aa12.52□□□□□ -0.4
LIMS1-205ENST00000410093 PRG2P13727 222 aa12.52□□□□□ -0.4
LIMS1-205ENST00000410093 PNLIPP16233 465 aa12.52□□□□□ -0.4
LIMS1-205ENST00000410093 FGF9P31371 208 aaPredicted RBP12.52□□□□□ -0.4
LIMS1-205ENST00000410093 SLC6A6P31641 620 aa12.52□□□□□ -0.4
LIMS1-205ENST00000410093 GABRA5P31644 462 aa12.52□□□□□ -0.4
LIMS1-205ENST00000410093 ETV5P41161 510 aa12.52□□□□□ -0.4
LIMS1-205ENST00000410093 ACAA2P42765 397 aaKnown RBP12.52□□□□□ -0.4
LIMS1-205ENST00000410093 PPICP45877 212 aa12.52□□□□□ -0.4
LIMS1-205ENST00000410093 PPM1FP49593 454 aaPredicted RBP12.52□□□□□ -0.4
LIMS1-205ENST00000410093 ETV1P50549 477 aa12.52□□□□□ -0.4
LIMS1-205ENST00000410093 LSM11P83369 360 aaKnown RBP eCLIP12.52□□□□□ -0.4
LIMS1-205ENST00000410093 SPEM2Q0P670 501 aa12.52□□□□□ -0.4
LIMS1-205ENST00000410093 POU4F2Q12837 409 aa12.52□□□□□ -0.4
LIMS1-205ENST00000410093 TRIM16LQ309B1 348 aa12.52□□□□□ -0.4
LIMS1-205ENST00000410093 ANKDD1AQ495B1 522 aa12.52□□□□□ -0.4
LIMS1-205ENST00000410093 CT45A2Q5DJT8 189 aa12.52□□□□□ -0.4
LIMS1-205ENST00000410093 SPANXN2Q5MJ10 180 aa12.52□□□□□ -0.4
LIMS1-205ENST00000410093 CLEC12AQ5QGZ9 265 aa12.52□□□□□ -0.4
LIMS1-205ENST00000410093 TMPRSS11AQ6ZMR5 421 aa12.52□□□□□ -0.4
LIMS1-205ENST00000410093 MEPCEQ7L2J0 689 aaKnown RBP12.52□□□□□ -0.4
LIMS1-205ENST00000410093 CXXC5Q7LFL8 322 aaKnown RBP12.52□□□□□ -0.4
LIMS1-205ENST00000410093 NUP54Q7Z3B4 507 aa12.52□□□□□ -0.4
LIMS1-205ENST00000410093 GPR135Q8IZ08 494 aa12.52□□□□□ -0.4
LIMS1-205ENST00000410093 CENPSQ8N2Z9 138 aa12.52□□□□□ -0.4
LIMS1-205ENST00000410093 D2HGDHQ8N465 521 aa12.52□□□□□ -0.4
LIMS1-205ENST00000410093 RCBTB1Q8NDN9 531 aa12.52□□□□□ -0.4
LIMS1-205ENST00000410093 LOXL4Q96JB6 756 aa12.52□□□□□ -0.4
LIMS1-205ENST00000410093 SAMD8Q96LT4 415 aa12.52□□□□□ -0.4
LIMS1-205ENST00000410093 ASPNQ9BXN1 380 aa12.52□□□□□ -0.4
LIMS1-205ENST00000410093 CUTCQ9NTM9 273 aa12.52□□□□□ -0.4
LIMS1-205ENST00000410093 FBXO34Q9NWN3 711 aa12.52□□□□□ -0.4
LIMS1-205ENST00000410093 SIGLEC7Q9Y286 467 aa12.52□□□□□ -0.4
LIMS1-205ENST00000410093 CAB39Q9Y376 341 aaPredicted RBP12.52□□□□□ -0.4
LIMS1-205ENST00000410093 OR10H1Q9Y4A9 318 aa12.52□□□□□ -0.4
LIMS1-205ENST00000410093 CLDN16Q9Y5I7 305 aa12.52□□□□□ -0.4
LIMS1-205ENST00000410093 IGHV1OR21-1A0A087WYE8 117 aa12.52□□□□□ -0.41
LIMS1-205ENST00000410093 CENPVL1A0A0U1RR11 272 aa12.52□□□□□ -0.41
LIMS1-205ENST00000410093 IQCMA0A1B0GVH7 501 aa12.52□□□□□ -0.41
LIMS1-205ENST00000410093 A0A1B0GWA3 101 aa12.52□□□□□ -0.41
LIMS1-205ENST00000410093 SERINC4A6NH21 518 aa12.52□□□□□ -0.41
LIMS1-205ENST00000410093 RIIAD1A6NNX1 92 aa12.52□□□□□ -0.41
LIMS1-205ENST00000410093 CDC42EP2O14613 210 aa12.52□□□□□ -0.41
LIMS1-205ENST00000410093 PTP4A3O75365 173 aa12.52□□□□□ -0.41
LIMS1-205ENST00000410093 GPX5O75715 221 aa12.52□□□□□ -0.41
LIMS1-205ENST00000410093 IFNA16P05015 189 aa12.52□□□□□ -0.41
LIMS1-205ENST00000410093 ADRA2AP08913 450 aa12.52□□□□□ -0.41
LIMS1-205ENST00000410093 CKMT1AP12532 417 aa12.52□□□□□ -0.41
LIMS1-205ENST00000410093 HK1P19367 917 aa12.52□□□□□ -0.41
LIMS1-205ENST00000410093 RORAP35398 523 aa12.52□□□□□ -0.41
LIMS1-205ENST00000410093 ATP6V1E1P36543 226 aa12.52□□□□□ -0.41
LIMS1-205ENST00000410093 SLC1A3P43003 542 aa12.52□□□□□ -0.41
LIMS1-205ENST00000410093 OXA1LQ15070 435 aa12.52□□□□□ -0.41
LIMS1-205ENST00000410093 TRAM1Q15629 374 aa12.52□□□□□ -0.41
LIMS1-205ENST00000410093 ISXQ2M1V0 245 aa12.52□□□□□ -0.41
LIMS1-205ENST00000410093 DEFB133Q30KQ1 61 aa12.52□□□□□ -0.41
LIMS1-205ENST00000410093 ALG10BQ5I7T1 473 aa12.52□□□□□ -0.41
LIMS1-205ENST00000410093 ARHGAP11AQ6P4F7 1023 aa12.52□□□□□ -0.41
LIMS1-205ENST00000410093 DGAT2L6Q6ZPD8 337 aa12.52□□□□□ -0.41
LIMS1-205ENST00000410093 OR4C6Q8NH72 309 aa12.52□□□□□ -0.41
LIMS1-205ENST00000410093 C16orf52Q8NHV5 167 aa12.52□□□□□ -0.41
LIMS1-205ENST00000410093 AP3S1Q92572 193 aa12.52□□□□□ -0.41
LIMS1-205ENST00000410093 CNOT9Q92600 299 aaKnown RBP12.52□□□□□ -0.41
LIMS1-205ENST00000410093 NDC1Q9BTX1 674 aa12.52□□□□□ -0.41
LIMS1-205ENST00000410093 CNPPD1Q9BV87 410 aa12.52□□□□□ -0.41
LIMS1-205ENST00000410093 DPH1Q9BZG8 443 aa12.52□□□□□ -0.41
LIMS1-205ENST00000410093 NDEL1Q9GZM8 345 aa12.52□□□□□ -0.41
LIMS1-205ENST00000410093 C6orf62Q9GZU0 229 aaPredicted RBP12.52□□□□□ -0.41
LIMS1-205ENST00000410093 SP140LQ9H930 580 aa12.52□□□□□ -0.41
LIMS1-205ENST00000410093 C12orf10Q9HB07 376 aa12.52□□□□□ -0.41
LIMS1-205ENST00000410093 MKKSQ9NPJ1 570 aaPredicted RBP12.52□□□□□ -0.41
LIMS1-205ENST00000410093 UBQLN4Q9NRR5 601 aa12.52□□□□□ -0.41
LIMS1-205ENST00000410093 ASB6Q9NWX5 421 aa12.52□□□□□ -0.41
LIMS1-205ENST00000410093 HAO2Q9NYQ3 351 aa12.52□□□□□ -0.41
LIMS1-205ENST00000410093 TNFRSF10DQ9UBN6 386 aa12.52□□□□□ -0.41
LIMS1-205ENST00000410093 SERTAD3Q9UJW9 196 aa12.52□□□□□ -0.41
LIMS1-205ENST00000410093 ERVK-19Q9WJR5 959 aa12.52□□□□□ -0.41
LIMS1-205ENST00000410093 NTNG1Q9Y2I2 539 aa12.52□□□□□ -0.41
LIMS1-205ENST00000410093 RNF215Q9Y6U7 377 aa12.52□□□□□ -0.41
LIMS1-205ENST00000410093 H3BMH7 237 aa12.51□□□□□ -0.41
LIMS1-205ENST00000410093 TGFBR3LH3BV60 316 aa12.51□□□□□ -0.41
LIMS1-205ENST00000410093 IDH3BO43837 385 aa12.51□□□□□ -0.41
LIMS1-205ENST00000410093 PIP5K1CO60331 668 aa12.51□□□□□ -0.41
LIMS1-205ENST00000410093 UPK1BO75841 260 aa12.51□□□□□ -0.41
LIMS1-205ENST00000410093 LIMS3P0CW19 117 aa12.51□□□□□ -0.41
LIMS1-205ENST00000410093 LIMS4P0CW20 117 aa12.51□□□□□ -0.41
LIMS1-205ENST00000410093 SAGP10523 405 aaPredicted RBP12.51□□□□□ -0.41
LIMS1-205ENST00000410093 PNMTP11086 282 aa12.51□□□□□ -0.41
LIMS1-205ENST00000410093 ZNF3P17036 446 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms