RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 NPIPA5A0A0B4J1W7 369 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 A0A0J9YW62 118 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 TMEM247A6NEH6 219 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 NPIPA7E9PJI5 369 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 ETV2O00321 342 aaPredicted RBP8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 ZNF195O14628 629 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 KLF11O14901 512 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 ARHGEF9O43307 516 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 KIAA0513O60268 411 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 SNNO75324 88 aaPredicted RBP8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 CYP7B1O75881 506 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 PRKD3O94806 890 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 ATE1O95260 518 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 KRT75O95678 551 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 CGAP01215 116 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 IL6P05231 212 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 PGRP06401 933 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 NPIPA8P0DM63 369 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 AGTR1P30556 359 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 HTR3AP46098 478 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 RPS26P62854 115 aaKnown RBP8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 FAM27E3Q08E93 113 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 SKP2Q13309 424 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 QPRTQ15274 297 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 GSTA3Q16772 222 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 DEFB113Q30KQ7 82 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 BEX5Q5H9J7 111 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 SPANXN4Q5MJ08 99 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 PDZK1Q5T2W1 519 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 SAXO2Q658L1 398 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 HEPHL1Q6MZM0 1159 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 ZNF474Q6S9Z5 364 aaPredicted RBP8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 C20orf204Q6ZNR8 217 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 MSANTD1Q6ZTZ1 278 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 TGIF2LYQ8IUE0 185 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 ZNF619Q8N2I2 560 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 ZNF610Q8N9Z0 462 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 STEAP2Q8NFT2 490 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 POC1BQ8TC44 478 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 MGARPQ8TDB4 240 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 GPR119Q8TDV5 335 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 XAGE5Q8WWM1 108 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 PIGTQ969N2 578 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 ROPN1LQ96C74 230 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 OR52E6Q96RD3 313 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 KLHL4Q9C0H6 718 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 C20orf27Q9GZN8 174 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 RMND5AQ9H871 391 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 MANSC1Q9H8J5 431 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 EXOSC3Q9NQT5 275 aaKnown RBP8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 PNPOQ9NVS9 261 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 THUMPD1Q9NXG2 353 aaKnown RBP8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 KLHL28Q9NXS3 571 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 CALML5Q9NZT1 146 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 EMC3Q9P0I2 261 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 KLHL13Q9P2N7 655 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 HIVEP1P15822 2718 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 AKAP6Q13023 2319 aa8.13□□□□□ -1.11
SNORD88A-201ENST00000408314 AKAP9Q99996 3911 aa8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 MPDZO75970 2070 aa8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 CCDC154A6NI56 674 aa8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 SDHDO14521 159 aa8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 DNPH1O43598 174 aa8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 SCN2BO60939 215 aa8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 TMCC2O75069 709 aa8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 UGT2B17O75795 530 aa8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 ANP32DO95626 131 aa8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 NTN1O95631 604 aa8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 OR12D1P0DN82 309 aa8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 CD99P14209 185 aa8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 PSMB1P20618 241 aaKnown RBP8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 ENPP1P22413 925 aa8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 CCKARP32238 428 aa8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 APOBEC1P41238 236 aaKnown RBP8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 CLK1P49759 484 aaKnown RBP8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 MAP2K6P52564 334 aa8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 RAC3P60763 192 aa8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 STX1BP61266 288 aa8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 MAGOHP61326 146 aaKnown RBP8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 IRX1P78414 480 aaPredicted RBP8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 MPP2Q14168 576 aa8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 POU4F3Q15319 338 aa8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 ZSWIM7Q19AV6 140 aa8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 EXOC3L2Q2M3D2 409 aa8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 TMEM176BQ3YBM2 270 aaPredicted RBP8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 TIGD2Q4W5G0 525 aa8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 PDCD4Q53EL6 469 aaKnown RBP8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 GPAT3Q53EU6 434 aa8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 SHEQ5VZ18 495 aa8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 AP1ARQ63HQ0 302 aa8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 NXNQ6DKJ4 435 aa8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 TNFAIP8L2Q6P589 184 aaPredicted RBP8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 CBLN3Q6UW01 205 aa8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 FCRLAQ7L513 359 aa8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 ANKRD46Q86W74 232 aa8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 ARFGAP2Q8N6H7 521 aa8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 GOLGA6L1Q8N7Z2 621 aa8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 ZNF563Q8TA94 476 aa8.12□□□□□ -1.11
SNORD88A-201ENST00000408314 PIWIL2Q8TC59 973 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms