RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 ZC3H12DA2A288 527 aaKnown RBP11.9□□□□□ -0.5
HERC3-203ENST00000407637 FAM183AA6NL82 134 aa11.9□□□□□ -0.5
HERC3-203ENST00000407637 COLCA2A8K830 154 aa11.9□□□□□ -0.5
HERC3-203ENST00000407637 C2orf74A8MZ97 194 aa11.9□□□□□ -0.5
HERC3-203ENST00000407637 C1orf196B1AJZ1 125 aa11.9□□□□□ -0.5
HERC3-203ENST00000407637 GPR37L1O60883 481 aa11.9□□□□□ -0.5
HERC3-203ENST00000407637 ATP1B1P05026 303 aa11.9□□□□□ -0.5
HERC3-203ENST00000407637 SERPIND1P05546 499 aa11.9□□□□□ -0.5
HERC3-203ENST00000407637 ADH7P40394 386 aa11.9□□□□□ -0.5
HERC3-203ENST00000407637 PFN3P60673 137 aa11.9□□□□□ -0.5
HERC3-203ENST00000407637 IRF5Q13568 498 aa11.9□□□□□ -0.5
HERC3-203ENST00000407637 IL10RAQ13651 578 aa11.9□□□□□ -0.5
HERC3-203ENST00000407637 ZDHHC20Q5W0Z9 365 aa11.9□□□□□ -0.5
HERC3-203ENST00000407637 MON1AQ86VX9 555 aa11.9□□□□□ -0.5
HERC3-203ENST00000407637 MISPQ8IVT2 679 aa11.9□□□□□ -0.5
HERC3-203ENST00000407637 TMEM99Q8N816 258 aa11.9□□□□□ -0.5
HERC3-203ENST00000407637 OR2AK2Q8NG84 335 aa11.9□□□□□ -0.5
HERC3-203ENST00000407637 OR4Q3Q8NH05 313 aa11.9□□□□□ -0.5
HERC3-203ENST00000407637 ZNF671Q8TAW3 534 aa11.9□□□□□ -0.5
HERC3-203ENST00000407637 ABHD4Q8TB40 342 aa11.9□□□□□ -0.5
HERC3-203ENST00000407637 SMAP2Q8WU79 429 aaPredicted RBP11.9□□□□□ -0.5
HERC3-203ENST00000407637 MRPL38Q96DV4 380 aaKnown RBP11.9□□□□□ -0.5
HERC3-203ENST00000407637 OR51I1Q9H343 314 aa11.9□□□□□ -0.5
HERC3-203ENST00000407637 C2orf42Q9NWW7 574 aa11.9□□□□□ -0.5
HERC3-203ENST00000407637 DOCK6Q96HP0 2047 aa11.9□□□□□ -0.5
HERC3-203ENST00000407637 DNAH12Q6ZR08 3092 aa11.9□□□□□ -0.5
HERC3-203ENST00000407637 WASH3PC4AMC7 463 aa11.9□□□□□ -0.5
HERC3-203ENST00000407637 KRT33AO76009 404 aa11.9□□□□□ -0.5
HERC3-203ENST00000407637 NDUFB6O95139 128 aa11.9□□□□□ -0.5
HERC3-203ENST00000407637 F11P03951 625 aa11.9□□□□□ -0.5
HERC3-203ENST00000407637 HEXAP06865 529 aa11.9□□□□□ -0.5
HERC3-203ENST00000407637 ZNF44P15621 663 aa11.9□□□□□ -0.5
HERC3-203ENST00000407637 ACVR1BP36896 505 aa11.9□□□□□ -0.5
HERC3-203ENST00000407637 NSG1P42857 185 aa11.9□□□□□ -0.5
HERC3-203ENST00000407637 BDH1Q02338 343 aa11.9□□□□□ -0.5
HERC3-203ENST00000407637 ARSIQ5FYB1 569 aa11.9□□□□□ -0.5
HERC3-203ENST00000407637 BEX5Q5H9J7 111 aa11.9□□□□□ -0.5
HERC3-203ENST00000407637 RAB12Q6IQ22 244 aa11.9□□□□□ -0.5
HERC3-203ENST00000407637 TSSK4Q6SA08 328 aa11.9□□□□□ -0.5
HERC3-203ENST00000407637 RPTNQ6XPR3 784 aa11.9□□□□□ -0.5
HERC3-203ENST00000407637 MRGPREQ86SM8 312 aa11.9□□□□□ -0.5
HERC3-203ENST00000407637 LRRC56Q8IYG6 542 aaPredicted RBP11.9□□□□□ -0.5
HERC3-203ENST00000407637 APCDD1Q8J025 514 aa11.9□□□□□ -0.5
HERC3-203ENST00000407637 TIMP4Q99727 224 aa11.9□□□□□ -0.5
HERC3-203ENST00000407637 ACBD6Q9BR61 282 aa11.9□□□□□ -0.5
HERC3-203ENST00000407637 PINK1Q9BXM7 581 aa11.9□□□□□ -0.5
HERC3-203ENST00000407637 PLEKHA1Q9HB21 404 aa11.9□□□□□ -0.5
HERC3-203ENST00000407637 NMRK2Q9NPI5 230 aa11.9□□□□□ -0.5
HERC3-203ENST00000407637 TRIM36Q9NQ86 728 aa11.9□□□□□ -0.5
HERC3-203ENST00000407637 IL20RAQ9UHF4 553 aa11.9□□□□□ -0.5
HERC3-203ENST00000407637 TRAV14DV4A0A0A6YYC5 116 aa11.9□□□□□ -0.51
HERC3-203ENST00000407637 SAP18O00422 153 aaKnown RBP11.9□□□□□ -0.51
HERC3-203ENST00000407637 PCDH8O95206 1070 aa11.9□□□□□ -0.51
HERC3-203ENST00000407637 FURINP09958 794 aa11.9□□□□□ -0.51
HERC3-203ENST00000407637 EPXP11678 715 aa11.9□□□□□ -0.51
HERC3-203ENST00000407637 FOLR2P14207 255 aa11.9□□□□□ -0.51
HERC3-203ENST00000407637 GNSP15586 552 aa11.9□□□□□ -0.51
HERC3-203ENST00000407637 LAG3P18627 525 aa11.9□□□□□ -0.51
HERC3-203ENST00000407637 TYMPP19971 482 aa11.9□□□□□ -0.51
HERC3-203ENST00000407637 CCR7P32248 378 aa11.9□□□□□ -0.51
HERC3-203ENST00000407637 PNLIPRP2P54317 469 aa11.9□□□□□ -0.51
HERC3-203ENST00000407637 AP3S2P59780 193 aa11.9□□□□□ -0.51
HERC3-203ENST00000407637 ZNF763Q0D2J5 394 aa11.9□□□□□ -0.51
HERC3-203ENST00000407637 C10orf91Q5T1B1 145 aa11.9□□□□□ -0.51
HERC3-203ENST00000407637 VRK3Q8IV63 474 aa11.9□□□□□ -0.51
HERC3-203ENST00000407637 MMP21Q8N119 569 aa11.9□□□□□ -0.51
HERC3-203ENST00000407637 RHOVQ96L33 236 aa11.9□□□□□ -0.51
HERC3-203ENST00000407637 GAS2L1Q99501 681 aaPredicted RBP11.9□□□□□ -0.51
HERC3-203ENST00000407637 TRMT61BQ9BVS5 477 aaKnown RBP11.9□□□□□ -0.51
HERC3-203ENST00000407637 ZNF471Q9BX82 626 aaPredicted RBP11.9□□□□□ -0.51
HERC3-203ENST00000407637 ABRACLQ9P1F3 81 aa11.9□□□□□ -0.51
HERC3-203ENST00000407637 KLHL9Q9P2J3 617 aa11.9□□□□□ -0.51
HERC3-203ENST00000407637 PLEKHA6Q9Y2H5 1048 aa11.9□□□□□ -0.51
HERC3-203ENST00000407637 DMRT1Q9Y5R6 373 aa11.9□□□□□ -0.51
HERC3-203ENST00000407637 NEDD8-MDP1E9PL57 170 aa11.89□□□□□ -0.51
HERC3-203ENST00000407637 SURF4O15260 269 aa11.89□□□□□ -0.51
HERC3-203ENST00000407637 VEGFDO43915 354 aa11.89□□□□□ -0.51
HERC3-203ENST00000407637 OR4Q2P0C623 313 aa11.89□□□□□ -0.51
HERC3-203ENST00000407637 ABCD3P28288 659 aa11.89□□□□□ -0.51
HERC3-203ENST00000407637 HTR1FP30939 366 aa11.89□□□□□ -0.51
HERC3-203ENST00000407637 RIDAP52758 137 aaKnown RBP11.89□□□□□ -0.51
HERC3-203ENST00000407637 RPS13P62277 151 aaKnown RBP11.89□□□□□ -0.51
HERC3-203ENST00000407637 EEF1A1P68104 462 aaKnown RBP11.89□□□□□ -0.51
HERC3-203ENST00000407637 MAPK14Q16539 360 aa11.89□□□□□ -0.51
HERC3-203ENST00000407637 PLEKHN1Q494U1 663 aaPredicted RBP11.89□□□□□ -0.51
HERC3-203ENST00000407637 EEF1A1P5Q5VTE0 462 aa11.89□□□□□ -0.51
HERC3-203ENST00000407637 LIPJQ5W064 366 aa11.89□□□□□ -0.51
HERC3-203ENST00000407637 OLFML2AQ68BL7 652 aa11.89□□□□□ -0.51
HERC3-203ENST00000407637 OLIG3Q7RTU3 272 aa11.89□□□□□ -0.51
HERC3-203ENST00000407637 PXKQ7Z7A4 578 aa11.89□□□□□ -0.51
HERC3-203ENST00000407637 ZNF546Q86UE3 836 aa11.89□□□□□ -0.51
HERC3-203ENST00000407637 SPATA2LQ8IUW3 424 aaPredicted RBP11.89□□□□□ -0.51
HERC3-203ENST00000407637 MUC20Q8N307 709 aaPredicted RBP11.89□□□□□ -0.51
HERC3-203ENST00000407637 PPTC7Q8NI37 304 aa11.89□□□□□ -0.51
HERC3-203ENST00000407637 BRIX1Q8TDN6 353 aaKnown RBP11.89□□□□□ -0.51
HERC3-203ENST00000407637 TNFAIP8L1Q8WVP5 186 aa11.89□□□□□ -0.51
HERC3-203ENST00000407637 LRIG1Q96JA1 1093 aa11.89□□□□□ -0.51
HERC3-203ENST00000407637 UTP23Q9BRU9 249 aaKnown RBP11.89□□□□□ -0.51
HERC3-203ENST00000407637 SLC12A9Q9BXP2 914 aa11.89□□□□□ -0.51
HERC3-203ENST00000407637 CXorf36Q9H7Y0 433 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms